Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g02021 AAAGGGACCCTGCTGCAGCCGTGAGACCCGTCAGTCCTCCCTCGCTCTCATCCGTCTCTCTCACCCACACTCGCCCCCGCGCCGTTCCGTCACCGCCGTCGTCCGCATGTGTTGTTGCCGTCAATTGGAGTTTTAGAGGCTTTCGAGGTGCTGTCCGACGAGATTAAGGTTCGACATTCTTTTTGGTTGGAAACTTATCTGAAGTTTTGGAGGTAGGTTTGGGTCAAACTACATTTGGCTGCATGTAATTGCCTCAAAGCACACTTAGCAATTTGCGGAGAAAGGAAGACAGAAAGCGGAAGCCATGTCCGTTCTGATTGTAACCAGTCTGGGGGACATTGTAATCGACCTGCACACTGACATGTGCCCCTTGACCTCCAAGAATTTCTTGAAGCTCTGCAAAATTAAGTACTACAATGGGTGTCTGTTTCATACAATACAGAAGGACTTTACTGCTCAGACTGGTGACCCCACTGGCACTGGGACTGGTGGCGACTCAATCTATAAATTTCTATATGGGGACCAGGCTCGATTTTTCAGTGATGAGATTCGTCTCGATTTGAAGCATTCTAAGACTGGCACAGTTGCTATGGCCAGTGCTGGAGAAAATCTTAATGCTTCTCAGTTTTATTTTACTTTGCGTGATGATCTCGAGTACCTTGATGGCAAGCACACTGTTTTTGGAGAGGTTGCTGAAGGACTTGACACCTTGATTAGGATTAATGAAGCCTATGCAGATGAGAAGGGCAGACCATACAAAAACATCCGAATCAAGCATACTTATATACTGGATGATCCATTTGATGATCCACCGCAGTTAGCTGAGCTGATTCCAGGTTCTTCTCCTGAAGGGAAACCAAAAGATGAGGTTGTTGATGAGGTGCGATTGGAAGATGATTGGGTGCCACTGGATGAACAATTAGGTCCAGAAGAACTTGAAGAGGTTTTTCGTGCAAAGGAAGCTCACTCCAGAGCTGTTGTGCTTGAAACTATTGGAGATATTCCTGATGCTGAGATAAAGCCTCCTGATAATGTGCTATTTGTTTGTAAATTGAATCCAGTTACAGAAGATGAGGACTTGCATACTATCTTCTCCCGTTTTGGCACTGTATTATCGGCTGAAGTTATCCGTGATTATAAGACTGGAGATAGTTTATGCTATGCCTTCATAGAGTTCGAGACAAAAGAGGCATGTGAACAAGCATATTTTAAGATGGACAATGCTCTGATTGATGATAGAAGGATACATGTGGATTTCAGTCAAAGTGTTGCAAAACTCTGGTCCCAATACCGGCGCAAAGATTACTCGGCAGATAAAGGTAGAGGTTGCTTTAAATGTGGTGCTTCCGACCATATGGCTAAGGATTGCACTGGTGGATCTACAAGGTTCATCTTGAAGGATGATAATGTACAACATGGTGGAGATGAATCAAGGTATGACTTTGTTTTTGATGAGGAAAATGGAATTAACCATAGGAAAGAAAAGAGATATCGAGATCATGATAGAGATAAGCATTTTGAGAGGCCAAACGCTAGGAAGCAAAGCTCCACTGGGCATGAGCGATACACAGAAAAGAAGAGTTCAAGTGATAGGCATGAAACAAATGATCGAAATAGATTCAGGGAAAGAGAGATGCATCGAGAATATAAAGACGGGCAATCTAGTGGACACAGAGGAGACAAGGATGACTTTGATGAACGAAGGGACCATGAACAAAGGAAGAGACAGAGTGACCGGGATGATCATAGGGAGTTGAATTATAAAAAAAGATCTTCAAATGATAATGACGCTTATGACAAGAAGGATTATGAAGCTAATAGAAACAGAAGTGGAAGAGAATATAGTGACAAGTCAGAGAGGAGGAAGGATGATGAGTTTTATGGCAGAAGGCATGCAGATAAGAGTAGCCATGAAGAGAAAAGGTACATGGGAAATGGCAGAAGAAAAATTACAGATGATAGTCGGGAATATAGGAAGGATGAAAGAGTTTGTGGAAAAAGAAATTTCGACAGTGACAAAGCAGAGATGAAAGACGAGCTACATTATAAGAAAAAATATACAGATGGTTACAAGGACAGGAGAGACGAGCGAGAACCCAGAAAACGAAGCAAGGACGATTACAAGGAAAGATAAAGAATGAGTTTGTTAAATTGAAAGAACTGCAGATGACAGTTAAACTCTCTCCAGTAGATAGAATGTCACAAGGGCCGAAGCACTTCATGGTTGTCTTCTATGGTAAAATGCCTCTTGAAAATTCAAAAAGAAACAAAAGAAAAAAGGGCTGTGGACACAATTTACTGCGTTTCAACCCTTGTAAGTAGGCTCCTTTTTCCAAAGCCTTATTCTGTAATGATATCACCACTTGTAACTTAACGTAAGTTCGCATCTTCCCCTTTTTCAATTCATTCTTCAGTAATGATATATGACGGTTCCTTTTTGTATGATCTTGTAGATTCATTGGAAGTTTGAACCAAACAATGCAATGATCAAAGACAAATTTGATATA 2507 41.72 