Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01788 AAACTTTTCTCGTGTTATTTTGAGAACATTTTAATCGGATTTGTGGGTTATAAATATGGAAGGAGAGGATTCAAGTTTCTGAGGGGAGGGTTGTATTTCGATATTTTCAGATTTAGATTTGGGAATCGCCATTAGAATAGTGGTGAAGATGAATGTTGTGGGGTTTTCTTATTCTTCATTTGTTGTGGTTCTTGCTGTTTTGGTTATGGTTTTGAATGGAGTGGAGGTTTGTTATGGAGGTATAACAAGCCAGTTTCTGAGGAAGGTTGAGAAAACTGTGGATATGCCCCTTGATAGTGATGTTTTTGCTGTTCCTCCTGGTTTTAATGCTCCCCAGCAGGTTCATATCACACAAGGAGATCATGAAGGGAAGGCAGTGATTGTTTCATGGGTCACTCCAGATAAACCAGGATCAAATAAAGTATCGTATTGGAGTGAGAAAAGCAAGCAAAAGAAACAGGCCTTTGGAAAAGTATATACTTACAAGTTCTATAATTACACTTCTGGCTACATTCATCATTGCACCATTGAAAACTTGAAGTACAACACCAAATACTACTATGAAGTGGGAATCGGTTACTCTCCAAGAACATTCTGGTTCGTCACTCCTCCAGAAGTCGGTCCCGATGTCCCTTATACATTTGGTCTCATAGGGGATCTTGGCCAGAGTTTTGATTCAAATATAACGCTGACACATTACGAAAGAAACCCACATAAAGGAAAAACAGTGTTATTTGTAGGGGATCTATCTTATGCTGACAACTATCCGTTCCATGACAATGTAAGGTGGGATACATGGGGAAGATTTACTGAGAGAAGCATCGCCTATCAGCCTTGGATATGGACTGCAGGAAATCATGAAATTGATTTTGTCCCAGAAATTGGCGAGACCGAACCTTTCAAGCCGTTTACTAACCGATATCATGTCCCTTATAAAGCATCTGAGAGCACAGCTCCTTTTTGGTACTCAATCAAGAGAGGTCCAGCATACATCATAGTGTTGGCTTCATATTCAGCTTATGGTAAATACACTCCTCAATACCAATGGCTCGAAGCGGAGCTACCAAAAGTTAACAGAAGTGAAACACCATGGTTGATTGTTCTTGTGCATTCCCCATGGTACAACAGCTACAACTATCATTACATGGAAGGAGAAACTATGCGAGTGATGTATGAGTCATGGTTTGTACAATACAAAGTTGACGTCGTCTTTGCTGGCCATGTCCATGCTTACGAAAGATCTGAAAGAATTTCAAATATTGCATACAACATTGTGAATGGCCACTGTATTCCAGTGAAAGATCAATCTGCACCTGTATACATAACAATAGGTGATGGAGGAAACCTTGAAGGCCTAGCTACCAATATGACGGAGCCACAGCCTGCGTATTCAGCGTATCGTGAAGCAAGCTTTGGCCATGGCATATTCGATATAAAGAACAGAACTCATGCATATTTCGGTTGGAACAGGAATCAAGATGGATATGCAGTTGAAGCTGATACTCTTTGGTTCTTCAACAGACACTGGTACCCGGTTGATGAGTCGTTAAGTGAGCAGAAATGAAAACTCTGCAGATTTGAATTAGAATACACAATTTTAAAAATCTTTACCATCAAATAATACTCATGATCGGATGAGTTCAATATGAAAAAAGTTTGATTTCACATTCACTAGTAGGTTAATGGAAAGGGTCATCCTTTTTTGCCTCCATTTATTTCACAAGTTGAAAGGAAACCAAACTTGTATTAAATTTTGTGAATACTATAGCAGTGCTTGAATTTAACTGCTATCAGAAAAATTAATATGAAGGTAGCTTATTCCTTTTTATGAGAGATGAGACAGTTGCTTGAATTA 1855 38.98 MNVVGFSYSSFVVVLAVLVMVLNGVEVCYGGITSQFLRKVEKTVDMPLDSDVFAVPPGFNAPQQVHITQGDHEGKAVIVSWVTPDKPGSNKVSYWSEKSKQKKQAFGKVYTYKFYNYTSGYIHHCTIENLKYNTKYYYEVGIGYSPRTFWFVTPPEVGPDVPYTFGLIGDLGQSFDSNITLTHYERNPHKGKTVLFVGDLSYADNYPFHDNVRWDTWGRFTERSIAYQPWIWTAGNHEIDFVPEIGETEPFKPFTNRYHVPYKASESTAPFWYSIKRGPAYIIVLASYSAYGKYTPQYQWLEAELPKVNRSETPWLIVLVHSPWYNSYNYHYMEGETMRVMYESWFVQYKVDVVFAGHVHAYERSERISNIAYNIVNGHCIPVKDQSAPVYITIGDGGNLEGLATNMTEPQPAYSAYREASFGHGIFDIKNRTHAYFGWNRNQDGYAVEADTLWFFNRHWYPVDESLSEQK 471
