Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01987 AGCTCAATTTTGAGAGGATGGTTTTACTGATTGCCTTGGAGGATATCTAAAGGATATCGGCTCTATACTGGAATTATTCAGGGCTTCTCAAATTACCATTTTTTCAGTGGATTCTGTTTTGGAAAACATCAACACCTGGACAAGCCGTTTCTTGAAATATGGGATATCAAGTACCTCAGTTTTCTTCTGATAGACCATAGAAACGTGAAAGAAGAGCAGCTTAAAAATTTGGTCATCAAGATTTTCTAAGATTAGCTGTGGAAGATTTCAACGTGTGTCACTTCACAGCACAGTTGATGAAACTGGCAACAAAGTACTGACATGGCAAGGACATGTAACTAACATTTGGGTGGATTTAAAAAGATCTATGGGAAATGAAGCCGTTTGGTTGAATAATAAGGCAGTGCTGCCGATGGATAGAGACGTTGATAATTCCAGGTTACATTGACAGGGGGAAATCAGCGAAGGAAAAGTTTTCAAGGAATATCTTTTGAAAGTCAACTCAAGGGGCGCACTACAAAACGCAGTTGCTGGAGTTTAATTCCTTTTTTCTCACCATCATTGATCATCCCCATGGCCTTCCCATTCTTCTTGCATTTACTTTTACCTTAACGCAGTGAAAATGGGTATTCTTCCGTTGGTACAAGTTTTAAAATTTGACCCTTTTTTGGCTCTGCTTTCCCTATCAGACCAATTCTGGATATAGCCACGTAAGGAAAGAAAATCGATGACTGCTGTGGTGTCTATTTTATTTCTTTCCTTTACCGGTTGTGTAGGGAGCACTATTCCCCTGCCACTGCGCAACACTTGTAAATCGATGCCTAAACCTCCAGAAGAATCTCACGGTGGACTGCAACCTACCAAAATGATCCTTCTTCCCCAATTTCTGTGCATGTCCAAAGTATATCAGCCATGAATCTTTCCCGACCCACCAACGTTGGCTGTTTTACTGCCTCCTCCTCAGCTTCTCTATTCCCTGAATTGGATGTGGACACAAAAACTAAAACTGGAGCTTTGCGCTTAGAAGAAACAAAAGAAAGAATCAAAAAATTGTTCGACAAGGTTGAACTTTCAGTTTCTGCATATGATACTGCATGGGTGGCAATGGTTCCTTCTCCAAACTCTCTTAACAAACCTCTTTTTCCTGAGTGCATAAACTGGGTACTAGATAATCAACACCCTGATGGCTCATGGGGCATTCTCCATGACCATCAGTTGCTGATGAAAGCCACTCTCTTATCTACATTAGCATGTGTTCTCACTCTTAAGCGATGGAATATTGGTCAAGATCACATGAGCAAGGCCCTTAGTTTTATCAAATCTAATATAGCTTCAGCTACTGATGAGAAGCAACGTTCTCCTGTGGGATTTGACATAATTTTCCCTGGTATGATTGAGTATGCTAAAGATTTGAATTTGAATCTACCCTTGGCACCGATGAAAGTGGATGCTTTGGTTCAAAAAAAAGAGTTGGAGCTTAGAAGCTGCAGAAGCAACTCTGAAGGAGGAAAAGCCTATTTAGCGTATGTTTCAGAAGGAATTGAAAATTTACAGGATTGGGAAATGGTCATGCAATATCAAAGGAAGAATGGATCACTGTTTAATTCTCCATCCACTACAGCAGTGGCTTTTATGCACAGAAATGATGATGGCTGTTTTAATTACCTTCGCTCAGTCTTACAGAAGTTTGATGATTCAGTTCCTACAATATATCCTCTGGATATATATGCTCGTTTACACATGGTTGATAGCCTGCAAAAATTCGGGATTGGTCGGCATTTCAAAGAGGAGATTAGAAGTGTATTAGATGAAACATACAGATGTTGGATGCAAGGAGAGGAAAATATATTCTTAGATGCTTCAACTTGTGCAATGGCCTTCCGGTTGTTACGTGTTGAAGGATATGATGTTTCTTCAGATAAACTCACTCAATTCTCAGAAGTTCTCTTTCCCAATTGCCTTGGAGGACATTTAAAAGACTTTGGTGCCTCAATGGAGTTATTTAAGGCCTCTCAGATTATCATTTATCCAGATGAATCTATTCTGGAAAATGTGAACTCTTGGACTAGTCGTTTCCTTAATCATGGATTATCTGGTGGTTTGGTTCGTTCTGATAGAACTGATAGACTCGTTAAACAAGAGGCAGTTAATGCTCTTGAGTTCCCCTATAATGCAACTCTGGAACGCTTATTAAATAAGAGAGCACTGGAAAGTTACAGTGGAGACATTGTGAGGATTTCAAAAACAACATATGCCTGCTTAAATTTTGGTCATCAAGATTTCCTGGAACTTGCTGTAGAAGATTTCAATACCCTGCAATGCATACATCGTAAGGAACTGAAAGAGCTTGAAAAATGGGTTGTTGAAAACAAATTGGACAAGTTGAAATTTGCCAGACAGAAGCTAGCGTACTGCTATTTTTCTGCTGCAGCGACCCTTACCTCTCCAGAACTTTGTGATGCCCGCTTATCATGGGCAAAAAATGGTGTGCTCACAACCGTGGTTGATGATTTCTTTGATGTTGGAGGATCTGAAGAGGAATTGCTAAACCTTATACAATTGGTGGAAAAGTGGGATGCTAATGGGGAAACGGGTTACTGTTCCAAGGAAGTTGAGATTATATTTCTTGCACTTCACAGCACAGTTTGTGACATAGGAAGAAGAGCTTTATCATGGCAAGGACGCAGTGTTACGAGGAATGTTATCGATATTTGGTTGGCTTTGCTCGAATCAATGAGGAAGGAAGCTGAATGGTTGAAAAATAAGGTAGTGCCATCAATGGACGAATACATGGAAAATGGCTATGTTTCATTTGCTTTGGGACCTATAGTCCTTCCAACGCTCTACTTTGTTGGACCTAAGCTTCCGGAGGAAGTGATTGGAAATTGTGAATATAAGAAGCTCTTTAAGCTGATGAGCACTTGCGGCCGCCTTCTGAATGATACTCGAACTTTCGATAGAGAGTCCAGTGAAGGGAAACTGAATGCTATGTCTCTATGCATAATTAATGCGGGTGGTAAGTTGACCAAAGAGGAGGCTACTGAAGCAATGAAAGGAGATGTTGAGAGGACGAGAAGAGAACTACTGAGATTAGTTTTGCAGGAGAATACCACAATTCCAAGAGCTTGTAAAGATTTATTCAGGAAAATGAGCTGTGTGGTGCATCTATTTTACAGGAAAGATGATGGGTTTACTTCCCATGAGTTGATGAAGTCTGCAAAAGCCTTATTTGAACAACCCATGGTTCTGGATCAACTTTTGAACAAATGAAAAACTAAAGAAATAAGTTGGTAATTTGTGAACACATGCGGAGGGAGAAATCCTTTTGAAACTTTACTGATGGGAAGTGAATGTAGGCATTGCGTATTCACAAGCTCTTTCTATACTTTGTCTTCATGACACCCTTATACTCCAACTTAGATTGTTAATTAGTTTGCTCGGCTGAGCAACTTTCGTAA 3458 40.02 MNLSRPTNVGCFTASSSASLFPELDVDTKTKTGALRLEETKERIKKLFDKVELSVSAYDTAWVAMVPSPNSLNKPLFPECINWVLDNQHPDGSWGILHDHQLLMKATLLSTLACVLTLKRWNIGQDHMSKALSFIKSNIASATDEKQRSPVGFDIIFPGMIEYAKDLNLNLPLAPMKVDALVQKKELELRSCRSNSEGGKAYLAYVSEGIENLQDWEMVMQYQRKNGSLFNSPSTTAVAFMHRNDDGCFNYLRSVLQKFDDSVPTIYPLDIYARLHMVDSLQKFGIGRHFKEEIRSVLDETYRCWMQGEENIFLDASTCAMAFRLLRVEGYDVSSDKLTQFSEVLFPNCLGGHLKDFGASMELFKASQIIIYPDESILENVNSWTSRFLNHGLSGGLVRSDRTDRLVKQEAVNALEFPYNATLERLLNKRALESYSGDIVRISKTTYACLNFGHQDFLELAVEDFNTLQCIHRKELKELEKWVVENKLDKLKFARQKLAYCYFSAAATLTSPELCDARLSWAKNGVLTTVVDDFFDVGGSEEELLNLIQLVEKWDANGETGYCSKEVEIIFLALHSTVCDIGRRALSWQGRSVTRNVIDIWLALLESMRKEAEWLKNKVVPSMDEYMENGYVSFALGPIVLPTLYFVGPKLPEEVIGNCEYKKLFKLMSTCGRLLNDTRTFDRESSEGKLNAMSLCIINAGGKLTKEEATEAMKGDVERTRRELLRLVLQENTTIPRACKDLFRKMSCVVHLFYRKDDGFTSHELMKSAKALFEQPMVLDQLLNK 785
