Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01995 TTTGAAAGTGTTGTAGGACAAGTTAGAAAGGTGGAACTGGGAAGTGAGCGAGTTTTTCATTTTTTTCGCATAGAGAGGATTCCATAAGAAGTTCCGCTCAATTGGCCATTTCCTTCATTCTTATTCTTCTTTGCTTTTTCCGACTCCCAAAAGACAGTCACAGATCCTTTTTATTTTTCCTCCTTTTTTATTCTGCGTTTGGCCGTTCTACGCCTTTTCTCCTATTTCCCTTCCATCAGCTCAATGGCCGCATCTTCGCTCTTCAGATCTGCACCCGCCGCTTCTTTTGTTCAACCATCGCGTTCCTTCTCTTCTGCCGATCAGTCTACGGCTTCGTGCGTTAATTTGAATTCTACCAAGTTTCAATCGAGCATTTTTGGTGCCCATGTTTCAAGCGGATCATCTTCCTTGCAGCTTCGCAGAACCCAGAATATTCAGCCTATTCAAGCTACAGCCACTGAACTGCCTCCCACAGTTCAAAAATCAAGGAGCAGCGGAAAGACGAAGGTCGGAATCAATGGTTTTGGACGTATTGGAAGGTTGGTATTGCGGATTGCAAGCTCGAGGGATGATATTGATGTAGTTGCAGTTAATGACCCTTTTGTTGATGCAAAGTACATGGCATACATGTTCAAGTTTGATTCTACACACGGTAATTTTAAGGGCACGATTAACATTGTGGATGATTCAACATTGGAAATCAATGGGAAACAAATAAAGGTTTTGAGTAAAAGGGATCCAGCAGAAATTCCTTGGGGCGAGTTTGGGGCCGAGTTTGTTGTTGAATCATCTGGGGTCTTCACAACGACAAATAAGGCATCGGCACACTTGAAGGGTGGAGCCAAGAAAGTAGTCATATCAGCCCCATCAGCTGATGCACCCATGTTCGTTGTTGGAGTTAATGAGAAGACATATAAGCCAAGCATGGATATTGTTTCAAATGCAAGTTGTACCACAAATTGTCTTGCTCCTCTTGCGAAGGTGGTTCATGAGGTTTTTGGTATTGCTGAAGGTTTGATGACAACCGTGCATGCGACTACAGCTACTCAAAAAACTGTTGATGGGCCCTCAATGAAGGATTGGCGTGGGGGTCGTGGTGCTGCACAAAATATCATCCCAAGTTCTACCGGTGCTGCAAAGGCTGTGGGAAAAGTTCTTCCTGAGCTCAATGGAAAACTTACAGGGATGGCATTTCGTGTTCCAACACCTAATGTATCTGTTGTGGACTTGACTTGTAGACTAGAGAAGAGCGCTTCTTATGAAGATGTCAAAGCTGCAATCAAATATGCCTCAGAAGGCCCACTCATGGGTATCCTCGGTTACACGGATGAGGATGTTGTCTCCAATGATTTTGTTGGTGACTCAAGGTCAAGTATATTCGATGCGAAGGCCGGAATAGGTCTCAGCGACTCCTTCATGAAGCTTGTCTCCTGGTATGACAACGAGTGGGGATACAGCAACCGAGTACTGGACCTTATAGAGCACATTGCATTGGTGGCAGCCAACAAGTGAAGACTATTACGAGAGATTTAGACTTCTGCCATGTTTAACAAGAATTTTGTGGAAGATCACAAATTGTCGAGTCTTTTGGTCCCTCTCTTTTCTACACCATCTTCAACAACGTAAACGTTGCATTCAAGTTTGAAAATAATGATGAAAAACATATTTCAGATTAACGTAATAAAACAAATCACCTTGCATTTTCCTTTCCAATTCCTTAGATTTTTAAATACACAATATGAAAAACATATTCAAGTTTTGTTTCTCAA 1769 42.57 MAASSLFRSAPAASFVQPSRSFSSADQSTASCVNLNSTKFQSSIFGAHVSSGSSSLQLRRTQNIQPIQATATELPPTVQKSRSSGKTKVGINGFGRIGRLVLRIASSRDDIDVVAVNDPFVDAKYMAYMFKFDSTHGNFKGTINIVDDSTLEINGKQIKVLSKRDPAEIPWGEFGAEFVVESSGVFTTTNKASAHLKGGAKKVVISAPSADAPMFVVGVNEKTYKPSMDIVSNASCTTNCLAPLAKVVHEVFGIAEGLMTTVHATTATQKTVDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTCRLEKSASYEDVKAAIKYASEGPLMGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSDSFMKLVSWYDNEWGYSNRVLDLIEHIALVAANK 422
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 61479378 61483973 - XM_039031080.1 Bhi05g01995 36205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01995 422 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 86 252 IPR036291 -
Bhi05g01995 422 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 235 398 - -
Bhi05g01995 422 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 195 208 IPR020831 GO:0016620
Bhi05g01995 422 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 230 248 IPR020831 GO:0016620
Bhi05g01995 422 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 257 273 IPR020831 GO:0016620
Bhi05g01995 422 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 314 331 IPR020831 GO:0016620
Bhi05g01995 422 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 354 369 IPR020831 GO:0016620
Bhi05g01995 422 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 241 398 IPR020829 GO:0016620
Bhi05g01995 422 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 1 421 IPR020831 GO:0016620
Bhi05g01995 422 Gene3D Dihydrodipicolinate Reductase; domain 2 236 402 - -
Bhi05g01995 422 Pfam Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 88 188 IPR020828 GO:0051287
Bhi05g01995 422 ProSitePatterns Glyceraldehyde 3-phosphate dehydrogenase active site. 234 241 IPR020830 GO:0016620
Bhi05g01995 422 Gene3D - 88 415 - -
Bhi05g01995 422 TIGRFAM GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 88 410 IPR006424 GO:0006006|GO:0016620|GO:0050661|GO:0051287
Bhi05g01995 422 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPCP1, CHLOROPLASTIC 1 421 - -
Bhi05g01995 422 SMART gp_dh_n_7 87 236 IPR020828 GO:0051287
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi05g01995 Bhi10g00938 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01995 Bhi-Chr5:61479378 Bhi08g01717 Bhi-Chr8:48162714 0 dispersed
Bhi09g02843 Bhi-Chr9:75358129 Bhi05g01995 Bhi-Chr5:61479378 2.77E-112 transposed
Bhi04g02394 Bhi-Chr4:65505700 Bhi05g01995 Bhi-Chr5:61479378 0 transposed
Bhi10g00938 Bhi-Chr10:19193420 Bhi05g01995 Bhi-Chr5:61479378 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01995 K00134 - csv:101215988 781.171