Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01940 ACCGGTCACTCTTAATCCCCAACTAAAACATTATAATTTAGTGCGTAATTGCTTGCACGTCCTTAATAAACAAACATAGTCTGCCAATCTGTCACCATGACTACTCTTTGTATTAAACCTCATCTAATTCTCTCACTCTTTCCCTTATTCAATCTCTCCGACCAAATCCCAATTCCCTTTTTTCTCTCTAATCTCAGCCCTACGATTGATCCTCATCTAACAATTTCCTACCGCCGGATTTTCTTAATCTCATCGATTCTCTGACGCTGTTCCGCCCATGGACCGCCGTGTTCGTACCAACCCATTTGTCTCCGAGCAAGAAGATCCTGAACCCACGTCCGACGACGGCTTACCGGAATCACCCTCCGACGGCAATGACTCAAAACCCGCCGCCGGTCCACCTCCCAAAAAGAGTAGAAGGGGAGTGCAGAAGCGAGTGGTGTCCGTACCGATCAGTGACGTGGAAGGATCTAAGAGCAAAGGGGAAGCATATCCACCGTCCGATTCATGGGCATGGAGAAAATACGGCCAAAAGCCAATCAAAGGCTCTCCTTATCCCAGGGGATATTATCGATGTAGTAGCTCCAAGGGCTGCCCAGCAAGAAAGCAAGTAGAGAGAAGCCGTGTGGACCCCAGCAAGCTCGTTATTACCTACGCTTTCGACCACAACCACCAACTCCCGGTTACCAAATCTCACCACCACCACCACAATTCCTCCCCGTCCTCCGCCGTGATCGCCGCCGCATCCGCCGCAGCCGACTCTTCGTCCCCAGGGAGCACTACGACGTCGTCCTCCACTTCCTCCGGCGACAATACCAACGCCGCTCCGTCATCGCCGGCGGCGGCGGCGAAGTTCGAGGAGGCGGCTGCGGTTTTCGCGAGCCAGCCGGAACTGGAACTCGGCGGCGACTCGCTGATGATAAAACCGTGCATCGGCGATTTCGGGTGGTTGGCTGACGTGGCGTACGACAGAATCCTGGAGGGCCCGATTTGCGGGGGAGGCGACATATTCGACGACGCCGATGTAATGGTTTTGTCCACAAGAGGAGATGACGAGGAAGAGTCGTTATTTGCGGATCTTGGGGAATTACCCGAAGGCTCCGTGGTTTTCGGCCGACGGCGACCGGTCCAACCGGACGGACCGAACCGGACATGTGGCACAGTTTTAGATTGCTAGGGTTTTTATTTTTCTTTTTTTATTTTTTTTTCCTTCTAGGATTTGGTTCGTTCGTTTGCAATTGCCAATTGGTGATTGCTGTGGAAAACTTTACAAACAGAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGGATTTTTCTTTATAATTTATAATAATAATTTTTTTTTTTAATTTAGTTTTAAAATGGGTTTCTGTTGTACAGTGAAAGATAGTGAAGAATATTGAGAAATAATGGAATGCTGTTTCCCTTTTGAGTTTGAG 1439 49.41 MDRRVRTNPFVSEQEDPEPTSDDGLPESPSDGNDSKPAAGPPPKKSRRGVQKRVVSVPISDVEGSKSKGEAYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPSKLVITYAFDHNHQLPVTKSHHHHHNSSPSSAVIAAASAAADSSSPGSTTTSSSTSSGDNTNAAPSSPAAAAKFEEAAAVFASQPELELGGDSLMIKPCIGDFGWLADVAYDRILEGPICGGGDIFDDADVMVLSTRGDDEEESLFADLGELPEGSVVFGRRRPVQPDGPNRTCGTVLDC 299
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 60228874 60231903 + XM_039033059.1 Bhi05g01940 36150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01940 299 ProSiteProfiles WRKY domain profile. 75 135 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi05g01940 299 SMART WRKY_cls 74 134 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi05g01940 299 SUPERFAMILY WRKY DNA-binding domain 70 135 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi05g01940 299 MobiDBLite consensus disorder prediction 136 188 - -
Bhi05g01940 299 PANTHER OS01G0750100 PROTEIN 21 283 - -
Bhi05g01940 299 Gene3D WRKY domain 60 136 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi05g01940 299 MobiDBLite consensus disorder prediction 146 186 - -
Bhi05g01940 299 MobiDBLite consensus disorder prediction 1 114 - -
Bhi05g01940 299 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 21 283 IPR044810 GO:0003700
Bhi05g01940 299 Pfam WRKY DNA -binding domain 76 133 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01940 Bhi-Chr5:60228874 Bhi08g02157 Bhi-Chr8:61842228 5.87E-46 dispersed
Bhi12g00774 Bhi-Chr12:23250334 Bhi05g01940 Bhi-Chr5:60228874 5.25E-27 dispersed
Bhi05g01939 Bhi-Chr5:60228860 Bhi05g01940 Bhi-Chr5:60228874 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1269 PF03106 WRKY 8.00E-25 CL0274 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01940 - - csv:101209422 494.967