Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01631 ATGGCTTGGTTGCTTAGCTTGTTCTTTTTCTTTCTCGTCTCTTCTGTTACTGCTTGTGATCGTTGTATTCATCGGTCCAAAGCTACTCATTATTATGGAGATTCACCTACTTCATATGGAGGAGCATGTGGTTATGGGGATTTGGCATTGGAATTTACCAATGGCTACTTTTCAGCTGCTGTGCCTTCTCTATACAAACAAGGAGCTGGCTGTGGAGCATGTTTTCAGGTAAGATGTAAGGACAAAAGACTATGCAATACAGCAGGGGCCAAAGTGGTATTAACAGATCAAAATTATGATGGTAGAGCAGATTTTGTTCTCAGTAGAAAAGCTTTTTCAGCCATGGCTTTAAAAGGAAAAGGTCAAGAACTTTTGAATACTGGAATTGTTGATGTAGAATACAAGAGGATACCTTGTGGATACAAAAATAGAAATTTGGCCGTACGAGTTGAAGAATCAAGTTATAATCCAAATTATTTGGCTATTAAACTTTTGTACCAAGGTGGCCAAACAGAGATAGTAGCTGTCGAGATAGCCCAGGTCGGTTCATACGAATGGGTGAGCTTAAGCAGAAACTATGGGGCAGTTTGGGATACAAATAAAGTACCCCAAGGAGCATTACAAATGAGAATGGCATTTACTTCAGGATACGATGGAAAATGGGTTTGGGCAGAATATGTTCTTCCTGCTGATTGGAAAATTGGAGTGATTTACGATACTGGAGTTCAAATTTATGATATTGCTAAAGAGAGTTGCTCTGCATCACAATGTGGTGATAAACCATGGAAATAA 792 39.14 MAWLLSLFFFFLVSSVTACDRCIHRSKATHYYGDSPTSYGGACGYGDLALEFTNGYFSAAVPSLYKQGAGCGACFQVRCKDKRLCNTAGAKVVLTDQNYDGRADFVLSRKAFSAMALKGKGQELLNTGIVDVEYKRIPCGYKNRNLAVRVEESSYNPNYLAIKLLYQGGQTEIVAVEIAQVGSYEWVSLSRNYGAVWDTNKVPQGALQMRMAFTSGYDGKWVWAEYVLPADWKIGVIYDTGVQIYDIAKESCSASQCGDKPWK 263
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 53416600 53419588 - XM_039032808.1 Bhi05g01631 35841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01631 263 PANTHER EXPANSIN-LIKE A1-RELATED 5 258 - -
Bhi05g01631 263 Gene3D - 13 139 IPR036908 -
Bhi05g01631 263 PRINTS Major pollen allergen Lol pI signature 116 131 IPR005795 GO:0005576|GO:0019953
Bhi05g01631 263 PRINTS Major pollen allergen Lol pI signature 149 164 IPR005795 GO:0005576|GO:0019953
Bhi05g01631 263 PRINTS Major pollen allergen Lol pI signature 165 180 IPR005795 GO:0005576|GO:0019953
Bhi05g01631 263 PRINTS Major pollen allergen Lol pI signature 216 233 IPR005795 GO:0005576|GO:0019953
Bhi05g01631 263 Pfam Lytic transglycolase 60 134 IPR009009 -
Bhi05g01631 263 Gene3D - 141 245 IPR036749 -
Bhi05g01631 263 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 40 144 IPR007112 -
Bhi05g01631 263 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 158 240 IPR007117 -
Bhi05g01631 263 PANTHER EXPANSIN-B3 5 258 - -
Bhi05g01631 263 Pfam Expansin C-terminal domain 147 229 IPR007117 -
Bhi05g01631 263 PRINTS Expansin/Lol pI family signature 39 57 IPR007118 GO:0005576
Bhi05g01631 263 PRINTS Expansin/Lol pI family signature 61 79 IPR007118 GO:0005576
Bhi05g01631 263 PRINTS Expansin/Lol pI family signature 127 143 IPR007118 GO:0005576
Bhi05g01631 263 PRINTS Expansin/Lol pI family signature 186 200 IPR007118 GO:0005576
Bhi05g01631 263 PRINTS Expansin/Lol pI family signature 226 240 IPR007118 GO:0005576
Bhi05g01631 263 SUPERFAMILY Barwin-like endoglucanases 8 142 IPR036908 -
Bhi05g01631 263 SUPERFAMILY PHL pollen allergen 144 239 IPR036749 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01629 Bhi-Chr5:53379624 Bhi05g01631 Bhi-Chr5:53416600 2.08E-130 dispersed
Bhi05g01631 Bhi-Chr5:53416600 Bhi05g01634 Bhi-Chr5:53512229 9.48E-126 dispersed
Bhi05g01630 Bhi-Chr5:53407298 Bhi05g01631 Bhi-Chr5:53416600 2.82E-130 tandem
Bhi05g01631 Bhi-Chr5:53416600 Bhi05g01632 Bhi-Chr5:53449900 7.83E-116 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01631 - - csv:101206821 517.694