Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01792 CTCAGCTCTGCCTTCGAAAAGAAATCTTGTGTAAATCTCCGTCATCGTCTTCATCCCGCCGAATTTCTCTGCTTCATTTTTCACCAGCAATGGCGTCAGATTCTTCTCCAGTTAACTTCAATACAGGTCCTTCGTCGCCGGATGATTCATTCTCTAGTCCCATCGGAAACACCGTCTCCTCCTCAGGAGACGGGTATCGCCGTCGAAGCCGTCGCCGGTCATCTACTCCTTCGGAAATGGCTACGCCGCCGCGTCAACGACCCCGAATGTTCTCGTCTGAAACCACACCGACGGCTAAGGAACCGCGCTCGCGCCGTCGAGGCGGTGGGCGAAGAGCGTCGGGCAGTGAAGCCCCTCCGATAGCTGCCACACCTTCTTCGACGGATGATATTCCGCCATCGACTGAACCTGGTGACGGCGATGACATGGATGAGGACCATCCGACCTTTGTATGGGGGACGAATATCAGTGTTGACGATGTAAAGGGAGCTATTATTCGGTTTTTGAGGCATTTCCGTGATCGTCAGGCGTCGCAGTCTGAAGGGGATTTTCATACTGAGGGGAAATACGCGGAGGTAATCAAGAGGGTTCTTGAAATTGAAGGGGATTCGCTCGATGTGGATGCGCAGGATTTGTTCAATTACGATACCGATTTATACACAAAGATGGTGAGGTACCCTCTCGAGGTTCTTGCTATTTTTGATATCGTTCTGATGGAAATGGTGCCCCAAATCAACCCATTGTTCGAGAAGCACATTCAAACTCGGATATTCAATCTCAAAACTTCTACTTCAATGAGAAACCTTAACCCATCTGACATTGAGAGGATGGTATCACTGAAGGGAATGATTATAAGGTGTAGTTCGATCATTCCTGAGATCAGGGAGGCGATATTTAGATGTCTCGTATGTGGGTACTATACTGACCCTGTAGCTATTGAAAGAGGACGAATAACTGAGCCCACTATATGCTTGAAGGAAGAGTGCCAAGCAAGGAACTCCATGACATTGGTTCACAATCGATGCAGGTTTGCCGATAAGCAGATTGTGCGGCTTCAGGAGACTCCTGATGAGATACCTGAAGGAGGAACGCCTCATACTGTAAGCTTGTTAATGCACGACAAGCTGGTTGATACTGGAAAGCCTGGTGACAGAGTTGAGGTCACTGGGATTTACAGGGCCATGAGTGTGAGAGTTGGACCAACCCAGAGAACTGTAAAATCATTGTTCAAGACTTATATAGACTGTCTTCATATAAAGAAGACTGATAAGTCAAGAATGGTGGCAGAAGACCTGACTGAAGCTGAGAACCGGTTGGGTGGAAACGTGGATGATGTCTCATTTGATGAAGCGAAGGTGGAAGAGTTGAAAGAACTCTCCAAAAAGCCTGATATATATGACAGACTGACCAGGTCATTGGCTCCTAATATTTGGGAGCTTGATGATGTAAAGAAGGGCCTTCTTTGCCAGCTTTTTGGTGGGAATGCTTTGAAATTGGCATCTGGTGCAAGCTTCCGTGGAGATATTAACATACTTCTCGTTGGTGATCCTGGAACCAGCAAGTCTCAGCTTCTTCAATACATACACAAACTATCCCCCCGTGGCATTTACACCAGTGGGAGGGGTAGCTCTGCTGTTGGTTTGACTGCTTATGTCACCAAAGATCCCGAAACAGGGGAAACAGTACTGGAGAGTGGAGCCTTGGTTTTGAGTGACCGGGGCATATGCTGCATTGATGAATTTGATAAAATGTCTGAAAATGCAAGGAGCATGTTGCACGAGGTGATGGAGCAACAAACTGTTTCAATAGCAAAGGCTGGAATTATTGCTTCCCTTAATGCCAGGACTTCAGTATTGGCTTGTGCAAATCCTAGTGGTTCACGTTATAACCCTCGCCTATCTGTGATTGATAACATACACCTTCCTCCTACTTTGTTATCAAGGTTTGACTTGATTTATCTAATTTTAGATAAAGCTGATGAGCAAACAGATAGGCGCCTTGCTAAGCATATTGTCTCACTACACTTTGACAACCCAGAGGGCATCGAGCAGGATTTCTTGGACCTTCATACCTTGACTTCATATGTCAGCTATGCTAGGAAAAATATTCACCCAAAATTGTCAGATGAGGCAGCTGAAGAGTTGACTAGAGGCTATGTTGAGCTGAGGAGGAGAGGAAACTTTCCAGGCAGTAGTAAAAAGGTCATTACAGCTACCCCCAGACAAATTGAGAGTTTAATACGTCTAAGCGAAGCTCTTGCTCGAATACGTTTCTCAGAATGGGTTGAAAAGGGGGATGTTCTTGAGTCATTCCGGCTTCTAGAAGTTGCAATGCAACAATCTGCAACAGATCATTCTACAGGAACTATTGACATGGATCTGATTACCACGGGAGTATCGGCAAGCGAAAGGATGCGAAGGGAGAGTTTATTATCGGCAACTCGCAACCTTATTATGGAGAAAATGCAGCTTGGAGGACCCTCCATGCGCTTGGCCGAGTTGTTGGATGAGTTGAAGAAGAAGAATCCTGATAATGAAGTCCATCTCAACAACCTTAGAAACGCAGTATCGACACTTGCAAGTGAGGGATTTGTAGCAATCCATGGTGATAGCATAAAGAGAATATGAGGAGTTTGAAGACGATGATGGCAGGGAACTTCTTTTGCAATTTCCAAGCCATATTGATTAGTTCAGATCAAATGAAGCCACGGGAAAAACATCCATGCTTGGCATCTAGGTATCACTAGAATGAGTTATTCTTGTTGCATAGAATCTCATGTGCTTTTTCTTCCCTCCCTCTCTAACCTTATGTAACAATATGTTATTTGCTGGTTTAATCATGGCTAATATAGTTTTGACTGCAGGTATTTATATAGTGATAGTTTTCCTCATATATTTTTCT 2901 45.02 MASDSSPVNFNTGPSSPDDSFSSPIGNTVSSSGDGYRRRSRRRSSTPSEMATPPRQRPRMFSSETTPTAKEPRSRRRGGGRRASGSEAPPIAATPSSTDDIPPSTEPGDGDDMDEDHPTFVWGTNISVDDVKGAIIRFLRHFRDRQASQSEGDFHTEGKYAEVIKRVLEIEGDSLDVDAQDLFNYDTDLYTKMVRYPLEVLAIFDIVLMEMVPQINPLFEKHIQTRIFNLKTSTSMRNLNPSDIERMVSLKGMIIRCSSIIPEIREAIFRCLVCGYYTDPVAIERGRITEPTICLKEECQARNSMTLVHNRCRFADKQIVRLQETPDEIPEGGTPHTVSLLMHDKLVDTGKPGDRVEVTGIYRAMSVRVGPTQRTVKSLFKTYIDCLHIKKTDKSRMVAEDLTEAENRLGGNVDDVSFDEAKVEELKELSKKPDIYDRLTRSLAPNIWELDDVKKGLLCQLFGGNALKLASGASFRGDINILLVGDPGTSKSQLLQYIHKLSPRGIYTSGRGSSAVGLTAYVTKDPETGETVLESGALVLSDRGICCIDEFDKMSENARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIDNIHLPPTLLSRFDLIYLILDKADEQTDRRLAKHIVSLHFDNPEGIEQDFLDLHTLTSYVSYARKNIHPKLSDEAAEELTRGYVELRRRGNFPGSSKKVITATPRQIESLIRLSEALARIRFSEWVEKGDVLESFRLLEVAMQQSATDHSTGTIDMDLITTGVSASERMRRESLLSATRNLIMEKMQLGGPSMRLAELLDELKKKNPDNEVHLNNLRNAVSTLASEGFVAIHGDSIKRI 845
