Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01980 TTCCCTAAGCCGGTGCTTATGCTTTTAGGTTGAGAGAAGAAAGAAAAGATAAAAGAGAAGAAAAGTGGGGCCAGAGTGAATTGGGTAGAAGTATTAATTTGGGGTGGCATTTGTTCTCTTGAATCTGTCCGTATTCCCTTGGGAAATAGCAGCATCTAGAGAGAGAGAGAGACAGAGAGAGAGAGAATGTTCCATCCTAAGAAAGCTTCGACTATGAATTCTCACGAGAGAGGGATGTGCGTACAAGGCGACTCCGGCCTCGTCCTCACCACCGACCCCAAGCCCCGCCTCCGCTGGACTGTCGAGCTTCATGAGCGCTTTGTCGATGCTGTCACTCAGCTCGGAGGCCCTGATAAGGCCACCCCAAAGACCATCATGAGAGTTATGGGTGTAAAGGGTCTCACTCTTTACCACCTCAAGAGCCATCTCCAGAAATTTAGACTGGGAAAGCAGCCTCACAAGGAATTCAATGATCATTCAATTAAGGATGGTATGAGAGGTTTAGAACTTCATCGAAACACGGCTTCTTCATCAAATATGATCAACCGCACCATGAATGAGATGCAAATGGAAGTGCAGAGAAGATTGCATGAGCAACTAGAGGTGCAAAGACACCTGCAGCTGCGAATCGAGGCACAAGGGAAGTATATGCAGAGTATATTAGAAAAGGCTTGTCAAACCCTAGCGGGTGAAAACATGGCAGCTGCCGGCGGCTACAAGGCCATGGGGGGCGGCATCCCAACTAATAATAATAATAATCAGCAAAGCATTGGTGACATGGCCGGAGCCGGAGCCGGAGCCGGAGGGATTAAAGATTTTGGCTCCCCTCTCGGCTTCCCTTCTTTTCAAGACCTGAACCTCTATGGAGGCGACCAGCTTGATCTTCAGCAAAACGTGGATGGGTTCATGGCTCACAACGATAGCTTACTGTGCTTGGGGAAGAAGAAGCCGAGGCCGCAGCCACCTACGTCAAACTATGGTGGCAGCGCGGGAAAAGGTGGGTTGGACTGGGCAGACGATCTCCGGCTGCAAGATATAGGAATGGCGCCGCCGTCCTGCGTGGGGCAGCAAGAAGATGATTTCAAAGGAATTGGTGGGACGCTGGTGGAAAGAGATCATTTGGAGGAAATGTATGAGGCAAAGCCAGCAGTGTCGGATGAAGGCAATGGGGATCACAAGAACTATGACATCAATAATAATAACAATAATAACAATCATAATAATGCGTCTATAAAGCTTCAGAGGCCGTCCCCCCGAAGGTCACCCCTTTCCGTGGATAGGGCCAACCACCCTCTTACCACTGCTCTTCAGTCCACACATTCACCTTTTGGTTAATTTCCATTTATCTCTTTCAGTTTTTAATTTACAGTCGTCAATTAGGTGAGTGACTCCGATTTTTTTTTTTTTCTTTTTTTCTTTTTGAAAGATACTCTTTAATTTTAATTAATTTGGAGTAATTTCAACATCAAGGGGTTGACTTTGCATTTTGATGGACTCTACCCAGCGACCTACCAGACGAGGTACCGACACACAGTGTTTAAAGCCTTCCATGCCATATGCATATGTATATGTGCATGCAAAACCCTTTTGACCAACAATATCCCCTAGTAATTAATTATTTGTTTTTTCTTTTTGGTTGAATCAATCCCTCGTTACTGACATTGTACGAAGGATAGATAGCCTTCAAGTGTCACCAATATCTTACCTTTATAAATTTGATATCAATCAAATTGTCGATGAGTTGTTAATCTAATATGTTAAGTTTGTGATAA 1772 45.09 MFHPKKASTMNSHERGMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDGMRGLELHRNTASSSNMINRTMNEMQMEVQRRLHEQLEVQRHLQLRIEAQGKYMQSILEKACQTLAGENMAAAGGYKAMGGGIPTNNNNNQQSIGDMAGAGAGAGGIKDFGSPLGFPSFQDLNLYGGDQLDLQQNVDGFMAHNDSLLCLGKKKPRPQPPTSNYGGSAGKGGLDWADDLRLQDIGMAPPSCVGQQEDDFKGIGGTLVERDHLEEMYEAKPAVSDEGNGDHKNYDINNNNNNNNHNNASIKLQRPSPRRSPLSVDRANHPLTTALQSTHSPFG 382
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 61216090 61218707 - XM_039032878.1 Bhi05g01980 36190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01980 382 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 29 89 IPR017930 -
Bhi05g01980 382 MobiDBLite consensus disorder prediction 332 355 - -
Bhi05g01980 382 MobiDBLite consensus disorder prediction 319 382 - -
Bhi05g01980 382 MobiDBLite consensus disorder prediction 252 271 - -
Bhi05g01980 382 PANTHER MYB FAMILY TRANSCRIPTION FACTOR APL 1 287 - -
Bhi05g01980 382 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 32 87 IPR006447 GO:0003677
Bhi05g01980 382 Gene3D - 31 89 - -
Bhi05g01980 382 SUPERFAMILY Homeodomain-like 31 87 IPR009057 -
Bhi05g01980 382 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 1 287 IPR044848 GO:0003700
Bhi05g01980 382 Pfam Myb-like DNA-binding domain 35 83 IPR001005 -
Bhi05g01980 382 MobiDBLite consensus disorder prediction 365 382 - -
Bhi05g01980 382 Pfam MYB-CC type transfactor, LHEQLE motif 125 165 IPR025756 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01980 Bhi-Chr5:61216090 Bhi05g01982 Bhi-Chr5:61216090 0 dispersed
Bhi05g01980 Bhi-Chr5:61216090 Bhi05g01981 Bhi-Chr5:61216090 0 tandem
Bhi10g00928 Bhi-Chr10:19061804 Bhi05g01980 Bhi-Chr5:61216090 3.27E-124 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1279 PF00249 Myb_DNA-binding 2.10E-06 CL0123 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01980 - - csv:101217821 661.759