Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01663 CGTCAACGGGTACATCCCCAAAACCAGTTTCATCTTCCATCGAATCAACATTGAAGAAGCTTGAATTGAACTGTACAGACAAAAAATGGCAGACGGAGATGGCAGCGTGGAAAGCCTCGATCTCCTGCCTTCTGCTGTCCTTGCTACCATCATGACCAAGCTCGATTTGCCTTCCATCTGCTCCGTTGCCTCCACATGCAGGACTTTCCATTCTTGTGCTTCTCAAATTCTCAATTTTCTTCCCAGTTTTCATCTTCTTGAAATTTCTCCAACGGTGGAATTTCTGAGGCCTCTGCTGCCTCCAAATCCTTTCCTGAGAAGCCTAAAGGTAGATTGTGGTCAGCTTGATGATTCAGCCATCCAGCTTCTGCTGAAGCCTTCCTTGCACGAACTCTGTCTACATAATTGCTCTGATTTCAGTGGGAAATTGCTTTCTGAGATTGGAGGGTGCTGCAAGGATCTAAGGTCCCTCTATTTGAGTTCAGTTGCTGAAAAAAGAGGTCGGGCAATTCATATTGCGGATCTAGAAGAGTTACTAAGTGGTTGCACACAGTTGGAAGCATTAACCTTGATGTTTGATGTCTCATTTTTCCTTCGTCAAAATTTTGCTCGAGTCTGGGCTATGGCTTCAGAAAAACTAACTTCTCTGGAGATTGGCTGTATCTATTCTGTTACAGTCACCGAACTGCTCAGCCAAAATTTGGGAATTGGTAATTCTGTGAATCGGATCGGTCCATCCATGTGGCCTAACATTGAAAAGTTGTGCCTTTCAGTGGACTACATAACTGATGCTATGGTTGGTGCAATATCAAAAGGTCTTGTCTCCTTGACTCATTTGGAACTACAAGATGCTCCCATCATTGAACCAAGATTTTCTTTTGACCTGACCAACGTTGGCCTTCAACAAATCAATCAGCTATCGAAACTGAAGCATCTCTCTTTGGTACGAAGTCAGGAATTTCTTGTAACTTATTTTAGAAGAGTAAACGATCTCGGGATCCTCTTAATGGCTGATGGATGTGCTGACCTGGAAAGCATCTGTCTCGGAGGCTTTTGTCGTGTTACAGACACAGGGTTCAGAACAATTCTGCATACATTCTCTAATTTAAACAAGCTTAGGGTGTTTCATGGAATCCAATTAACTCATCTAGTTTTCCATGATATCTCTGCTACTTCTCTTTCCTTGAAACATGTTAGCTTAAGATGGTGCAGTCTCCTAACAAATGACGCAGTTAAAAATTTATCATTGAACAAGGATCTAAGTTATCTTGACTTGAGAGATTGCAGAAGCCTTCGGGATGAAGCGCTTCAAGCTATCGGAACTATTCCAAAACTGAAGACATTGCTTTTGGACGGGTCTGATATCAGTGATGCAGGATTGTCTCACTTAAGACCCTTGATTATGAGCTCACTAGTCTCCTTGTCTGTTAGAGGTTGCAAGAAGCTTACAGATAAATCCATCACTGTCTTGTTTGATGGCTTATCTAAAATAGAACTACATGTATTAGATCTATCCAACCTTCCTTACCTGTCTGATTCTGCAGTTTTACAACTGACCAGAAGCAAGTTTGCGATATCCGAACTCCGAATGCGTCAATGTCCGCTCATTGGCGATGTCTCGGTCATGGCATTAGCTTCAATGCAGGTCAATGAAGACCAACGACATGGGAGTAGCCTCCGGCTGTTGGATTTGTACAACTGTGGTGGCCTTACACAGCTCTCATTCAAGTGGTTAAAGAATCCATACTTTCCAAGGTTAAGATGGTTGGGTGTAACGGGAAGTCTACATCGCGACTTGGTAGATGCTTTAGCCAGAAGTAGACCATTCTTGCACGTAGCATGTCACGGCGAGGAGTTGGGAGCCGACCATTGGGATAGCTCAGACAGTCTCTATTTGCACCACTATGATGAGGTGGATGAATTTGAACAATGGCTCTTTGATGGTGAGGTTGAGATCGAGGACGATGACGACGATATGGCAGATGCTGAAAATGGTGCAGAGCTAATCCTATGATTCCATGACAGGGTTTGGATTTGTATATGCCAATACCATATGTATCCTCCTGTTTAAGATATTGTATGTAAAGTAATTTCATCTCTTCAAAATGAACTGTTTAAGGTATTGTATTGTATGTAAAGTAATTTTATTCA 2151 42.45 