Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01664 ATTGTGGTCAGCTTGATGATTCAGCCATCCAGCTTCTGCTGAAGCCTTCCTTGCACGAACTCTGTCTACATAATTGCTCTGATTTCAGTGGGAAATTGCTTTCTGAGATTGGAGGGTGCTGCAAGGATCTAAGGCATTAACCTTGATGTTTGATGTCTCATTTTTCCTTCGTCAAAATTTTGCTCGAGTCTGGGCTATGGCTTCAGAAAAACTAACTTCTCTGGAGATTGGCTGTATCTATTCTGTTACAGTCACCGAACTGCTCAGCCAAAATTTGGGAATTGGTAATTCTGTGAATCGGATCGGTCCATCCATGTGGCCTAACATTGAAAAGTTGTGCCTTTCAGTGGACTACATAACTGATGCTATGGTTGGTGCAATATCAAAAGGTCTTGTCTCCTTGACTCATTTGGAACTACAAGATGCTCCCATCATTGAACCAAGATTTTCTTTTGACCTGACCAACGTTGGCCTTCAACAAATCAATCAGCTATCGAAACTGAAGCATCTCTCTTTGGTACGAAGTCAGGAATTTCTTGTAACTTATTTTAGAAGAGTAAACGATCTCGGGATCCTCTTAATGGCTGATGGATGTGCTGACCTGGAAAGCATCTGTCTCGGAGGCTTTTGTCGTGTTACAGACACAGGGTTCAGAACAATTCTGCATACATTCTCTAATTTAAACAAGCTTAGGGTGTTTCATGGAATCCAATTAACTCATCTAGTTTTCCATGATATCTCTGCTACTTCTCTTTCCTTGAAACATGTTAGCTTAAGATGGTGCAGTCTCCTAACAAATGACGCAGTTAAAAATTTATCATTGAACAAGGATCTAAGTTATCTTGACTTGAGAGATTGCAGAAGCCTTCGGGATGAAGCGCTTCAAGCTATCGGAACTATTCCAAAACTGAAGACATTGCTTTTGGACGGGTCTGATATCAGTGATGCAGGATTGTCTCACTTAAGACCCTTGATTATGAGCTCACTAGTCTCCTTGTCTGTTAGAGGTTGCAAGAAGCTTACAGATAAATCCATCACTGTCTTGTTTGATGGCTTATCTAAAATAGAACTACATGTATTAGATCTATCCAACCTTCCTTACCTGTCTGATTCTGCAGTTTTACAACTGACCAGAAGCAAGTTTGCGATATCCGAACTCCGAATGCGTCAATGTCCGCTCATTGGCGATGTCTCGGTCATGGCATTAGCTTCAATGCAGGTCAATGAAGACCAACGACATGGGAGTAGCCTCCGGCTGTTGGATTTGTACAACTGTGGTGGCCTTACACAGCTCTCATTCAAGTGGTTAAAGAATCCATACTTTCCAAGGTTAAGATGGTTGGGTGTAACGGGAAGTCTACATCGCGACTTGGTAGATGCTTTAGCCAGAAGTAGACCATTCTTGCACGTAGCATGTCACGGCGAGGAGTTGGGAGCCGACCATTGGGATAGCTCAGACAGTCTCTATTTGCACCACTATGATGAGGTGGATGAATTTGAACAATGGCTCTTTGATGGTGAGGTTGAGATCGAGGACGATGACGACGATATGGCAGATGCTGAAAATGGTGCAGAGCTAATCCTATGATTCCATGACAGGGTTTGGATTTGTATATGCCAATACCATATGTATCCTCCTGTTTAAGATATTGTATGTAAAGTAATTTCATCTCTTCAAAATGAACTGTTTAAGGTATTGTATTGTATGTAAAGTAATTTTATTCA 1725 41.68 MFDVSFFLRQNFARVWAMASEKLTSLEIGCIYSVTVTELLSQNLGIGNSVNRIGPSMWPNIEKLCLSVDYITDAMVGAISKGLVSLTHLELQDAPIIEPRFSFDLTNVGLQQINQLSKLKHLSLVRSQEFLVTYFRRVNDLGILLMADGCADLESICLGGFCRVTDTGFRTILHTFSNLNKLRVFHGIQLTHLVFHDISATSLSLKHVSLRWCSLLTNDAVKNLSLNKDLSYLDLRDCRSLRDEALQAIGTIPKLKTLLLDGSDISDAGLSHLRPLIMSSLVSLSVRGCKKLTDKSITVLFDGLSKIELHVLDLSNLPYLSDSAVLQLTRSKFAISELRMRQCPLIGDVSVMALASMQVNEDQRHGSSLRLLDLYNCGGLTQLSFKWLKNPYFPRLRWLGVTGSLHRDLVDALARSRPFLHVACHGEELGADHWDSSDSLYLHHYDEVDEFEQWLFDGEVEIEDDDDDMADAENGAELIL 480
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 54679390 54682469 + XM_039032189.1 Bhi05g01664 35874

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01664 480 Gene3D Ribonuclease Inhibitor 190 261 IPR032675 -
Bhi05g01664 480 SUPERFAMILY RNI-like 56 405 - -
Bhi05g01664 480 Pfam Leucine Rich repeat 227 249 IPR001611 GO:0005515
Bhi05g01664 480 Gene3D Ribonuclease Inhibitor 20 189 IPR032675 -
Bhi05g01664 480 PANTHER F-BOX PROTEIN AT-B 54 374 - -
Bhi05g01664 480 PANTHER UNCHARACTERIZED 54 374 - -
Bhi05g01664 480 SMART LRR_CC_2 278 303 IPR006553 -
Bhi05g01664 480 SMART LRR_CC_2 202 227 IPR006553 -
Bhi05g01664 480 SMART LRR_CC_2 332 357 IPR006553 -
Bhi05g01664 480 SMART LRR_CC_2 306 331 IPR006553 -
Bhi05g01664 480 SMART LRR_CC_2 150 175 IPR006553 -
Bhi05g01664 480 SMART LRR_CC_2 228 252 IPR006553 -
Bhi05g01664 480 Gene3D Ribonuclease Inhibitor 262 432 IPR032675 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01664 - - - cmo:103490256 903.279
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01664 Bhi-Chr5:54679390 Bhi09g01853 Bhi-Chr9:50896839 4.76E-56 dispersed
Bhi05g01663 Bhi-Chr5:54678782 Bhi05g01664 Bhi-Chr5:54679390 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g222 . . . . . . . . . . . . . . . . . Bhi05g01664 Tan02g0638 . . Hepe02g0397 . . Cla02g00399 Cam02g0404 Cec02g0404 Cco02g0419 Clacu02g0407 Cmu02g0403 Cre02g0737 Cone12ag1252 Cone8ag1307 . . . Csa07g00134 . Cme01g01214 . . Bda15g01019 . Bpe15g00796 . . Bma08g00739 . . . Cma11g01358 . Car11g01391 . . . . . . . . . . . . . . . . . Lsi11g01228 . Chy01g00652 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006869 2 2 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 3 2 37