Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01952 TGCTTACCCCAAATGTTATGAAGCCACGCAATTTCTGCCCCATACCGTCTTTCTCTCTCCTCTTGTTTTCTCTCTCCTCTGTTTCTCCAACTATTTAAACTCTTCTTCTCTGTTCTTATTCTTCTACCTCTTCTTCGTTTGCCCTAATTTTTCAGTTCTTCAAATGAGCAGTGTTTGTACTGAGCAACACAAATTTCAATTTCCATTTCAGTTTCAGTTTCCATCTTCTTCTTCTTCGTGTTCTTCATCTTTTCTCAAGGACATTAACGTTCCGCCGAGGAAGCTTCTTGCTGCGGTGAGACGAGAAAACGGTGAAATGTGTTCTGATTCGCCGCGGTTTTCGTTTGCTGTTGAATCTCTTTTGCAGAAATTTTTGCCGTTTAATGGTGAGGATGAAGTGGAGGAGGATGGAGATCCGTATTCGTCAGATCATTTTAGGATGTATGAGTTTAAGGTGAGGCGGTGTACTCGTAGTCGGAGTCATGATTGGACGGATTGTCCGTTTGCTCATCCTGGAGAGAAGGCACGGCGGCGAGATCCTCGTCGTTTTCATTACTCTGGTACCATGTGTCCGGAGTTCCGTCGCGGCGGTTGTGGTCGTGGTGATGGATGTGAGTTCGCTCATGGAGTTTTTGAATGTTGGCTTCATCCGGCGAGGTATCGGACTGAGGCTTGTAAAGATGGAAAGAATTGTAAGAGGAAGGTTTGTTTCTTTGCTCATTCACCTCGTGAGCTTCGTCTTTTGCCTCCTGTGAGTAATTTTCAAGGCGGCGGCTCTTGTTCTTCGCCGAATAAGAGAAATTCTACTCTTAGGTCGGCTTCTGCCGGTTCTAATCACTGCTGTTTGCTTTGTCATTGTGGTGGAGCCGCCGCCGCCACTTCCTCACCGACTTCGACGCTTTTTGGAATGTCTCATCTGTCACCACCGCTCTCTCCGCCGGTCTCGCCCGGAAAACCTCGGTCATCGATGAATGGATTTTCGCCGATTTCGAGGTACAATAATCCTGATCAGTCTAAGTTTAATGGAGTTTTGAGCTATAAAGATGCACTGACTGAGCTGATGAGCTCAATTGAATCCATGAATATCGATGACGCTAATGCTACTTTAGCCGCCGCCGCCGCCGCCGCTTCTCCAAGACAGACGATTCCTTGGATCGATGTTTCGTCTCTGAACAATGAGGATCAACTACAGTTTGTTCTCTCACCTTCTACTCCAAATGTCTCCACCGCATCGATGAACTTCCCCGTCGAGAACAAAGGTAACAACAATGGATGGACCTCCGCCTCCGATCCGGATCTCGGATGGGTTAATGATCTGCTGATGTAAACTAAAGAAGAAGAAGAAATAACACTTTTTGAGAGGGAACTGTAAATATTACACCATCCGTATATATAGCAGTTATTATATATATGGGTGAGGTGTGAAAAAAAATAGTCATTAATAATCATTGTGAATTATT 1460 45.14 MSSVCTEQHKFQFPFQFQFPSSSSSCSSSFLKDINVPPRKLLAAVRRENGEMCSDSPRFSFAVESLLQKFLPFNGEDEVEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRELRLLPPVSNFQGGGSCSSPNKRNSTLRSASAGSNHCCLLCHCGGAAAATSSPTSTLFGMSHLSPPLSPPVSPGKPRSSMNGFSPISRYNNPDQSKFNGVLSYKDALTELMSSIESMNIDDANATLAAAAAAASPRQTIPWIDVSSLNNEDQLQFVLSPSTPNVSTASMNFPVENKGNNNGWTSASDPDLGWVNDLLM 387
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 60517018 60518477 - XM_039031592.1 Bhi05g01952 36162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01952 387 ProSiteProfiles Zinc finger C3H1-type profile. 131 157 IPR000571 GO:0046872
Bhi05g01952 387 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 2 33 386 - -
Bhi05g01952 387 PANTHER UNKEMPT FAMILY MEMBER 33 386 IPR045234 -
Bhi05g01952 387 Gene3D - 130 193 - -
Bhi05g01952 387 SMART c3hfinal6 130 156 IPR000571 GO:0046872
Bhi05g01952 387 SMART c3hfinal6 165 188 IPR000571 GO:0046872
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01952 Bhi-Chr5:60517018 Bhi09g03180 Bhi-Chr9:81372786 2.59E-65 dispersed
Bhi05g01952 Bhi-Chr5:60517018 Bhi02g01932 Bhi-Chr2:51940094 7.61E-66 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1271 None None None None Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01952 K23047 - csv:101211149 595.504