Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi05g01796 | CCCAAGTTGGGTGCTATTGCCCCCACCACTTTCATCTCTTTTAAAAGAAAATTTAGAGTAAAAAAGAGAGAAGGCCATGGCCGATTTTTCTAGAGCTTTTCTTAAAATGTCAGAATAACAATAAAAGAGAGCTTCAATCTTAGCTGTTGTCTTGTCCAGTAATGGAGATGAGCCCATAATTCTTTGTCTCCATCTTCCTCGCTTTAAATTCACCTCTCTTTCAATCCTTCCGTGCGGTGGAAATTCGAGATTCGATTCGGTTTGATTCCAATCGATTTCGTTTTGGAATTCATGAAGATCCGCTGTGATGTTTGTGATCAAGCTGAGGCCTCTGTTTTTTGTTATGCTGATGAAGCTGCTCTTTGCCATGCTTGTGATCTCCATGTTCATCGCGCTAATAAACTCGCTGGAAAACACTCTCGATTCTCTCTACTTCAACCGATCAAAAAGGATTCTCCTCGTTGCGATATCTGTCAAGAACGAAGAGCGCTTGTATTCTGTCAACAAGATAGGGCAATTCTTTGTAGAGAATGCGACATTTCGATTCACGAAACGAACGAACATACACAGAAACACAATCGATTTCTTCTTACAGGTGTGAAGCTTTCTTCGACTTGTTTTTCGTATCAAACGTCTTCGTCTTCCAATGGCTGTGATGCCGCCATGGATGTTAAAACTGGAAGCTCCAACGCTTGCAGCAAAAGACCTAAAATGGCCGCGAATGAAATCTCGAGCTCTCATTCTGGTGAAAAAGCTACTCCGCCGTCGACGAGTAATTACAAGGTTGAAGACGGCCAAGGAAGCGACGGCGGTTCGTTCTCGACGAGCAGCATATCGGAATATTTGGAGACATTGCCGGGATGGTGTGTGGAGGAGTTTCTAGATCCTTCCGCCGCTGCCAATCGTTTCTTTTGATGGAGAAATTCTGGAATTTGGGAATCAAAATCTGGAAAGGCAACAAGAATCACCAAACACTGCCAAGAACACCTTGGAGAATTTAGGTAAAAATTCTCAAACTATAAGTAGTAGGTGTTGGAATGGAGTACTTGGG | 1051 | 42.91 | MKIRCDVCDQAEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPRCDICQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNGCDAAMDVKTGSSNACSKRPKMAANEISSSHSGEKATPPSTSNYKVEDGQGSDGGSFSTSSISEYLETLPGWCVEEFLDPSAAANRFF | 207 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 57052763 | 57054649 | + | XM_039031923.1 | Bhi05g01796 | 36006 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi05g01796 | 207 | Gene3D | Classic Zinc Finger | 1 | 99 | - | - | |
| Bhi05g01796 | 207 | MobiDBLite | consensus disorder prediction | 131 | 176 | - | - | |
| Bhi05g01796 | 207 | Pfam | B-box zinc finger | 3 | 44 | IPR000315 | GO:0008270 | |
| Bhi05g01796 | 207 | Pfam | B-box zinc finger | 55 | 92 | IPR000315 | GO:0008270 | |
| Bhi05g01796 | 207 | ProSiteProfiles | Zinc finger B-box type profile. | 53 | 100 | IPR000315 | GO:0008270 | |
| Bhi05g01796 | 207 | PANTHER | B-BOX ZINC FINGER PROTEIN 20 | 1 | 206 | - | - | |
| Bhi05g01796 | 207 | CDD | Bbox1_BBX-like | 5 | 47 | - | - | |
| Bhi05g01796 | 207 | ProSiteProfiles | Zinc finger B-box type profile. | 1 | 47 | IPR000315 | GO:0008270 | |
| Bhi05g01796 | 207 | CDD | Bbox1_BBX-like | 58 | 100 | - | - | |
| Bhi05g01796 | 207 | PANTHER | B-BOX ZINC FINGER PROTEIN 22 | 1 | 206 | - | - | |
| Bhi05g01796 | 207 | SMART | bboxneu5 | 4 | 47 | IPR000315 | GO:0008270 | |
| Bhi05g01796 | 207 | SMART | bboxneu5 | 53 | 100 | IPR000315 | GO:0008270 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi05g01796 | Bhi-Chr5:57052763 | Bhi10g01956 | Bhi-Chr10:48774845 | 4.72E-69 | dispersed | |
| Bhi05g01795 | Bhi-Chr5:57052762 | Bhi05g01796 | Bhi-Chr5:57052763 | 1.18E-154 | tandem |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 1257 | PF00643 | zf-B_box | 2.30E-07 | No_clan | Bhi | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi05g01796 | - | - | bhj:120077848 | 408.297 |