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 61265410 61273040 + XM_039032146.1 Bhi05g01987 36197

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01987 785 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 57 241 IPR008930 -
Bhi05g01987 785 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 225 437 IPR008930 -
Bhi05g01987 785 CDD Terpene_cyclase_plant_C1 253 775 IPR044814 GO:0010333|GO:0016102
Bhi05g01987 785 Gene3D Farnesyl Diphosphate Synthase 468 783 IPR008949 -
Bhi05g01987 785 Gene3D - 54 256 - -
Bhi05g01987 785 Pfam Terpene synthase, N-terminal domain 215 399 IPR001906 GO:0010333|GO:0016829
Bhi05g01987 785 PANTHER ENT-KAUR-16-ENE SYNTHASE, CHLOROPLASTIC 47 775 - -
Bhi05g01987 785 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 47 775 - -
Bhi05g01987 785 Gene3D - 47 465 IPR036965 GO:0010333|GO:0016829
Bhi05g01987 785 SFLD Terpene Cyclase Like 1 N-term 20 448 - -
Bhi05g01987 785 Pfam Terpene synthase family, metal binding domain 458 722 IPR005630 GO:0000287|GO:0010333|GO:0016829
Bhi05g01987 785 SUPERFAMILY Terpenoid synthases 455 776 IPR008949 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01987 K04121 E4.2.3.19; ent-kaurene synthase [EC:4.2.3.19] - csv:101217426 1425.99
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01983 Bhi-Chr5:61251761 Bhi05g01987 Bhi-Chr5:61265410 2.02E-42 dispersed
Bhi05g01985 Bhi-Chr5:61265409 Bhi05g01987 Bhi-Chr5:61265410 0 dispersed
Bhi05g01987 Bhi-Chr5:61265410 Bhi10g02356 Bhi-Chr10:61782555 6.46E-42 dispersed
Bhi05g01986 Bhi-Chr5:61265409 Bhi05g01987 Bhi-Chr5:61265410 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g1165 Blo04g00457 . . . . . Bma08g00824 . . . . . . . . . . Bhi05g01987 . . . . . . . . . . . . . . . . . . Csa07g01217 . . . . . . Bpe15g00924 . Bma03g00490 . . . . . . . . Cpe15g00909 . . . . . . . . . . . . . . . . . Chy01g00846 Cme01g01495
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003981 2 5 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 3 1 1 1 2 1 2 2 1 1 1 2 1 44