Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g01998 AACTCCAACAAATAGGTCTAAACCCCAACCCGCACACACCGCCGCTGATCTCCGCTACTCACCACGTGTCCGCTTCCCTTATTTTCCATTTTCCATCTATAAATTCCTCATCCTCCCTTCCCCATTTTCTTCGTATTTGTTTCACCTCACTCTCCAGTCTCCACCGCTTCCCTAATTTCTCGTCTTTCTTCTTCCTCGCGATTCTTATGGCAACCAAAAGGAGCGTCGGTACTCTCAAGGAGGCTGATTTGAAGGGAAAGAGGGTGTTTGTGAGAGTCGATCTCAACGTTCCTTTGGATGATAATTTCAACATCACTGATGACACCAGAATCCGTGCCGCTGTGCCTACCATTCAGTATTTGCTTAGCCATGGTGCTAGGGTCATCCTCTCCAGCCATTTGGGACGTCCAAAGGGTGTAACACCAAAATACAGTTTGAAGCCTCTTGTTCCCAGGCTTTCTGAGCTCCTTGGACTTCAGGTGATAATGGCTAATGATTGTATTGGCGAGGAAGTTGAGAAGTTGGTTGCTGAATTGCCCGAGGGAGGTGTATTGCTGCTTGAAAACGTGAGGTTCTACAAGGAGGAAGAGAAGAATGACCCTGAGTTTGCCAAGAAGTTGGCTTCTCTGGCGGATCTCTATGTTAACGATGCCTTTGGAACTGCTCACAGAGCCCACGCTTCCACAGAGGGTGTGGCTAAGTACTTGAAACCTTCTGTTGCTGGTTTCCTTATGCAGAAGGAACTTGACTACTTGGTCGGAGCTGTCTCTAATCCCAAGAGACCATTTGCTGCCATTGTTGGTGGTTCAAAGGTGTCGTCAAAGATTGGAGTGATTGAATCTTTGTTGGAAAAGGTTAACCTTCTCTTCCTGGGTGGAGGAATGATCTTTACCTTCTACAAGGCACAAGGTCTTGCAGTGGGTAAATCACTTGTGGAAGAAGACAAGCTTGACCTTGCCACCTCACTGATTGAGAAGGCAAAAGCCAAGGGAGTTTCTCTTTTGCTTCCAACTGATGTAGTGGTAGCAGATAAATTTGCTGCTGATGCTGATAGCAAGGTTGTAGCAGCATCGAGTATTCCAGATGGCTGGATGGGGTTGGATATTGGACCTGATTCTATCAAGAGTTTTGGTGAAGCTTTGGATTCTACCCAAACCATTATTTGGAATGGACCTATGGGAGTGTTCGAGTTTGACAAGTTTGCGGCTGGAACAGAGGCTATTGCGAAGAAGTTGGCAGAGCTGAGTGGGAAGGGAGTTACCACCATAATTGGAGGGGGCGACTCTGTTGCGGCTGTTGAGAAGGTTGGGCTTGCGGATAAGATGAGTCACATCTCCACTGGTGGTGGTGCCAGCTTAGAGCTTCTTGAAGGAAAAACACTTCCTGGCGTCCTTGCTCTCGACGATGCCTAAGTTCAATTCCCTCGCCGTTTTTCATTGTGTTATATCGTTAAGGTTGTTTTTCAACCCTTTTGAGGATTTCTTGAGTTTGTTTTTTTTCCTTTGAGAAGAGGTTGTAGTTATAGGATAGATTATTATTCGAATAAGTTCTCAAATTCTCCTCTGAACGTATATGGTCCACGTTATTGGATTGGATCATTTTTTTTCATCGATTTGAAATGTTGAGTAATGCTAGTGCCTGATGGATTCAGGCTGTTTAACCATTAATCAATCGCCTTCTGTTTA 1685 45.4 MATKRSVGTLKEADLKGKRVFVRVDLNVPLDDNFNITDDTRIRAAVPTIQYLLSHGARVILSSHLGRPKGVTPKYSLKPLVPRLSELLGLQVIMANDCIGEEVEKLVAELPEGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVAKYLKPSVAGFLMQKELDYLVGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKVNLLFLGGGMIFTFYKAQGLAVGKSLVEEDKLDLATSLIEKAKAKGVSLLLPTDVVVADKFAADADSKVVAASSIPDGWMGLDIGPDSIKSFGEALDSTQTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 401
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 61521614 61524661 - XM_039032533.1 Bhi05g01998 36208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g01998 401 PANTHER PHOSPHOGLYCERATE KINASE, CYTOSOLIC 1 401 - -
Bhi05g01998 401 ProSitePatterns Phosphoglycerate kinase signature. 19 29 IPR015911 GO:0004618|GO:0006096
Bhi05g01998 401 PANTHER PHOSPHOGLYCERATE KINASE 1 401 IPR001576 GO:0004618|GO:0006096
Bhi05g01998 401 PRINTS Phosphoglycerate kinase family signature 14 30 IPR001576 GO:0004618|GO:0006096
Bhi05g01998 401 PRINTS Phosphoglycerate kinase family signature 36 58 IPR001576 GO:0004618|GO:0006096
Bhi05g01998 401 PRINTS Phosphoglycerate kinase family signature 113 128 IPR001576 GO:0004618|GO:0006096
Bhi05g01998 401 PRINTS Phosphoglycerate kinase family signature 141 163 IPR001576 GO:0004618|GO:0006096
Bhi05g01998 401 PRINTS Phosphoglycerate kinase family signature 172 194 IPR001576 GO:0004618|GO:0006096
Bhi05g01998 401 PRINTS Phosphoglycerate kinase family signature 195 214 IPR001576 GO:0004618|GO:0006096
Bhi05g01998 401 PRINTS Phosphoglycerate kinase family signature 317 342 IPR001576 GO:0004618|GO:0006096
Bhi05g01998 401 PRINTS Phosphoglycerate kinase family signature 353 364 IPR001576 GO:0004618|GO:0006096
Bhi05g01998 401 PRINTS Phosphoglycerate kinase family signature 376 393 IPR001576 GO:0004618|GO:0006096
Bhi05g01998 401 Hamap Phosphoglycerate kinase [pgk]. 9 400 IPR001576 GO:0004618|GO:0006096
Bhi05g01998 401 CDD Phosphoglycerate_kinase 10 400 IPR001576 GO:0004618|GO:0006096
Bhi05g01998 401 Gene3D - 8 184 IPR015824 GO:0004618|GO:0006096
Bhi05g01998 401 SUPERFAMILY Phosphoglycerate kinase 8 400 IPR036043 GO:0004618|GO:0006096
Bhi05g01998 401 Pfam Phosphoglycerate kinase 11 390 IPR001576 GO:0004618|GO:0006096
Bhi05g01998 401 Gene3D - 187 400 IPR015824 GO:0004618|GO:0006096
Bhi05g01998 401 PIRSF Pgk 2 401 IPR001576 GO:0004618|GO:0006096
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g01998 Bhi-Chr5:61521614 Bhi10g00939 Bhi-Chr10:19213454 0 dispersed
Bhi05g01997 Bhi-Chr5:61514068 Bhi05g01998 Bhi-Chr5:61521614 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g01998 K00927 - csv:101215513 743.421