Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01634 ATGGCTTCTTCGTTTCTCGCCTTTGTTAGCTTCTTCGTTCTCGTGATCTCTTTTGCTAATGCTTGTGAACGTTGCATTCATCAATCAAAAGCTGCTTATTATTATAGTGATGCACCTATTCTATATGGGGCTTGTGGCTATGGTTCCTTGGCAAATGAATCTTTCCATGGATACATTGCTGGTGCAGTGCCTTTGCTATACAAACAAGGAGCGGGTTGTGGTGCTTGCTTTCAAGTGAGGTGCAAGAACAAGAAGCTATGCAGCCCAATAGGAGCTAAAATAGTTTTGACAGATCAAAATTATGATAACCGAACTGATTTTGTTCTTAGTAGGAAAGCTTTCTCAGGAATGGCTCGATGGGGCATGGCTCAACATCTTATGAAACTTGGAATGGTTGATATCGAATACAAGAGGGTACCTTGTGGATACAAAAACAAAAACTTGTTGGTGAGAATAGAAGAATGGAGTAACAAGCCATACTACTTGGCCATGAAATTCCTTTACCAAGGTGGCCAGACAGAAATAAAAGCAATTGACATTGCTCAAGTTGGTTCTTCAGATTGGGAACCTTTGAAGAGAAACTATGGAGCTATTTGGGATACAAGTAAAGTACCTGAAGGAGCATTGCAACTAAGAATTGTGGTGGCTTCAGGATATGATAATGAGAATTGGATTTGGACAAATTATGAAATTCCAGCTGATTGGAAAAATGGAGAAACTTATGATACAGGAATTCAAATTGAAGATATCGCCAAAGAATTTTGCTCCCCAAGAGAGTGTGGGGATAGAATATGGAAATAAATATGGTCATATGCATATGGGAAGAAACAACAGAGAAATCCTATAAAATTTATATAGATAATTTTAGTATTTATTCCTTAATGTTTGTATAAGATCAT 899 37.6 MASSFLAFVSFFVLVISFANACERCIHQSKAAYYYSDAPILYGACGYGSLANESFHGYIAGAVPLLYKQGAGCGACFQVRCKNKKLCSPIGAKIVLTDQNYDNRTDFVLSRKAFSGMARWGMAQHLMKLGMVDIEYKRVPCGYKNKNLLVRIEEWSNKPYYLAMKFLYQGGQTEIKAIDIAQVGSSDWEPLKRNYGAIWDTSKVPEGALQLRIVVASGYDNENWIWTNYEIPADWKNGETYDTGIQIEDIAKEFCSPRECGDRIWK 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 53512229 53514774 - XM_039032850.1 Bhi05g01634 35844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01634 266 PANTHER EXPANSIN-B3 8 258 - -
Bhi05g01634 266 SUPERFAMILY PHL pollen allergen 146 242 IPR036749 -
Bhi05g01634 266 Gene3D - 143 247 IPR036749 -
Bhi05g01634 266 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 42 146 IPR007112 -
Bhi05g01634 266 Gene3D - 16 141 IPR036908 -
Bhi05g01634 266 SUPERFAMILY Barwin-like endoglucanases 11 145 IPR036908 -
Bhi05g01634 266 Pfam Expansin C-terminal domain 150 218 IPR007117 -
Bhi05g01634 266 PRINTS Expansin/Lol pI family signature 41 59 IPR007118 GO:0005576
Bhi05g01634 266 PRINTS Expansin/Lol pI family signature 63 81 IPR007118 GO:0005576
Bhi05g01634 266 PRINTS Expansin/Lol pI family signature 129 145 IPR007118 GO:0005576
Bhi05g01634 266 PRINTS Expansin/Lol pI family signature 188 202 IPR007118 GO:0005576
Bhi05g01634 266 PRINTS Expansin/Lol pI family signature 229 243 IPR007118 GO:0005576
Bhi05g01634 266 PANTHER EXPANSIN-LIKE A1-RELATED 8 258 - -
Bhi05g01634 266 Pfam Lytic transglycolase 65 136 IPR009009 -
Bhi05g01634 266 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 160 243 IPR007117 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01630 Bhi-Chr5:53407298 Bhi05g01634 Bhi-Chr5:53512229 4.39E-117 dispersed
Bhi05g01631 Bhi-Chr5:53416600 Bhi05g01634 Bhi-Chr5:53512229 9.48E-126 dispersed
Bhi05g01633 Bhi-Chr5:53460298 Bhi05g01634 Bhi-Chr5:53512229 2.01E-128 tandem
Bhi05g01634 Bhi-Chr5:53512229 Bhi05g01635 Bhi-Chr5:53517761 8.82E-89 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01634 - - cmo:103490398 507.679