Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01853 AAATCTTTTTCTCTTCTCTCATTCAACTTATTAAATTAACCCCACACTCTTCTTCATCTTCCTCTCACAAACTACCAAATCTCTCCATTTTTGTCTTTCAATTCACATCCCCAACACGCCGCCGCATCCTCCGCCGTCCATTTCCCACGTCTCCGCCCCCGCTCCGCCGCTCTCTCGCTCCATCAAATGGGTTTCTCATCCGACTCTGTTTTTTCTTCAACCGGATAAAACCCTGTTTCATTCCAGTTCCATCCACTTCATTCCCAAATTCTCTTCCAGTTTCTTATAAATAAACACTTTGTTTCCTGAATTTCCCGACTTTTTTTCTTTCTATTTTGCGAGCGAGAGGTGTGAGCATAGTAAGGTCTATGTTTTTATCCATGGCGGAGGATAAGAAAACAGGAAAATTGAAGATGGTTATCGATGAAAAAACCCAGAAATTTCCAGAGAAGAAGGTTGAAAAAGGCAAAGATGTTGCAGCAATTAGCTCAGAGAGGCAACAATGGAAGCCAGTTTTAGATGATGCTTTCTTGTCTAGAAGACCTCTCAAGAAAATCTGCAGTTCAGATTTTCATAACCCATTTCTTCATTCCCCTGTTTCTCTTTCTCCCCCTTCTTCAAAAATCCAATTCCCTTTCGATTTCGAAGCATCTCAACAATCAACAGTGACAACAACTCCATTCAATTCTCAACAACCGATTTCTTCCTCCTCTTCTTCTTCCTCTCCCTTTACGACAATCGGGTCACCGGAGCAACAGATGATTTCTTTTAGCTCCAATCAACAACAGGGGTTTGGCTATCCGCCATACTTTCTCAACGGCGACCCGGTGGCATCGCAGCAGAGACTTTTCAAGTACTGGAGCGATGATTTTCATTTGAGTCCAAGAGGAAGAGCTATGATGATGAGCAGATTAGGCCCAGATGGAGGTAACTTGTTTCGACCGCCATTGCAGCCCATAAGTGCCACTAAGCTTTACAGAGGAGTTAGACAGCGGCATTGGGGCAAATGGGTGGCTGAAATTCGTCTCCCTCGTAATCGAACTCGTCTTTGGCTCGGCACCTTTGACACTGCTGAAGACGCAGCCATGGCTTACGATCGCGAAGCATTCAAATTACGAGGCGAAAATGCTCGACTCAATTTCCCTGATCGTTTCCGTAACAAAGACATCCCAAAAACAGAGCCAGAAACAGAGCACACAATTCCAATAACAGAGGAGGCTCATCCAGAAAGCGTTGTCGTTCTTCCACCGCCAGAGGAAGAAAAACCGGATGAACAGCTGATGGAGAACGGCGGCTGCGTGCCGGAGCCGCCGGAGATGGTATGGGGAGAAATGGAAGAGGCTTGGTTTAATGCAATTCCGGCCGGTTGGGGTCCGGGAAGCCCTGTTTGGGATCATTTAGACACAACAAACAATTTGGTTCTTCAATCACAAATCCCATTTGGTTCTTCAAATCAGCAACAGATGAATGAATCCGATGATAATCAGAACAAGATTGAAAATTCCGAATCCACTTCATCTTCGTCTTCCTCTGCTCCGATGAAGCTTTTCTTATGGAAAGATCAAGATTGAAAATTAGATTTCTCTCTTCTTTTCTTCTGAAATTTTACTCCATTGGATCATTCGATTTGGTCGCATGTTTTTGGAAGACCAATCCAATGGTTTAGGCATCATAAAGATGGAATTTCTTTGATGAGATTCTTGATTTTATGTTGTTTGTTCGTATTTTTTAGTGCATTGTGAAGAAGAACCGTGGAAGGAGGGGCATTGAGGCGTATTTTTTTGATCTCTTTCCCCTTCTTCGTTGGTGCGTCATTGTTCCATCAAAGCCATTGTTTTTAGGCTTTCATGGCGGATTTTAGTTGTCTTTGTATTTTATGTTTCTTCTCTCTTTTATATTCCATTTTTAGGGTTTCCTTTTGCCTTTTATATTGTGTAATCTACATCTTTATGTTATAACCATTTTTTTAGGTCAACATGGTGTGAAATTTGAG 1993 42.55 MFLSMAEDKKTGKLKMVIDEKTQKFPEKKVEKGKDVAAISSERQQWKPVLDDAFLSRRPLKKICSSDFHNPFLHSPVSLSPPSSKIQFPFDFEASQQSTVTTTPFNSQQPISSSSSSSSPFTTIGSPEQQMISFSSNQQQGFGYPPYFLNGDPVASQQRLFKYWSDDFHLSPRGRAMMMSRLGPDGGNLFRPPLQPISATKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFKLRGENARLNFPDRFRNKDIPKTEPETEHTIPITEEAHPESVVVLPPPEEEKPDEQLMENGGCVPEPPEMVWGEMEEAWFNAIPAGWGPGSPVWDHLDTTNNLVLQSQIPFGSSNQQQMNESDDNQNKIENSESTSSSSSSAPMKLFLWKDQD 400
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 58150471 58152463 + XM_039032314.1 Bhi05g01853 36063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01853 400 Pfam AP2 domain 203 251 IPR001471 GO:0003700|GO:0006355
Bhi05g01853 400 SUPERFAMILY DNA-binding domain 202 261 IPR016177 GO:0003677
Bhi05g01853 400 MobiDBLite consensus disorder prediction 358 392 - -
Bhi05g01853 400 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 7 289 - -
Bhi05g01853 400 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 298 397 - -
Bhi05g01853 400 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF053 7 289 - -
Bhi05g01853 400 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF053 298 397 - -
Bhi05g01853 400 MobiDBLite consensus disorder prediction 99 126 - -
Bhi05g01853 400 CDD AP2 201 260 IPR001471 GO:0003700|GO:0006355
Bhi05g01853 400 SMART rav1_2 202 265 IPR001471 GO:0003700|GO:0006355
Bhi05g01853 400 Gene3D AP2/ERF domain 202 260 IPR036955 GO:0003700|GO:0006355
Bhi05g01853 400 PRINTS Ethylene responsive element binding protein signature 203 214 IPR001471 GO:0003700|GO:0006355
Bhi05g01853 400 PRINTS Ethylene responsive element binding protein signature 225 241 IPR001471 GO:0003700|GO:0006355
Bhi05g01853 400 MobiDBLite consensus disorder prediction 358 400 - -
Bhi05g01853 400 ProSiteProfiles AP2/ERF domain profile. 202 259 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01853 Bhi-Chr5:58150471 Bhi09g02625 Bhi-Chr9:70833421 6.47E-33 dispersed
Bhi12g00150 Bhi-Chr12:4558608 Bhi05g01853 Bhi-Chr5:58150471 1.06E-25 dispersed
Bhi10g01151 Bhi-Chr10:24175453 Bhi05g01853 Bhi-Chr5:58150471 3.04E-82 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1262 PF00847 AP2 2.60E-13 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01853 - - bhj:120078099 773.467