Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01953 CAGATGTCCTAAAGTCAAACCTATCTATTTATATCCCACCTGCCTTCTCTCTCTCTCTCCAAAACTCTGTTTCTCTTGAACAAAAAAATTAACGAAAAACCCAATGACCACTGGAAGGGAAATTCTGCACAAGATGAAGGTGAAGGCAGGATTTTTTTCATCGGCAGCGGATGCAGGAGGGAAAGGCAAAGGCAAAGTGATGAATAAGAATAGTATAAGTCACGGGAGTTATTTGGTTAAGGGAAAAGCTAACCATCCAATGGAAGATTATTTAGTCACCGATTTCAAGAGAGTCAAAGAACATGATTTGGGTTTGTTTGCCATTTTTGATGGACATTTGGGGCATGATGTTGCTAATTTCTTGCAAAATCATCTCTTTGATAACATCCTCAAACAGGCTGATTTCTGGAGCGAAACAATAAAAGCCATAAAAAGAGCTTACAAGAAAACAGACGAAGAAATATTGGATAAAGTGAAGCAACTTGGAAAAGGAGGATCAACGGCTGTTACTGCGATTTTAATCGACGGCCACAAACTTGTGGTTGCCAACGTTGGAGATTCTAGAGCTGTTTTGTGCAAAAACGGCGTCGCTGAACAACTTTCCGTTGACCACGAACCCACTAAGGAGAAAAGAGAAATTGAAAGCCGTGGTGGTTTTGTATCAAATCTTCCAGGTGATGTGCCACGTGTCGACGGACAATTGGCGGTAGCCAGAGCATTTGGAGATAAGAGCTTAAAAGTCCACCTCAGCTCAGAACCTGACGTGGAAATCAAAACGGTTGACGAAACTACCGAGTTCATGATTTTGGCTAGCGACGGCATTTGGAAGGTAATGACAAACCGAGAGGCAGTAGAATCAATTAAACATATAAAGGATGCGAACTTAGCGGCCAAACGACTTATCGACGAAGCAGTGTCTAGAAAAAGCAAGGACGACATATCGTGCATTGTTGTTAGGTTTCGATGATTTTTTTTTCCCCTTTTTTCCCTTTTTTTTTTTTAAAAAAAAATAGATGTTATATATCAAAGTGTGGATAATATGGGACGGTAAATTTGTTTTGGCAGTGTCAAGAGTATTTAATATTGATGTAATTACATTTTGTATTATGTTGATTAGTGTTAGTTCATTTCTTTAGGTAAAAGTCCGTTGGACTTTAGTTTAGTATTCAAGATCTTTTTCAATCCCTCTGTAATTGTGGTTGAAACCCTAATGTATCCACCTCTATATATCTCTCTATAATTCTCTC 1247 38.81 MTTGREILHKMKVKAGFFSSAADAGGKGKGKVMNKNSISHGSYLVKGKANHPMEDYLVTDFKRVKEHDLGLFAIFDGHLGHDVANFLQNHLFDNILKQADFWSETIKAIKRAYKKTDEEILDKVKQLGKGGSTAVTAILIDGHKLVVANVGDSRAVLCKNGVAEQLSVDHEPTKEKREIESRGGFVSNLPGDVPRVDGQLAVARAFGDKSLKVHLSSEPDVEIKTVDETTEFMILASDGIWKVMTNREAVESIKHIKDANLAAKRLIDEAVSRKSKDDISCIVVRFR 287
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 60540972 60544205 - XM_039031363.1 Bhi05g01953 36163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01953 287 SMART PP2C_SIG_2 44 286 IPR001932 -
Bhi05g01953 287 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 3 286 - -
Bhi05g01953 287 ProSiteProfiles PPM-type phosphatase domain profile. 39 286 IPR001932 -
Bhi05g01953 287 Pfam Protein phosphatase 2C 49 279 IPR001932 -
Bhi05g01953 287 Gene3D - 33 287 IPR036457 -
Bhi05g01953 287 PANTHER PROTEIN PHOSPHATASE 2C 3 286 IPR015655 GO:0004722|GO:0006470
Bhi05g01953 287 CDD PP2Cc 38 286 IPR001932 -
Bhi05g01953 287 SUPERFAMILY PP2C-like 34 286 IPR036457 -
Bhi05g01953 287 SMART PP2C_4 30 284 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00168 Bhi-Chr3:4146428 Bhi05g01953 Bhi-Chr5:60540972 5.01E-114 dispersed
Bhi05g01953 Bhi-Chr5:60540972 Bhi09g03444 Bhi-Chr9:87052893 1.48E-135 dispersed
Bhi12g01602 Bhi-Chr12:51967003 Bhi05g01953 Bhi-Chr5:60540972 4.81E-35 dispersed
Bhi05g01953 Bhi-Chr5:60540972 Bhi08g00470 Bhi-Chr8:16355090 1.71E-42 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01953 K17506 - csv:101211399 498.434