Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01842 TCTTCTGGGTTCTGACCTTATCCAAAATGGTGGTGCATTCAAATAACAGTGCTTTATTTATCTGTTATAAGAAATAAATACACTACCTCTGTATTAATAAACAACTCTCTCTTTTTTCTCTCTCTCTATCCGACTCATCAATTGAGAAAAAAAAATCAGGCATTTAACCTAGAACCAAAACCACACACCCAATTTTGGCTTTTCCTCAAACTTTCCCTCGTTTCTCATTGGGGCATTTACTCATTACTTTCTTCATACAGTTGTTAAAGCCTCCTTTTTTCTTGTTCCTTTTGCCATTTGTGCAAAAATTGCTTTATGGGTATGTTTTTATTTGCTTGAATTTTGGTGTTTTTCAGGTTTGGTTTCCATTCTTTTCAGCTGGTATCCGTCATCCACTCGTCTTCCAATGAAAGGATTGAAATTTGACTGAAAAAAAAAAAATCCAAAGTCTTAACATATTGAGTGTTTCAATGTGTCACTTGAGATCTAACCTAAAAGGGGAATCTTGTCATTCTTATTTACATCAGAAGATGATGCTCTTTTGAAGCCAAGAAAGAAAATGGGTGGTTGTGTCTCTACAAGCAGCCATAGTGCATGTAGTAGCCAAAGCAATGGGGAATCAGTTTCTTCTTCATGTTTGGGAATTGAATTTCGAGGTCGAAAGCGAACAAAAAGAACATTCTCCGACCATGTTTATGCTCTTCAGAATCTTCCTTCAGCTCCCAACAGGATTTTCATGAATGGAAAAAGTCGGTCTTCTTGCATTTTCACTCAACAAGGTCGCAAGGGCATAAACCAGGATGCCATGGTTGTGTGGGAAGATTTCATGTCAGAGGACACGATCTTTTGTGGTGTATTCGATGGACATGGACCTTACGGTCATCTCGTTGCTCGAAAAGTGAGGGATACATTGCCTATTAAGTTGTTGTCATTCTTCCAGTCTCCTCAGTTGAAGCAAAATGACTCTGGTAAAACCTGTTTCCAGAGGAATTTGAAGACACCTCCTGATTGTGAAGATTCTGAGAAGGATGGTTTTGTAGAGGACTCACAGAATTCGGTTTGGAGAGATGCATTTTTGAACTCATATAAAGCTATGGATAAGGAGTTGAGATCACATCCTAATCTGGACTGCTTTTGCAGTGGTAGTACTGCAGTCACCATAGTTAAACAGGGGTCAAATCTCTTCATGGGGTATATAGGGGACTCGAGAGCAATCCTCGCTTCAAAGGACGCCAATGATTCCACAGTGGCAGTTCAATTGACCGTGGATCTTAAGCCAGATTTGCCAAGAGAAGCTGAAAGAATAAAACGATGTAAAGGTAGGGTCTTTGCATTGCAGGATGAACCTGAAGTGCCAAGGGTGTGGTTACCTTTTGACGATGCACCTGGTTTGGCAATGGCTCGAGCATTTGGTGACTTCTGTTTGAAAGAATATGGAGTTATCTCTATACCTGAATTCTCTCATCGAACCCTCACTGACGCGGATCAGTTCATCGTTCTTGCATCAGATGGGGTATGGGATGTGTTGAGCAATGAAGAGGTGGTTGATATAGTGTCCTCGGCCCCAACCCGGGCATCAGCTGCGAGGTCTGTGGTGGACTCTGCTGCTCGTGAATGGAAACTTAAATACCCTACCTCAAAAATGGATGACTGTGCTGTCGTCTGCTTATTTTTGGACGGGAAGATGGACTCCGAATCCGACTGTGACGAACAAGGCTTCTCATCTGCAACATTGCGTAGTAATCATTCGGGTACTGCTATTGAATCCGATGATGGCCAGAGGTCTGAACCATGTTTGCAAAGGAATAACACCGTCAGATCATCCGAAGAAAGCAAGGAATTACCTGTCGACGATGGGGAGATTGGTGATGCTGTACCTGCAGAAGATCAAAACTGGTTGGGTTTGGAAGGAGTCACTCGAGTGAACTCGCTTGTTCAACTTCCTAGATTTTCCGAGGAAAGGCCAGCAGTGTCATAGGTTTTATAAAATTCTGGGACTGTTAATCCAAAATGGAAAAGTAAATCTTTCAAACTGGCTGCTGGGTTAAAGGTTTATGCAGGTACATTTTTGCTACCAGTGTATGTTGAATTGCACAAAAGTTTACTGCTTTCATAGATCAACTAAATTGGTTCAATGAATGTCAATTATCAATATCCTTTCCCCAAAATGAAAATGGATTACCTAAACACCAGATTTTGCTGCTCATCTTAGGGGACCATGGAATCTTATTTAAGTTACCAAACTAAACCAATTCGACAATGTGGTAAGAACCAGGTTCTTAACTTTTCGTTTCATAGCAAACTAAACCAACAAGTTCTACGAGGAGAATAGTGCAATCAGTTGGCAGAAACAACCAACAGATGGAGAGCAAAATTGATTCTTTGG 2386 40.99 MGGCVSTSSHSACSSQSNGESVSSSCLGIEFRGRKRTKRTFSDHVYALQNLPSAPNRIFMNGKSRSSCIFTQQGRKGINQDAMVVWEDFMSEDTIFCGVFDGHGPYGHLVARKVRDTLPIKLLSFFQSPQLKQNDSGKTCFQRNLKTPPDCEDSEKDGFVEDSQNSVWRDAFLNSYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAILASKDANDSTVAVQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRTLTDADQFIVLASDGVWDVLSNEEVVDIVSSAPTRASAARSVVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDCDEQGFSSATLRSNHSGTAIESDDGQRSEPCLQRNNTVRSSEESKELPVDDGEIGDAVPAEDQNWLGLEGVTRVNSLVQLPRFSEERPAVS 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 57998946 58002982 - XM_039031713.1 Bhi05g01842 36052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01842 472 PANTHER ALPHABET, ISOFORM E-RELATED 1 459 - -
Bhi05g01842 472 SMART PP2C_4 55 370 IPR001932 -
Bhi05g01842 472 MobiDBLite consensus disorder prediction 383 419 - -
Bhi05g01842 472 ProSiteProfiles PPM-type phosphatase domain profile. 66 372 IPR001932 -
Bhi05g01842 472 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 459 - -
Bhi05g01842 472 Gene3D - 57 374 IPR036457 -
Bhi05g01842 472 CDD PP2Cc 65 372 IPR001932 -
Bhi05g01842 472 MobiDBLite consensus disorder prediction 383 442 - -
Bhi05g01842 472 MobiDBLite consensus disorder prediction 1 23 - -
Bhi05g01842 472 SUPERFAMILY PP2C-like 56 374 IPR036457 -
Bhi05g01842 472 Pfam Protein phosphatase 2C 167 349 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01840 Bhi-Chr5:57998946 Bhi05g01842 Bhi-Chr5:57998946 0 dispersed
Bhi05g01842 Bhi-Chr5:57998946 Bhi05g01844 Bhi-Chr5:57998946 0 dispersed
Bhi05g01841 Bhi-Chr5:57998946 Bhi05g01842 Bhi-Chr5:57998946 0 tandem
Bhi05g01842 Bhi-Chr5:57998946 Bhi05g01843 Bhi-Chr5:57998946 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01842 - - csv:101204594 908.672