Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01657 ATGGAAGTTGAGCACAAAAAGTGTTCATCAAAGAAGGAAGACGATGGGCAAGCCATCATCCAAATGTGGAAATACGTATTTAGTTTCACTGAAATGGCAGCAATAAAATGTGTAATAGACCTCAAAATTGCTGACATTATAGAAAGCTATGGAAGCCCCATGACATTATCAAACTTATCCTCTACTTTAAATTGCTCTTCTTCTCTTCTTTACCGCATCTTGAGATTCCTCATTCATCGTGGAATTTTCAAAGAAGAAACCATTGGTGAAAACCAAACAGTTTATTCACAAACACCTTTGTCTCGTTTGCTAGCCACCAATGTTGAGAACACCATGGCTCCTTTGCTTTTACTGGAAACAAGTCCAGTGATGCTTGCAGCATGGCCTAACTTGAGTGCTCACTTAAAGAACAGTGAGACTTTGCCATTTGAGATTGCTCATGGAATGGATTTTTGGAGCTATGCTGAAGCAAATCCTGAACATAATGTGTTGTTCAATGAGGCCATGGCTTGTTATGCTAAGGTGATTGCTTCTGCTATACTTGAAGGGTGTGGGGATGTTTTTGATGGAGTTGGATGTTTGGTGGATGTTGGAGGAGGAAATGGAAGTACTTTGAGTATTTTGGTGAAGGCTTGTCCATGGATGAAAGGTATTAACTTCGATCTTCCTCATGTTGTGTGTGCTGCCCCACAATATGAGAATGTGCAGCATGTTGCTGGCAATATGTTTGATTTTGTTCCAGAAGCTGATGTTGCTTTCCTCAAGTGGATTCTACATGATTGGAATGACGAAGAATGTATTAAAATTTTGAAGAAGTGTAAGGAAGTCATTCCAAAAAGTGGAGGGAAGGTGATAATTGTAGAAGCAATAGTTGAAGAAAAAGGTGAAAAAAACAAGAAATCAGATGTGGGATTGATGTTTGATGTAGCGATGATGGCTCATACAAATAAAGGGAAGGAAAGAACAATTGAAGAATGGGCATTTGTTATCAATGCAGCTGGCTTCACTCGATACACCATTACACCCATTCAAGCTGTCCAATCACTTATTCAGTGCTTCCCTTGAAGCAAAACAACCAAGTTGTTCTT 1088 39.34 MEVEHKKCSSKKEDDGQAIIQMWKYVFSFTEMAAIKCVIDLKIADIIESYGSPMTLSNLSSTLNCSSSLLYRILRFLIHRGIFKEETIGENQTVYSQTPLSRLLATNVENTMAPLLLLETSPVMLAAWPNLSAHLKNSETLPFEIAHGMDFWSYAEANPEHNVLFNEAMACYAKVIASAILEGCGDVFDGVGCLVDVGGGNGSTLSILVKACPWMKGINFDLPHVVCAAPQYENVQHVAGNMFDFVPEADVAFLKWILHDWNDEECIKILKKCKEVIPKSGGKVIIVEAIVEEKGEKNKKSDVGLMFDVAMMAHTNKGKERTIEEWAFVINAAGFTRYTITPIQAVQSLIQCFP 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 54613638 54615124 + XM_039032881.1 Bhi05g01657 35867

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01657 354 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 350 IPR029063 -
Bhi05g01657 354 Pfam Dimerisation domain 34 77 IPR012967 GO:0046983
Bhi05g01657 354 Gene3D - 4 104 IPR036388 -
Bhi05g01657 354 PANTHER O-METHYLTRANSFERASE 10 348 IPR016461 GO:0008168
Bhi05g01657 354 PANTHER 3'-HYDROXY-N-METHYL-(S)-COCLAURINE 4'-O-METHYLTRANSFERASE 2-LIKE 10 348 - -
Bhi05g01657 354 Pfam O-methyltransferase domain 128 335 IPR001077 GO:0008171
Bhi05g01657 354 PIRSF O-mtase 1 354 IPR016461 GO:0008168
Bhi05g01657 354 Gene3D Vaccinia Virus protein VP39 105 353 IPR029063 -
Bhi05g01657 354 SUPERFAMILY Winged helix DNA-binding domain 15 107 IPR036390 -
Bhi05g01657 354 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 23 354 IPR016461 GO:0008168
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01657 K22588 ASMT; acetylserotonin O-methyltransferase, plant [EC:2.1.1.4] - csv:101222999 578.941
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01654 Bhi-Chr5:54412704 Bhi05g01657 Bhi-Chr5:54613638 0 dispersed
Bhi05g01655 Bhi-Chr5:54412704 Bhi05g01657 Bhi-Chr5:54613638 0 dispersed
Bhi10g01162 Bhi-Chr10:24347402 Bhi05g01657 Bhi-Chr5:54613638 3.43E-103 dispersed
Bhi05g01656 Bhi-Chr5:54551723 Bhi05g01657 Bhi-Chr5:54613638 3.98E-150 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g225 . . . . . . . . Cmo19g00774 . . . . . . . Cpe15g00616 Bhi05g01657 Tan02g0633 . . . . . . . . . . . . . . . . . Csa07g00139 . Cme01g01209 . . Bda15g01018 . . . . Bma08g00738 . . . Cma11g01356 Cma19g00762 . . . . . . . . . . . . . . . . . . Lsi11g01239 . Chy01g00647 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000315 1 12 0 1 0 8 0 7 7 3 4 6 4 5 8 8 6 2 2 8 4 3 2 4 5 10 6 5 7 2 140