Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01976 AGAGCATTCCCATCCCAAATTACCTTTTTTCCGCTTCTCTCGTTTCCTTCTCCCTGCCGTTTCTGTTCTTGCAGAAAACCTTCCTCTTGTTTCCGTATTGCCGCTTTGGACGATTAATACTGACTCGCCGAGATATATTCGCCCGCAGTTGATCTGCACCGGGCATCTTGTACCCTGAATACAGATAAAATGGCCTATTTATTCATCTCTGACGAGGAGTTCTCTCGACACTCCGACGACGCCGCTTTTTTGGCCGAGAAGGCCGATGCCTTCATCCAAGGTCTCCGCAGCGAGCTCGAAACCGTCAGAGCCGAAGCTGATGCTGCTTCAATCACTGCGGAGCAGACTTGTTCTCTTCTTGACCAGAAGTTCATCTCTCTTTCCACTGAGTTCTCTGACCTGCAGTCTCAGAATGCACAGCTTCAAACGACCCTTGAACTCAGACTCTCCGAGCTTGCCGAAGTCAAGTCCCAAAAACATCAACTCAATCTACTTTCCATTGGGAAGGATGGGGAGATAGAGAGGTTAAATACAGAGTTGTCTGAACTTCATAAATCAAAAAGACAGTTGATGGAGCTCATCGAGCATAAGGACTTAGAAATTGGTGAAAAAGATTCCACTATAAAGTGTTATCTTGATAAGATTGTCAATCTGTCTGAGACAGCTGCTCAAAGAGAAGCCCGTATAAGTGAGGTCGACATGGAGTTGGTGCGCTCTCGGGCTGAATTCGCTCGTCTTTCACAGGAGAAGGAACTTATTGAGAGGCATAACGTGTGGCTTAATGATGAGTTAACTGCTAAAGTAGGCAATATCATTGAGCTGCGTAGACTTCATTCTGATACCGAGGCTGAACTGTCTGCAAAACTTAGAGATGTTGAGAGACAGTTGGATGAATGCTCTAGCGCCTTAAAATGGAACAAGGATAGTGTGAAAGAACTTGAGATGAAGCTAACATCCGCACAAGAGGAATTGTGTTCGTCAAGAAAAATGGCTGCGGAAAATGAGGAACGTCTTTGTGCTGAAATATCAACAGTCAATAAACTTGTTGAACTTTACAAAGAAAGTTCCGAGGAGTGGTCTAAGAAGGCAACAGAACTTGAGGGTGTCATAAAAGCCTTGGAGACACATTTGAGCCAAATTGAGAGTGATTACAAAGAGAAGCTTGCCAAGGAAGAATCTCAAAGAAATCGTTTGGAAGAGGAGGCTACAGATTTGAAAATGAAACTGGAAAAGTGTGAAGCAGAGATTGAGCTTACTAGGAAAAAGAATGAACTCACTCTTTTTCCCCTCAGCAGCATTGCTCCAGATGCTTTGATAAACGCGAAGGAAAGTAGTGATGTGGTTGGTGACCCCAGGGTTCCTGTAGGTGTTTCTGGGACAGCATTAGCTGCTTCGCTTTTGCGTGATGGTTGGAGTTTAGCCAAAATGTATGCCAAGTACCAGGAGACTGTTGACGCTTTGCGGCACGAGCAGATGGGAAGGAAAGATGCTGAGGCAGTTCTGCAAAAGGTGTTATATGAACTAGAGGATAAAGCAGAAGTCATTTTGGAGGAAAGAGCGGAACATGAGAGAATGATCGAGTCATATTCCCTGTTAAACCAAAAATTGCAGAATTCTATATCTGAACAGGCGATTTTGGAGAAAACTCTTCAGGAATTGAAGGCCGATTTGAAGAGACATGAGCGTGATTACTTGTTAATTCAAAGAGAGAACATTGACCTTTCAAGACAGATTACAATTCTTCTAAAGGAATGTCGAGATGTGCAACTTCGCTGTGGATATGCAGGACATGATGTTCTTGAGAATCTTTCAAAAACTACGTCCTTAGAGATCAACGTGGAATCTGATGCTGATAGAGTTATTTCTGAATATCTTTTAACCTTCAAGGACATAAATGGATTAGTTGAACAGAATGTCCAGCTTAGAAGCCTTGTACGTAAACTTTCTGTGCAGCTTCAAGATGCAGAGCTTGATTTCAAGGAGAACTTGGAGGTTGAACTGAAAAGGAAAACTCAAGAAGCTGCGTCTAGAGTTGAAGCAGTGTTAAAAAAAGTTGAAGAGCAGGGACAGATGATTGAGTCCCTTCATGCTTCCGTTTCCATGTACAAAAGGCTATATGAAGAGGAGCATAAGCGTAATTTGCCTCGTTCTCTGTCTGCTGGAGGTGCTCTAGATTTTGGTAGAAAGGAACTTGAGTTTGTTGCTGAAGATTCTCAGGAAGCCAGAAAGGCTGATCAGGAGCAGGCTGCTAAACGAATAAGATATCTCGAGGAAGAGCTTGAAAAATCTAGAAGCGAGGTAAATTTTGTTAGAGCTGAGCGTAACAAGTTTGAACTGGAGTTGGGTTTCGCGAAAGAAAAACTGGATAGTTTCATGAAGGAATTTGAACAACAGAGAGTAGAGATGAATGGAGTGTTAGCTCGAAATGTAGAGTTCTCGCAACTTATAGTAGACTACCAAAGAAAACTGCGGGAAGTTTCAGAATCCTTGCACAATGCTGATGAAAACTCCCGGAAATTGAGTATTGAGGTGTCTGTCATAAAGTCTGAAAAGGAGTTGTTATCAAATGCTGAAAAGAGAGCACAGGATGAAATTCGAAATCTGTCTGAAAGATTATTCCGTGTGCAGACTTCTCTGGATACTATTCGAAGTGTTGAAGAAGTTCATGAGGAGACTAGGGTTGTAGAAAGGAGGAAACTGGAGGAACATGCTAAGCAACTTGAGAGGGAATGGGCTGAGGCAAAGAAAGAGTTGCAAGAAGAAAGGGACAATGTTCGAACTCTCACTCTTGATCGTGAGAAGACTTTAAAGAATGCAATGAGTCATGTTGAAGAGATGGGGAAGGAACTAGCAAATGCACTACACGCCACTGCTACTGCTGAAGCAAGAGCTGCTGTTGCTGAGGCCAAACTGTCTGATCTAGAGAAGAAAATTAATGCTTCAGATAATCAGGTGGTTGAGTTGGATGATAGGAGTGGACTTAAGTCTCAGCCTTCAAATCAGGTTGCAACAGATTTACGTAGAGCAGAGGCAGAGATTCAGAAATTTAAAGAAGAAGCACAAGCTTGTAAAGATCATATGCTACAGTACAAGAGCATTGCTCAGGTAAATGAAGAAGCTGTGAAACAGATGGAATGTGCTCATGAAACTTTCAAGATTGAGGCTGAGAAAATGAAGAAATCATTAGAAGATGAACTTCTTCAGCTTAGACAGAGGGTTGCTGAACTTGAAAATGAATCTATTTTAAAATCTCAAGAAATAGCTTCTGCTGCTAGTTTGAAGGAAGAGGCTATTGCATCTTCTCTGGCAGATATTAGAGCTCTGAATGAAGAGAACGCTGCAAAAACGTCTAAGATTCAGGAAATGGAAATTCAGATATCTTATTTAAAGGAAGATTTGGAAAGGGAACAGCAAAAGTGGCGTACTGCTCAAGCTAATTATGAAAGACAGGTCATTCTCCAGTCAGAGACAATTCAGGAGTTGACAAAAACATCACAAGCTTTGGCTTCTGTACAAGAGGAGGCAGCCGGGCTTCGTAAATTAGCTGATGCTTGCAAAACAGACAATGAAGAACTAATGGCCAAGTGGGAAGGTGCGAAAGTAGCACTTGAGGATTTCAAGAATAAGGCTGACAAGGCATATGCTGAACTCAATGAACAGAATAAAATTCTGCATGCTCAACTTGAGGCTTTCCACATTCGTTTGGTGGAGAAGGATCAAAAGTTGGCTGGAGTTTCTTCTGAAAGTAATACAACCGAAATGGTTGGGGATGCTGGTATTCAGAGTGTGGTTAGTTACCTCAGACGCACAAAAGAAATTGCTGAAGTAGAGATCTCCTTGCTAAAGAAGGACAAGTTGAGATTGCAGTCACAATTAGAAAGTGCTCTTAAAGCCGTGGAGAGTGCACAGACTTCACTTAATGCTGAGCGTCAAAGCTCAAAAGCATTATTGTTAACCGAGGAGGAAATTAAGTCTTTACAACTTCAGGTTAGGGAGATGAACTTGCTTCGTGAAAGCAATATTCAACTGCGAGAAGAGAATAAGCACAATTTTGAGGAATGCCAGAAATTACGTGAAGAATCTAGAAAGGCTAAAAGTGAAATAGAGAAGCTTGAGGGTATGCTGAAGATGAGACAAATGGAGGTGGAATCCTGTAAAATGGAAATTGAATCGCAGAAAGTGGAGAAGACTCACCTTGAAAGCAGAGTCTCTGAGTTGCTTGAAAGATCTAAGAATATAGATTATGAAGATTATAATCGTGTGAAAGATGATGTTCAAAGAATGCAGATGGAGCTGAATGAGAAAGATACAGAAATTGCAAAAGTCAAAATATTAGTCTCTGAAAGACAGGAATCAATATCTCAATTGGAGCAAGATCTTTCTAATTGCAGATTTGAACTGAAGGAAAGGGAGAAGAAATTGAATGATATTCAACATATGGAGGCCAATCTGAGGGCAGATATGGAGAAACAGAAGAAGTACTTTTCTCAGTTTAAGAGAAAGCTTGAAATTGTCTCAAAGGAGAAGGATGAATTGAGCAAAGAGAATCAAGCTCTTTTGAGGCAGTTGGAAGACATTAGACAAGTGAATGCTGTCGGGAAAAGGTCCACTGGAGATTCAACTGGTGAGCAGGCCATAGAAGAAAAGGACACTAAAATTCAGATTCTTGAGAAACATCTGGAGAGGCTGAGAGAAGAACTAAAGAGAGAGAAGGACGATAGTCGTACTGAGAAAAGCAGGCGGTTGAAAATTGAGAAGGCCATAAAGGATTCTTATACTATAGTTGAGCAGGAAAAATCAAAGATTTTAAATGATTTGGAGAAGCATAAGGGCAACTTGAAGCAGGTTTCTGATGAACTTAGACAATCTAAAAGCAATCTTGAGGATACTTTACCACAGCCTCCTTCAGTGATTGGTTTGGACGAGCTTGCTTCTACCTACATTTTAGCTGCTGAAAATTTTGAGAAGACTGTGCAGTCAGTTTTGACTGATCTTGGAGCTCAAAATGTCCCTTCAGAAGTTTCTCTAGTCACGGATGCTTCGGTACAAACTAGTACAGGTCTTGATGTTCCTCCTCAAACGCCTGATGTTGGATTGCCTTTGGCTCCTGTAACAACTAACTTTCCTGCCAAAGCATTGGAAGAACGTGAAAAGAAAGCTCATGTATCCAAGGCAAAAGTAGAAACACGTAAAGCAGGGCGGAAGTTGGTTCGACCTCGTCTTGGAAAACCAGAGGGAGGACCTCATGGTGATATAGACATGTTAGCATCAGAACTACCGAGCAATGAAAGCAAGCGCGCAACTTCTGGAAAACCAGAAATTGAAGGTGAATCAACTACATCAACCCATCATCTGGCGCGCAAACGAGTGGCTGCATCAACTTCTGAATTGCATGAACATTCAATTATCCATGGGGAGATCAGTTCTGAAATGGCAGCTCCTGTCATGAAGAGGGCTAAAGGGTCTGATACCTTTGCTGATGAAGTTGGTGGTCCATCCTCTTCCTCTCTGGAAAGTCTCAAAACTCAGCCACCCTTTGAAGAAGTTTCTGATATCTGTGAGTTTCCTCAAGGCTCAAATGAGGAAGCAGTTATTGAAAAAGAGGTCGAAATAGTAGGGGAGAAGGCTGCTGATAGGCCAAAAGAACTATCATCCGATGGATCTATGAGTCATGATGAGATAAACATCGACAGAAAAGAAATGCTGGATGAAAATCTGGATAGGCAGATTGGAGCGGAGGTGTCAGATGATGGGTTAAAAGATCAAGCTGAACCAGACAACTGGCATCCAACTTCGGAGATCGGAAGTGAGAGAGAGGAAGGTGAGCTAGCACCTGAAGTTGCAGAACTCGAGGGGGGTAATAATATTGAAAGCATTGAAATAGGGGAGGATCATGCTGAACCAGTTACAACACCTGATGCTTCCCCATCTAGAGTTGAGGATGATGCTCCGGCTGTCACGGCCATGGAGATTGGTGAGATCAACTCTCCTGAGATTCAAAATGAAGAGAAAATTGATGAAGGTGATATGGCTGATGAAACTTCCGAAATTCTAGATAAGTCAACTGATTGTAACCAGATTGATATGGAGAGTGATCAGGCTGTTGAAACTACCACAGTAGCTACTGAGAATACTCCAAGTACACCCCCAGAAATAAATGACTCGAAACAAGGTAGTCCTACTGTTGCTAAAAGGTCGTCTCCTGTCAATAGTAGCACTTCTACTACAATAAATTTGCAAGAGCGAGCCAAGGAAAGAGCTATGCTGAGACAGGCTGGAGTTGTTTCTTCATTGGATAGACGCCCTGTGAGAACATTACGTGGTCGGGGTGGTCGGATCGAGCGTGGTGGCCGTGGTCAACGATCTGGGCGGGGGCCACCTGGTGAATCGAATAGAAGTTGACTGCAATGTTGGATGATTTTATATGAACGATCTAAGGTTTCAATCTGATTTTTTCTATTCCTACACCCGTTTTTCCACCCAATACCATTGAGCATACAACTTAGAAGTTCATGCACTAAAGGTCTTCTACATTGGAGCTAGAACTTAAAGCAGCTTTGTTACTAACTTGTTCTTGTAGTTCACTCTGATTTCTTCGATTTTCTGTTCTGGAGTGTCCATCTAAATGCTTTCGTATTTCTGTTATATGGTGTTGTTATACAAGACAGTCCAGTATCAGAATCGTTGGCCATGTTGGACATTTCGTTCTTATAGATCATTAACAGTGTTATTACAAGTATATCATCAATTAAATACGTTCATATAATTTGATTATTA 6777 41.85 MAYLFISDEEFSRHSDDAAFLAEKADAFIQGLRSELETVRAEADAASITAEQTCSLLDQKFISLSTEFSDLQSQNAQLQTTLELRLSELAEVKSQKHQLNLLSIGKDGEIERLNTELSELHKSKRQLMELIEHKDLEIGEKDSTIKCYLDKIVNLSETAAQREARISEVDMELVRSRAEFARLSQEKELIERHNVWLNDELTAKVGNIIELRRLHSDTEAELSAKLRDVERQLDECSSALKWNKDSVKELEMKLTSAQEELCSSRKMAAENEERLCAEISTVNKLVELYKESSEEWSKKATELEGVIKALETHLSQIESDYKEKLAKEESQRNRLEEEATDLKMKLEKCEAEIELTRKKNELTLFPLSSIAPDALINAKESSDVVGDPRVPVGVSGTALAASLLRDGWSLAKMYAKYQETVDALRHEQMGRKDAEAVLQKVLYELEDKAEVILEERAEHERMIESYSLLNQKLQNSISEQAILEKTLQELKADLKRHERDYLLIQRENIDLSRQITILLKECRDVQLRCGYAGHDVLENLSKTTSLEINVESDADRVISEYLLTFKDINGLVEQNVQLRSLVRKLSVQLQDAELDFKENLEVELKRKTQEAASRVEAVLKKVEEQGQMIESLHASVSMYKRLYEEEHKRNLPRSLSAGGALDFGRKELEFVAEDSQEARKADQEQAAKRIRYLEEELEKSRSEVNFVRAERNKFELELGFAKEKLDSFMKEFEQQRVEMNGVLARNVEFSQLIVDYQRKLREVSESLHNADENSRKLSIEVSVIKSEKELLSNAEKRAQDEIRNLSERLFRVQTSLDTIRSVEEVHEETRVVERRKLEEHAKQLEREWAEAKKELQEERDNVRTLTLDREKTLKNAMSHVEEMGKELANALHATATAEARAAVAEAKLSDLEKKINASDNQVVELDDRSGLKSQPSNQVATDLRRAEAEIQKFKEEAQACKDHMLQYKSIAQVNEEAVKQMECAHETFKIEAEKMKKSLEDELLQLRQRVAELENESILKSQEIASAASLKEEAIASSLADIRALNEENAAKTSKIQEMEIQISYLKEDLEREQQKWRTAQANYERQVILQSETIQELTKTSQALASVQEEAAGLRKLADACKTDNEELMAKWEGAKVALEDFKNKADKAYAELNEQNKILHAQLEAFHIRLVEKDQKLAGVSSESNTTEMVGDAGIQSVVSYLRRTKEIAEVEISLLKKDKLRLQSQLESALKAVESAQTSLNAERQSSKALLLTEEEIKSLQLQVREMNLLRESNIQLREENKHNFEECQKLREESRKAKSEIEKLEGMLKMRQMEVESCKMEIESQKVEKTHLESRVSELLERSKNIDYEDYNRVKDDVQRMQMELNEKDTEIAKVKILVSERQESISQLEQDLSNCRFELKEREKKLNDIQHMEANLRADMEKQKKYFSQFKRKLEIVSKEKDELSKENQALLRQLEDIRQVNAVGKRSTGDSTGEQAIEEKDTKIQILEKHLERLREELKREKDDSRTEKSRRLKIEKAIKDSYTIVEQEKSKILNDLEKHKGNLKQVSDELRQSKSNLEDTLPQPPSVIGLDELASTYILAAENFEKTVQSVLTDLGAQNVPSEVSLVTDASVQTSTGLDVPPQTPDVGLPLAPVTTNFPAKALEEREKKAHVSKAKVETRKAGRKLVRPRLGKPEGGPHGDIDMLASELPSNESKRATSGKPEIEGESTTSTHHLARKRVAASTSELHEHSIIHGEISSEMAAPVMKRAKGSDTFADEVGGPSSSSLESLKTQPPFEEVSDICEFPQGSNEEAVIEKEVEIVGEKAADRPKELSSDGSMSHDEINIDRKEMLDENLDRQIGAEVSDDGLKDQAEPDNWHPTSEIGSEREEGELAPEVAELEGGNNIESIEIGEDHAEPVTTPDASPSRVEDDAPAVTAMEIGEINSPEIQNEEKIDEGDMADETSEILDKSTDCNQIDMESDQAVETTTVATENTPSTPPEINDSKQGSPTVAKRSSPVNSSTSTTINLQERAKERAMLRQAGVVSSLDRRPVRTLRGRGGRIERGGRGQRSGRGPPGESNRS 2070
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 60970062 61063144 - XM_039031771.1 Bhi05g01976 36186

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01976 2070 PANTHER NUCLEOPROTEIN TPR 1 2054 - -
Bhi05g01976 2070 Coils Coil 753 773 - -
Bhi05g01976 2070 Coils Coil 29 49 - -
Bhi05g01976 2070 MobiDBLite consensus disorder prediction 1897 1947 - -
Bhi05g01976 2070 Coils Coil 1483 1517 - -
Bhi05g01976 2070 PANTHER NUCLEOPROTEIN TPR-RELATED 1 2054 - -
Bhi05g01976 2070 Coils Coil 1208 1228 - -
Bhi05g01976 2070 Coils Coil 834 861 - -
Bhi05g01976 2070 Coils Coil 1253 1273 - -
Bhi05g01976 2070 Coils Coil 1140 1164 - -
Bhi05g01976 2070 MobiDBLite consensus disorder prediction 1968 2070 - -
Bhi05g01976 2070 Coils Coil 894 928 - -
Bhi05g01976 2070 Coils Coil 1326 1346 - -
