Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01939 CGTACAGAAATAAAACCGGTCACTCTTAATCCCCAACTAAAACATTATAATTTAGTGCGTAATTGCTTGCACGTCCTTAATAAACAAACATAGTCTGCCAATCTGTCACCATGACTACTCTTTGTATTAAACCTCATCTAATTCTCTCACTCTTTCCCTTATTCAATCTCTCCGACCAAATCCCAATTCCCTTTTTTCTCTCTAATCTCAGCCCTACGATTGATCCTCATCTAACAATTTCCTACCGCCGGATTTTCTTAATCTCATCGATTCTCTGACGCTGTTCCGCCCATGGACCGCCGTGTTCGTACCAACCCATTTGTCTCCGAGCAAGAAGATCCTGAACCCACGTCCGACGACGGCTTACCGGAATCACCCTCCGACGGCAATGACTCAAAACCCGCCGCCGGTCCACCTCCCAAAAAGAGAAGGGGAGTGCAGAAGCGAGTGGTGTCCGTACCGATCAGTGACGTGGAAGGATCTAAGAGCAAAGGGGAAGCATATCCACCGTCCGATTCATGGGCATGGAGAAAATACGGCCAAAAGCCAATCAAAGGCTCTCCTTATCCCAGGGGATATTATCGATGTAGTAGCTCCAAGGGCTGCCCAGCAAGAAAGCAAGTAGAGAGAAGCCGTGTGGACCCCAGCAAGCTCGTTATTACCTACGCTTTCGACCACAACCACCAACTCCCGGTTACCAAATCTCACCACCACCACCACAATTCCTCCCCGTCCTCCGCCGTGATCGCCGCCGCATCCGCCGCAGCCGACTCTTCGTCCCCAGGGAGCACTACGACGTCGTCCTCCACTTCCTCCGGCGACAATACCAACGCCGCTCCGTCATCGCCGGCGGCGGCGGCGAAGTTCGAGGAGGCGGCTGCGGTTTTCGCGAGCCAGCCGGAACTGGAACTCGGCGGCGACTCGCTGATGATAAAACCGTGCATCGGCGATTTCGGGTGGTTGGCTGACGTGGCGTACGACAGAATCCTGGAGGGCCCGATTTGCGGGGGAGGCGACATATTCGACGACGCCGATGTAATGGTTTTGTCCACAAGAGGAGATGACGAGGAAGAGTCGTTATTTGCGGATCTTGGGGAATTACCCGAAGGCTCCGTGGTTTTCGGCCGACGGCGACCGGTCCAACCGGACGGACCGAACCGGACATGTGGCACAGTTTTAGATTGCTAGGGTTTTTATTTTTCTTTTTTTATTTTTTTTTCCTTCTAGGATTTGGTTCGTTCGTTTGCAATTGCCAATTGGTGATTGCTGTGGAAAACTTTACAAACAGAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGGATTTTTCTTTATAATTTATAATAATAATTTTTTTTTTTAATTTAGTTTTAAAATGGGTTTCTGTTGTACAGTGAAAGATAGTGAAGAATATTGAGAAATAATGGAATGCTGTTTCCCTTTTGAGTTTGAG 1450 49.24 MDRRVRTNPFVSEQEDPEPTSDDGLPESPSDGNDSKPAAGPPPKKRRGVQKRVVSVPISDVEGSKSKGEAYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPSKLVITYAFDHNHQLPVTKSHHHHHNSSPSSAVIAAASAAADSSSPGSTTTSSSTSSGDNTNAAPSSPAAAAKFEEAAAVFASQPELELGGDSLMIKPCIGDFGWLADVAYDRILEGPICGGGDIFDDADVMVLSTRGDDEEESLFADLGELPEGSVVFGRRRPVQPDGPNRTCGTVLDC 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 60228860 60231903 + XM_039033060.1 Bhi05g01939 36149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01939 298 Pfam WRKY DNA -binding domain 75 132 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi05g01939 298 MobiDBLite consensus disorder prediction 135 187 - -
Bhi05g01939 298 MobiDBLite consensus disorder prediction 145 185 - -
Bhi05g01939 298 PANTHER OS01G0750100 PROTEIN 22 282 - -
Bhi05g01939 298 SUPERFAMILY WRKY DNA-binding domain 69 134 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi05g01939 298 SMART WRKY_cls 73 133 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi05g01939 298 ProSiteProfiles WRKY domain profile. 74 134 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi05g01939 298 MobiDBLite consensus disorder prediction 1 113 - -
Bhi05g01939 298 Gene3D WRKY domain 59 135 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi05g01939 298 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 22 282 IPR044810 GO:0003700
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00195 Bhi-Chr3:4389864 Bhi05g01939 Bhi-Chr5:60228860 4.56E-35 dispersed
Bhi05g01939 Bhi-Chr5:60228860 Bhi08g02157 Bhi-Chr8:61842228 1.20E-45 dispersed
Bhi11g01261 Bhi-Chr11:37277686 Bhi05g01939 Bhi-Chr5:60228860 3.94E-31 dispersed
Bhi05g01939 Bhi-Chr5:60228860 Bhi05g01940 Bhi-Chr5:60228874 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1268 PF03106 WRKY 8.00E-25 CL0274 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01939 - - csv:101209422 488.804