Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g02025 CCTCAAGTTCCCAAACCCTACTTTTTTATTCTTCCTCCTCTAGTCAATTCTTAAATTGCCTTTTTAATCTCCCCTCCATTTAATCAAAATTCTCTTCTTCTGATTCTTCTTCTTCTGATTCTTCTTCTTCATCTGGGTTCACAATATATTATTATATAGTTAATTAGAAATATCTCAATTTTGGAGATATATGAATTATATTATATAGAGATCAGAGGGTTTAATTTTGGGTATTCTATATGTAAATTAAATGGCATCGTCGGAGATGATGATGATGATGAATGGGAGCTGCAAAAAGGGAAGTGGGGCAGCGCCGTGCGCTGCGTGCAAGCTTCTCCGGCGGCGGTGTGCTCAGGACTGCGTTTTTGCTCCTTATTTCCCTGCCGATCAACCCCACAAATTCTCCAGTGTTCACAAGGTCTTTGGAGCTAGTAATGTCAGCAAATTGTTACAGGAATTGCCAGAACATCAGCGGAGCGACGCCGTGAGTTCGATGGTATACGAGGCAAACGCGAGAATTCGAGATCCGGTATATGGGTGCGTGGGAACGATATCGTGTCTACAACGACAAGTAGATGCACTACAACAGCAACTAGCAATGACACAGGCCCAGTTGGTTCAATTGAAAATGGGCCAATTTACATCAACATCACAATCATCATCTAGTACAGATGACCTCCTTCCTTCTCCGCCCAATATCAATATGGGCGCATCCCCATCCTTGTGGTCTTGCTAGCTTTCTCTTGTTTTGGCCCATTTTTCATTATGACTCTTACTTTTTCTTATAACTATTTTAGGAAAAAAAAAATATATCTTTTTATCCCTAAATTTTATATTTTTAACAACATACTTGAGGATAGAGGGATCAATAGGTGCACTCAGACATCTCAATTAGGTTGACACATCTTTAACACCCCTCATCAATATCCCTAAATTTTATAAATATAGTTTCATTTAGTTACTAAGCTTCAAAATGACACTCTTTTAACTTTGGTC 996 38.96 MASSEMMMMMNGSCKKGSGAAPCAACKLLRRRCAQDCVFAPYFPADQPHKFSSVHKVFGASNVSKLLQELPEHQRSDAVSSMVYEANARIRDPVYGCVGTISCLQRQVDALQQQLAMTQAQLVQLKMGQFTSTSQSSSSTDDLLPSPPNINMGASPSLWSC 161
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 62169715 62172180 - XM_039032455.1 Bhi05g02025 36235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g02025 161 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 12 139 - -
Bhi05g02025 161 Coils Coil 101 128 - -
Bhi05g02025 161 Pfam Lateral organ boundaries (LOB) domain 22 119 IPR004883 -
Bhi05g02025 161 ProSiteProfiles LOB domain profile. 21 122 IPR004883 -
Bhi05g02025 161 MobiDBLite consensus disorder prediction 132 161 - -
Bhi05g02025 161 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 12 139 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi05g02025 Bhi10g00963 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g02025 Bhi-Chr5:62169715 Bhi08g00916 Bhi-Chr8:30291794 1.93E-66 dispersed
Bhi01g00269 Bhi-Chr1:5111848 Bhi05g02025 Bhi-Chr5:62169715 2.64E-36 transposed
Bhi01g01363 Bhi-Chr1:27429231 Bhi05g02025 Bhi-Chr5:62169715 1.01E-30 transposed
Bhi09g01233 Bhi-Chr9:29497615 Bhi05g02025 Bhi-Chr5:62169715 1.78E-32 transposed
Bhi11g02885 Bhi-Chr11:77595502 Bhi05g02025 Bhi-Chr5:62169715 4.72E-40 transposed
Bhi12g02627 Bhi-Chr12:81164454 Bhi05g02025 Bhi-Chr5:62169715 2.26E-37 transposed
Bhi10g00963 Bhi-Chr10:19755429 Bhi05g02025 Bhi-Chr5:62169715 6.85E-67 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1284 PF03195 LOB 1.80E-43 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g02025 - - csv:101213100 260.381