Bhi05g01976 2070 Coils Coil 300 359 - -
Bhi05g01976 2070 MobiDBLite consensus disorder prediction 1765 1780 - -
Bhi05g01976 2070 MobiDBLite consensus disorder prediction 1651 1684 - -
Bhi05g01976 2070 MobiDBLite consensus disorder prediction 2039 2056 - -
Bhi05g01976 2070 Coils Coil 575 595 - -
Bhi05g01976 2070 MobiDBLite consensus disorder prediction 1651 1728 - -
Bhi05g01976 2070 Coils Coil 1390 1410 - -
Bhi05g01976 2070 Coils Coil 784 808 - -
Bhi05g01976 2070 Coils Coil 683 717 - -
Bhi05g01976 2070 Coils Coil 1536 1563 - -
Bhi05g01976 2070 Coils Coil 110 130 - -
Bhi05g01976 2070 Coils Coil 605 625 - -
Bhi05g01976 2070 Coils Coil 1042 1087 - -
Bhi05g01976 2070 MobiDBLite consensus disorder prediction 1705 1728 - -
Bhi05g01976 2070 Coils Coil 219 239 - -
Bhi05g01976 2070 MobiDBLite consensus disorder prediction 1968 2018 - -
Bhi05g01976 2070 MobiDBLite consensus disorder prediction 1809 1881 - -
Bhi05g01976 2070 Coils Coil 989 1023 - -
Bhi05g01976 2070 MobiDBLite consensus disorder prediction 1762 1783 - -
Bhi05g01976 2070 Coils Coil 442 507 - -
Bhi05g01976 2070 Pfam TPR/MLP1/MLP2-like protein 1041 1167 IPR012929 GO:0006606
Bhi05g01976 2070 Coils Coil 1352 1375 - -
Bhi05g01976 2070 Coils Coil 1432 1466 - -
Bhi05g01976 2070 Coils Coil 1277 1311 - -
Bhi05g01976 2070 Coils Coil 936 963 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01976 K09291 TPR, MLP1, MLP2; nucleoprotein TPR - csv:101216510 3494.13
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01976 Bhi-Chr5:60970062 Bhi05g01977 Bhi-Chr5:60970062 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g1185 . . . . . . . . . . . . . . . . . Bhi05g01976 . . Lac12g0024 Hepe02g0006 . . . . . . . . . . . . . . Csa07g01225 . . . . . . Bpe15g00929 . Bma03g00486 . . . . . . . . Cpe15g00913 . . . . . . . . . . . . . . . . . Chy01g00837 Cme01g01492
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004038 1 2 1 1 1 1 1 2 2 3 1 1 1 3 2 1 1 1 1 1 1 1 1 3 3 1 1 2 1 1 43