MSVLIVTSLGDIVIDLHTDMCPLTSKNFLKLCKIKYYNGCLFHTIQKDFTAQTGDPTGTGTGGDSIYKFLYGDQARFFSDEIRLDLKHSKTGTVAMASAGENLNASQFYFTLRDDLEYLDGKHTVFGEVAEGLDTLIRINEAYADEKGRPYKNIRIKHTYILDDPFDDPPQLAELIPGSSPEGKPKDEVVDEVRLEDDWVPLDEQLGPEELEEVFRAKEAHSRAVVLETIGDIPDAEIKPPDNVLFVCKLNPVTEDEDLHTIFSRFGTVLSAEVIRDYKTGDSLCYAFIEFETKEACEQAYFKMDNALIDDRRIHVDFSQSVAKLWSQYRRKDYSADKGRGCFKCGASDHMAKDCTGGSTRFILKDDNVQHGGDESRYDFVFDEENGINHRKEKRYRDHDRDKHFERPNARKQSSTGHERYTEKKSSSDRHETNDRNRFREREMHREYKDGQSSGHRGDKDDFDERRDHEQRKRQSDRDDHRELNYKKRSSNDNDAYDKKDYEANRNRSGREYSDKSERRKDDEFYGRRHADKSSHEEKRYMGNGRRKITDDSREYRKDERVCGKRNFDSDKAEMKDELHYKKKYTDGYKDRRDEREPRKRSKDDYKER 609
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 62020132 62030862 - XM_039031858.1 Bhi05g02021 36231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g02021 609 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 7 161 IPR002130 GO:0000413|GO:0003755
Bhi05g02021 609 SMART c2hcfinal6 341 357 IPR001878 GO:0003676|GO:0008270
Bhi05g02021 609 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 245 315 IPR000504 GO:0003723
Bhi05g02021 609 Gene3D - 235 347 IPR012677 -
Bhi05g02021 609 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 243 321 IPR000504 GO:0003723
Bhi05g02021 609 CDD cyclophilin_RRM 4 169 IPR035538 -
Bhi05g02021 609 Gene3D - 1 172 IPR029000 -
Bhi05g02021 609 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 4 159 IPR002130 GO:0000413|GO:0003755
Bhi05g02021 609 Pfam Zinc knuckle 340 356 IPR001878 GO:0003676|GO:0008270
Bhi05g02021 609 MobiDBLite consensus disorder prediction 391 609 - -
Bhi05g02021 609 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 4 1 494 IPR035542 -
Bhi05g02021 609 SUPERFAMILY Cyclophilin-like 1 176 IPR029000 -
Bhi05g02021 609 CDD RRM_PPIL4 240 322 - -
Bhi05g02021 609 SUPERFAMILY RNA-binding domain, RBD 229 331 IPR035979 GO:0003676
Bhi05g02021 609 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 16 31 IPR002130 GO:0000413|GO:0003755
Bhi05g02021 609 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 42 54 IPR002130 GO:0000413|GO:0003755
Bhi05g02021 609 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 92 107 IPR002130 GO:0000413|GO:0003755
Bhi05g02021 609 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 121 136 IPR002130 GO:0000413|GO:0003755
Bhi05g02021 609 ProSiteProfiles Zinc finger CCHC-type profile. 342 355 IPR001878 GO:0003676|GO:0008270
Bhi05g02021 609 SMART rrm1_1 244 317 IPR000504 GO:0003723
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g02019 Bhi-Chr5:62020132 Bhi05g02021 Bhi-Chr5:62020132 0 dispersed
Bhi05g02021 Bhi-Chr5:62020132 Bhi05g02023 Bhi-Chr5:62020132 0 dispersed
Bhi05g02020 Bhi-Chr5:62020132 Bhi05g02021 Bhi-Chr5:62020132 0 tandem
Bhi05g02021 Bhi-Chr5:62020132 Bhi05g02022 Bhi-Chr5:62020132 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g02021 K12735 - csv:101212221 1059.28