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 56919772 56925440 - XM_039031413.1 Bhi05g01792 36002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01792 845 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 258 271 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bhi05g01792 845 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 309 321 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bhi05g01792 845 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 451 462 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bhi05g01792 845 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 597 614 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bhi05g01792 845 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 749 758 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bhi05g01792 845 Gene3D - 413 753 IPR027417 -
Bhi05g01792 845 Pfam MCM OB domain 236 365 IPR033762 -
Bhi05g01792 845 Gene3D - 125 230 - -
Bhi05g01792 845 ProSiteProfiles MCM family domain profile. 435 641 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bhi05g01792 845 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 89 844 IPR031327 GO:0003677|GO:0005524|GO:0032508
Bhi05g01792 845 MobiDBLite consensus disorder prediction 46 68 - -
Bhi05g01792 845 Gene3D - 263 315 - -
Bhi05g01792 845 Pfam MCM N-terminal domain 134 232 IPR027925 -
Bhi05g01792 845 ProSitePatterns MCM family signature. 544 552 IPR018525 GO:0003677|GO:0005524|GO:0006260
Bhi05g01792 845 PRINTS Mini-chromosome maintenance (MCM) protein family signature 476 491 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bhi05g01792 845 PRINTS Mini-chromosome maintenance (MCM) protein family signature 536 550 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bhi05g01792 845 PRINTS Mini-chromosome maintenance (MCM) protein family signature 564 577 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bhi05g01792 845 PRINTS Mini-chromosome maintenance (MCM) protein family signature 588 600 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bhi05g01792 845 PRINTS Mini-chromosome maintenance (MCM) protein family signature 615 623 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bhi05g01792 845 PANTHER DNA REPLICATION LICENSING FACTOR MCM4 89 844 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bhi05g01792 845 Pfam MCM AAA-lid domain 661 747 IPR041562 -
Bhi05g01792 845 Gene3D - 754 836 IPR036388 -
Bhi05g01792 845 MobiDBLite consensus disorder prediction 1 118 - -
Bhi05g01792 845 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 446 761 IPR027417 -
Bhi05g01792 845 SUPERFAMILY Nucleic acid-binding proteins 152 386 IPR012340 -
Bhi05g01792 845 SMART mcm 232 749 IPR031327 GO:0003677|GO:0005524|GO:0032508
Bhi05g01792 845 MobiDBLite consensus disorder prediction 1 34 - -
Bhi05g01792 845 Gene3D - 236 375 IPR012340 -
Bhi05g01792 845 CDD MCM4 438 747 - -
Bhi05g01792 845 Pfam MCM P-loop domain 423 645 IPR001208 GO:0003677|GO:0005524|GO:0032508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01792 Bhi-Chr5:56919772 Bhi09g00842 Bhi-Chr9:18490675 9.43E-116 dispersed
Bhi05g01791 Bhi-Chr5:56919772 Bhi05g01792 Bhi-Chr5:56919772 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01792 K02212 - csv:101211850 1577.38