MADGDGSVESLDLLPSAVLATIMTKLDLPSICSVASTCRTFHSCASQILNFLPSFHLLEISPTVEFLRPLLPPNPFLRSLKVDCGQLDDSAIQLLLKPSLHELCLHNCSDFSGKLLSEIGGCCKDLRSLYLSSVAEKRGRAIHIADLEELLSGCTQLEALTLMFDVSFFLRQNFARVWAMASEKLTSLEIGCIYSVTVTELLSQNLGIGNSVNRIGPSMWPNIEKLCLSVDYITDAMVGAISKGLVSLTHLELQDAPIIEPRFSFDLTNVGLQQINQLSKLKHLSLVRSQEFLVTYFRRVNDLGILLMADGCADLESICLGGFCRVTDTGFRTILHTFSNLNKLRVFHGIQLTHLVFHDISATSLSLKHVSLRWCSLLTNDAVKNLSLNKDLSYLDLRDCRSLRDEALQAIGTIPKLKTLLLDGSDISDAGLSHLRPLIMSSLVSLSVRGCKKLTDKSITVLFDGLSKIELHVLDLSNLPYLSDSAVLQLTRSKFAISELRMRQCPLIGDVSVMALASMQVNEDQRHGSSLRLLDLYNCGGLTQLSFKWLKNPYFPRLRWLGVTGSLHRDLVDALARSRPFLHVACHGEELGADHWDSSDSLYLHHYDEVDEFEQWLFDGEVEIEDDDDDMADAENGAELIL 642
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 54678782 54682469 + XM_039032188.1 Bhi05g01663 35873

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01663 642 Gene3D Ribonuclease Inhibitor 349 423 IPR032675 -
Bhi05g01663 642 SUPERFAMILY RNI-like 301 565 - -
Bhi05g01663 642 SUPERFAMILY RNI-like 48 346 - -
Bhi05g01663 642 SMART LRR_CC_2 440 465 IPR006553 -
Bhi05g01663 642 SMART LRR_CC_2 364 389 IPR006553 -
Bhi05g01663 642 SMART LRR_CC_2 97 122 IPR006553 -
Bhi05g01663 642 SMART LRR_CC_2 312 337 IPR006553 -
Bhi05g01663 642 SMART LRR_CC_2 468 493 IPR006553 -
Bhi05g01663 642 SMART LRR_CC_2 494 519 IPR006553 -
Bhi05g01663 642 SMART LRR_CC_2 390 414 IPR006553 -
Bhi05g01663 642 Pfam Leucine Rich repeat 389 411 IPR001611 GO:0005515
Bhi05g01663 642 Gene3D Ribonuclease Inhibitor 424 591 IPR032675 -
Bhi05g01663 642 PANTHER RNI-LIKE SUPERFAMILY PROTEIN-RELATED 14 563 - -
Bhi05g01663 642 PANTHER UNCHARACTERIZED 14 563 - -
Bhi05g01663 642 Pfam F-box domain 12 47 IPR001810 GO:0005515
Bhi05g01663 642 Gene3D Ribonuclease Inhibitor 16 162 IPR032675 -
Bhi05g01663 642 Gene3D Ribonuclease Inhibitor 179 348 IPR032675 -
Bhi05g01663 642 SUPERFAMILY F-box domain 8 47 IPR036047 GO:0005515
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01663 - - - csv:101213291 1200.27
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01663 Bhi-Chr5:54678782 Bhi09g01852 Bhi-Chr9:50896839 4.76E-72 dispersed
Bhi05g01663 Bhi-Chr5:54678782 Bhi05g01664 Bhi-Chr5:54679390 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g223 . . . . . . . . . Cmo11g01759 . . . . Sed04g3823 Cpe04g00612 . Bhi05g01663 Tan02g0637 Cmetu01g0006 . . . . . . . . . . . . . . . . . . . Blo04g00588 . . Bda14g00633 . . Bma03g00621 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006869 2 2 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 3 2 37