Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01668 GCCCAACAACTATTCTCTCTCCCACCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCGAACCCATTCTTTCTCTTCGTCGATCGCCATTTTTTCTCTGGAAGCACTAACCAGTAATGGATACGCTTAAGAAATCCTTCAAAGGCAATGTATCTTTCAAGCATACAAGGAAGATTTCTGCTGGCGGAGCCGGCAGCGAAATCAATCACGAGGAGCTCCCCATTCTTCTCAATCACGAACCTGCGGATCATCGTCGTCGTCTTAGGGATCGTCACCCGGTGAATGATTCTGATTCATCTGACGGAACAGAGGTCATTCTCAAGATCGATGATGGCGGTTCTTCCACTGTCTCCAGATCTCTGGACTCTGTCGGCAGTAATGGCGGGAAGGTTTGGCGGGAATCCAGGTACGGTTTTTGGAATAATAATGCAATTGGAATTGGGGAAAGCGCGAGTAGGGTTAGTGGTGCGAGAATGAGTGATAGTGGTGTGGATAGAAATGAGGGATTTGAATTTGTACAGCCTGGTTATGGAATGGAGGATCCTCCGACGAAGCTGATTGGTGAGTTTCTTCATAAGCAGAAAATTAGGGGGGAAACGACTTTGGATATGGATTTGGAAATGGAGGAGTTGAAGCCTGATAGGAGTATGACTCCATTGCCGGAATCGCCGTTGAATCAAACATCTAAGGATCTTAAAGTTTCGTTTCAGCAGGATTCGACAGAAATTTCGAGCAATGATCAGTCGGTAAGAAGGCGGTGTAGAGATTCGCGCGATTTGCCAGAAGAGTTTAAAGGAGGACAACCGCCATGGCAGCAATCGCACCATGAACGTCTTGGGTCTCCGACTATTTCTGGGGTTCAGAATGAGTCTTCTGCTGAGGCTATGAGGTCCGCATCTAACTTGTCTTTTCATAGTGAGCTTTCGTTTCAAAGGAAATCTAATTTGCTTAGGGCGAAAACCAAGTCAAGATTGATAGACTCGCCTGCAGAACCAGACCGGCTCTCTGGCCTCATTCCTAAATCAGGACAGCTACGATCTGGGTTTCTCGGCAAGATTGACGACGACGACGACGATCCCTTTCTGGAGGAGGACCTTCCAGACGATTTTAAAAGGGGAAATTTCAATGCTCTAACTGTGCTGCAATGGATCAGTTTGATTCTAATCACTGCGGCTTTAGTTTGCACTCTTTCTATTCCTTATTTGAGGGAAAAGAGCCTATGGGAGTTAGATATATGGAAATGGGAGGTGATGATTTTGATACTGATTTGTGGACGATTGGTATCTGGTTGGGGGATTAAGATCGTAGTATTTTTCATTGAGAGGAATTTTCTTTTGCGTAAAAAGGTTCTGTATTTTGTATATGGGGTTAGAAAGCCAGTGCAGAATTGTCTATGGTTAGGCCTTGTTCTGATCGCTTGGCATTTGTTGTTCAATAAGCGGGTTGAGAAACAAACCAACGCTAGTATACTCAATTATGTAAGGAGGGTTTTAGTGTGTCTATTGATAAGCACATTCCTATGGCTTGTGAAAACCTTGATGGTGAAGGTGCTTGCATCTTCTTTCCATGTAAGCACATACTTCGATCGAATTCAGGAATCGTTGTTTAACCAATATGTCATTGAGACTCTCTCAGGGCCACCTCTGATTGAAATACTAAAGAATGAGGAAGAAGAGGAGAGGGTTGCTGATGAAGTCCAAAAATTACAGAATGCAGGAATTAACATACCCTCTGATCTCAAGGCAGCAACCTTCTCTTCTGTAAAGAGTGGAAGGGTAATAGGTAGTGGACGCACCCACAAAAGTTTTTGTGCAAAAAGTTCCAAACTCTCTCGAGCACTTACCAAAAATGGGAACGATGGAATAACAATCGACCACTTGCACAAACTAAGTCCCAAGAATGTATCTGCTTGGAATATGAAGAGGTTGTTGAACATAGTTCGATATGGTAGTATTTCCACACTGGATGAGCAGATACAGGGGCCAGGTCGTGATGATGAATCTACTACAGAGATCAAAAGTGAACGCGAGGCAAAGGCTGCAGCCAAGAAGATTTTTCAGAATGTGGCTCGGCGTGGATATAAGTACATATACTTGGATGACTTAATGCGGTTCATGAGAGAAGACGAGGTTTTTAAAACGATGAGTCTCTTTGAAGGAGCAGCTGAAAACCGGAGGATAAGCAAATCTGCCTTGAAAAATTGGGTGGTCAATGCCTTCAGAGAACGAAGAGCCCTTGCTTTAACACTGAATGATACCAAAACAGCTGTGGATAAACTGCACCATATGGTGAATGTCATATTCAGCATCCTCATATTAATTTTATGGCTTATAGTATTAGGAATTGCCTCCAGCAAATTTTTCGTCTTCCTTAGTTCTCAAATAGTGGTCGTGGCATTTATTTTTGGAAACACTTGCAAAACTATATTTGAAGCAATCATCTTTTTATTTGTCATGCATCCATTTGACGTTGGAGATCGATGCGAAATCGATGGAACGCAGATGGTTGTAGAGGAAATGAACATCTTGACTACTGTATTCTTGAGATACGACAACTTGAAGATTATAATCCCAAATAGTGTTCTTGCAACCAAATTAATCCACAACTTCTACCGTAGTCCGGAGATGGGTGAATCAGTTGAGTTCTATGTCCATATCGCTACACCGGCTGAGAAAATTACGGCCATGAAACAGAGAATCATAAGTTACATTGAAGGCAACAAAGAACATTGGTGTCCTTCCCCTATGGTTGTGTTCATGGATATAGATGATTTAAATAAGCTCAAATTGGCAGTTTGGTTGTCACACAGAATGAACCATCAAGACGCAGGTGAAAGATGGGCTCGAAGGTCCGTCTTGGTCGAAGAAGTCGTGAAAGTCTGTCAAGAGCTCGACATTCAATATCGTCTATTGCCCATCGATATCAATATCCGTTCACTACCTTCTTCTGCACCCTCCATTGGCTTTCCATCTAATTGGACTTCCTCTGCAAGTTGAACAGCAAGCAACACACAAGGCTTCACTTTCATCTTCTCTCTCAGTTAAGGCTTTTCCTGTTATATCATCTCCATTATAGAGATTCACCGATCATCATTCCAACGGGACGACAAAGAACTAAATACTCTATGAATCACCGAATAGATAGGTAGACATGTTTCGTTACATTGATCAAGAATGTTCACAGCGACCGAGAAAGGCGAAGGTTGAGAAATGAGGAAGTGATTTACATATTAGCAAGAGTTTGAGTTTGAGATACATCACAATAAGTGAGGTCTTGGGTATTTTGTTTATACATGAAGATGTTCTGAGTTTAATTAGTATAGACACTTTCCCTTTTGTACTTTGTTTGGTCTGATGTGGTTAGGATAGGAACTTGGGTATTAGATCAGTTCCTCCATCCATGTCAATTTGTAGATTGCTTGCAACAAAGCACTCATGAACTGTATGTGTGTCCTTTGCATATATGTAAATGTATTGAAAGGATAATAGAATACAATTACTATAGAAATATCTTGTAATAGTGAATCAATTGCATCATGGAAGTTCAA 3546 41.77 MDTLKKSFKGNVSFKHTRKISAGGAGSEINHEELPILLNHEPADHRRRLRDRHPVNDSDSSDGTEVILKIDDGGSSTVSRSLDSVGSNGGKVWRESRYGFWNNNAIGIGESASRVSGARMSDSGVDRNEGFEFVQPGYGMEDPPTKLIGEFLHKQKIRGETTLDMDLEMEELKPDRSMTPLPESPLNQTSKDLKVSFQQDSTEISSNDQSVRRRCRDSRDLPEEFKGGQPPWQQSHHERLGSPTISGVQNESSAEAMRSASNLSFHSELSFQRKSNLLRAKTKSRLIDSPAEPDRLSGLIPKSGQLRSGFLGKIDDDDDDPFLEEDLPDDFKRGNFNALTVLQWISLILITAALVCTLSIPYLREKSLWELDIWKWEVMILILICGRLVSGWGIKIVVFFIERNFLLRKKVLYFVYGVRKPVQNCLWLGLVLIAWHLLFNKRVEKQTNASILNYVRRVLVCLLISTFLWLVKTLMVKVLASSFHVSTYFDRIQESLFNQYVIETLSGPPLIEILKNEEEEERVADEVQKLQNAGINIPSDLKAATFSSVKSGRVIGSGRTHKSFCAKSSKLSRALTKNGNDGITIDHLHKLSPKNVSAWNMKRLLNIVRYGSISTLDEQIQGPGRDDESTTEIKSEREAKAAAKKIFQNVARRGYKYIYLDDLMRFMREDEVFKTMSLFEGAAENRRISKSALKNWVVNAFRERRALALTLNDTKTAVDKLHHMVNVIFSILILILWLIVLGIASSKFFVFLSSQIVVVAFIFGNTCKTIFEAIIFLFVMHPFDVGDRCEIDGTQMVVEEMNILTTVFLRYDNLKIIIPNSVLATKLIHNFYRSPEMGESVEFYVHIATPAEKITAMKQRIISYIEGNKEHWCPSPMVVFMDIDDLNKLKLAVWLSHRMNHQDAGERWARRSVLVEEVVKVCQELDIQYRLLPIDINIRSLPSSAPSIGFPSNWTSSAS 959
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 54737602 54742716 + XM_039031650.1 Bhi05g01668 35878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01668 959 PIRSF Memb_At2g17000 52 959 IPR016688 -
Bhi05g01668 959 SUPERFAMILY Sm-like ribonucleoproteins 772 831 IPR010920 -
Bhi05g01668 959 Coils Coil 513 536 - -
Bhi05g01668 959 MobiDBLite consensus disorder prediction 45 65 - -
Bhi05g01668 959 Pfam Mechanosensitive ion channel 724 928 IPR006685 GO:0016020|GO:0055085
Bhi05g01668 959 MobiDBLite consensus disorder prediction 45 59 - -
Bhi05g01668 959 MobiDBLite consensus disorder prediction 207 224 - -
Bhi05g01668 959 MobiDBLite consensus disorder prediction 196 259 - -
Bhi05g01668 959 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 110 943 - -
Bhi05g01668 959 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 3 120 - -
Bhi05g01668 959 MobiDBLite consensus disorder prediction 235 259 - -
Bhi05g01668 959 Gene3D - 782 831 IPR023408 -
Bhi05g01668 959 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 3 120 IPR016688 -
Bhi05g01668 959 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 110 943 IPR016688 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01668 Bhi-Chr5:54737602 Bhi10g01195 Bhi-Chr10:26206649 0 dispersed
Bhi05g01668 Bhi-Chr5:54737602 Bhi05g01669 Bhi-Chr5:54737602 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01668 K22048 - csv:101207426 1656.34