Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi05g02092 ATAATTATAATAATAAACCAAAGCAAGAAAACGCGAATCTCGCAGAGCAGGAGACGAAGAAAGAGGAATCGGAAAGCCGTTAGAGCAAAGAAGAAATGGAGCTCCGGCACCGGCGGTAACAATTCTTCCATAGGAGGTGGTAGCTTAAACAATCAACAACCTCCAAAAACTCCCTTGCATTTTGTCTACCATCTCCGAAAAACTTCTAAAATCCTTTTGATTTATTTTCCCTTTTACCTAAACACTCCGTATTCTTCTTATTATTCATCCATGCGGCGAGGTAGAGCCACGGATCCATTGACGGCCGCAGAAACAGTCCGAGAACCTGTTAAAGAAGTCCGATTCAGAGGCGTTCGGAAGCGTCCATGGGGCCGATACGCCGCCGAGATTAGAGATCCTTGGAAGAAAACTCGAGTTTGGCTCGGCACCTTCGATACGGCGGAGGATGCTGCCAGAGCATACGACGAGGCCGCTCTCTCTCTCCGGGGACCGAAGGCGAAAACGAACTTCCCGTTGCATCCATCTACTATCTCTGTTCATCAGCAAATTCCATTCTCGCAGGAGTTTCATGATTCCGGTGGATTTTGCAAGATTAGTAACATTCCAGTCAATAGACCTACATCGAGTAGTCTGAGCTCCACCGTGGAGTCTTTTAGCGGTCCGCGGGTTTCGATTCCGGTTCCATCGGTTCCAAAACTCCGCCGGAAGTCCCTGCCGCAGGTCTCGCCCGACGATTGCCATAGCGACTGTGATTCGTCGTCCTCGGTTGTTGATGACAGTGAGGAATATGCTCACACGTCGTCAATTCGCAGAGTGCTGCCGTTCGATCTGAATCTACCTCCTCCACTGCCACCGCCGCATGACGTCGATTTATCCGGTGATGATCTTCATGCCACTGCTCTGTATTTTTGACATCATTCTGCTTCCCAATCACAAATACCAAACGGTTCATTCTTCTCTTCATTATCTATTTAATTTTCCTATCGATCGAGCAGAACTTAAATGGTAATTTTGTCTCTCAACCTGCTTGTTGAGCGAGAAAAATTTGCTTCTCCACTCCTTAATTTCTTAGTTCATGGTGTAGATTAGCATAGCACAAGGTCTCTGAATCTTTGTTTGTCTCTGTGTTGTTAAAGAAAAGGAAAGAAATCCATGGATGTTGCTAGGCGGTTCTACATCTTGATCTGATTATCTCGTTAACTAAATGAAATAACTTATCTCTTAAATCTCTTCAATCCAATCATATTCTGAAATGCATTTTCACTTCAACCTGTTCAATCAATTCATAGGAAA 1293 44.93 MRRGRATDPLTAAETVREPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDAARAYDEAALSLRGPKAKTNFPLHPSTISVHQQIPFSQEFHDSGGFCKISNIPVNRPTSSSLSSTVESFSGPRVSIPVPSVPKLRRKSLPQVSPDDCHSDCDSSSSVVDDSEEYAHTSSIRRVLPFDLNLPPPLPPPHDVDLSGDDLHATALYF 213
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 63822404 63823696 - XM_039032596.1 Bhi05g02092 36302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi05g02092 213 CDD AP2 24 81 IPR001471 GO:0003700|GO:0006355
Bhi05g02092 213 Gene3D AP2/ERF domain 23 83 IPR036955 GO:0003700|GO:0006355
Bhi05g02092 213 SUPERFAMILY DNA-binding domain 25 82 IPR016177 GO:0003677
Bhi05g02092 213 PRINTS Ethylene responsive element binding protein signature 25 36 IPR001471 GO:0003700|GO:0006355
Bhi05g02092 213 PRINTS Ethylene responsive element binding protein signature 47 63 IPR001471 GO:0003700|GO:0006355
Bhi05g02092 213 Pfam AP2 domain 24 73 IPR001471 GO:0003700|GO:0006355
Bhi05g02092 213 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 14 186 - -
Bhi05g02092 213 SMART rav1_2 24 87 IPR001471 GO:0003700|GO:0006355
Bhi05g02092 213 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3 14 186 - -
Bhi05g02092 213 MobiDBLite consensus disorder prediction 139 172 - -
Bhi05g02092 213 ProSiteProfiles AP2/ERF domain profile. 24 81 IPR001471 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi05g02092 Bhi10g01055 CCT
Bhi05g02092 Bhi10g01055 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi05g02092 Bhi-Chr5:63822404 Bhi11g00585 Bhi-Chr11:13309705 3.33E-40 dispersed
Bhi12g00609 Bhi-Chr12:18839553 Bhi05g02092 Bhi-Chr5:63822404 1.51E-23 dispersed
Bhi06g00369 Bhi-Chr6:7992760 Bhi05g02092 Bhi-Chr5:63822404 3.38E-20 transposed
Bhi10g01055 Bhi-Chr10:21193586 Bhi05g02092 Bhi-Chr5:63822404 5.09E-70 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1287 PF00847 AP2 6.10E-15 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi05g02092 K09286 - csv:101210265 347.821