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 56795409 56799533 - XM_039031404.1 Bhi05g01788 35998

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01788 471 CDD FN3 60 146 IPR003961 GO:0005515
Bhi05g01788 471 Pfam Purple acid Phosphatase, N-terminal domain 62 144 IPR015914 GO:0003993|GO:0046872
Bhi05g01788 471 PANTHER PURPLE ACID PHOSPHATASE 9 469 - -
Bhi05g01788 471 Gene3D - 158 467 IPR029052 -
Bhi05g01788 471 SUPERFAMILY Purple acid phosphatase, N-terminal domain 43 155 IPR008963 GO:0003993|GO:0046872
Bhi05g01788 471 PANTHER ACID PHOSPHATASE RELATED 9 469 IPR039331 GO:0003993
Bhi05g01788 471 Pfam Calcineurin-like phosphoesterase 164 362 IPR004843 GO:0016787
Bhi05g01788 471 Pfam Iron/zinc purple acid phosphatase-like protein C 388 447 IPR025733 -
Bhi05g01788 471 SUPERFAMILY Metallo-dependent phosphatases 159 465 IPR029052 -
Bhi05g01788 471 Gene3D - 61 157 - -
Bhi05g01788 471 CDD MPP_PAPs 159 457 IPR041792 -
Bhi05g01788 471 ProSiteProfiles Fibronectin type-III domain profile. 61 156 IPR003961 GO:0005515
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01788 K22390 ACP7; acid phosphatase type 7 - csv:101211612 935.25
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bhi05g01788 Bhi10g01967 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00932 Bhi-Chr2:20649768 Bhi05g01788 Bhi-Chr5:56795409 0 dispersed
Bhi02g00933 Bhi-Chr2:20649769 Bhi05g01788 Bhi-Chr5:56795409 0 dispersed
Bhi03g00901 Bhi-Chr3:16984667 Bhi05g01788 Bhi-Chr5:56795409 0 dispersed
Bhi05g01788 Bhi-Chr5:56795409 Bhi03g01832 Bhi-Chr3:38545530 1.42E-83 dispersed
Bhi05g01788 Bhi-Chr5:56795409 Bhi04g00213 Bhi-Chr4:5157597 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g3 . Blo15g00679 Bda06g00991 . . . . Bma12g00550 . . Cma02g00375 Cma20g00824 Car02g00242 Car20g00710 Sed03g1723 . . Bhi05g01788 Tan02g2021 Cmetu03g0999 . . . . . . . . . . . Cone12ag1169 Cone8ag1217 . . Lsi10g00400 . Chy11g00351 . . Blo13g00542 . . . . . . Sed01g0278 Cmo02g00382 Cmo20g00835 . . . . Cpe16g00264 Cpe05g01280 Bhi10g01967 Tan05g1260 Cmetu11g0821 . . . . . . . . . . . . Csa02g01291 . Cme11g00153
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000712 2 3 4 4 1 3 4 3 3 3 3 3 3 3 3 3 3 5 4 3 4 3 3 3 3 3 3 4 3 5 97