Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g00024 AAAAGCACCTACCTCGAAACCTCACTCAATTATTCCTTCATACATATATTTCCAACTCTCTATTTAACTCAACACTTCACAACTTCCCATCACACTCTCAAAACCCCTACTCTCTCTTTTTTTCTTCTTTATTTTCAACTCTCATCCATTCAAATTCATTCATTCATTCTCATGGAACAAGAACCCAATTACAGAGGTGTTCGTAAGCGTAAATGGGGAAAATGGGTCTCCGAAATCCGCGAACCGGGCAAAAAAACCCGAATTTGGCTCGGTAGCTACCACCTCCCGGAAATGGCCGCCGCCGCTTACGACGTCGCCGCACTCCATCTCCGTGGCCCCGAGGCCCGCCTCAACTTCCCCGAGCTGGCCGAGTCCTTCCCCCGCCCGGCCAGCTCCTCCCCTGACCACATTCAGGCCGCTGCCCACATGGCTGCATTGCAGTTCGCCAACACCAAACCGCCCGAACCGCCGGCGCCGGTTCGGGTGGGGCTGTCCCCTAGCCAGATTCAGGCCATTAATGAGTCGCCGTTGGATTCTCCGACCATGTGGATGCAGATGGCGGCGGAGGCGCTTTCTTTACAGCCTCATGATTTGGACGAAGAATATTATAACATGCACCATCATTCTATTTGGGATTATTCTTCACTCTAATTACTGTTAACTTAATTAATTCTTATTATTAGTACTAATTCCTTCTTCTAATTAATTAATTAACTCCTTTTTTTCCACTTTAAATATATATGTATTATTCCTTTCCCCCAATGACCCATCCTACATATGTTGTATCAATGATGAGTGTGACTCAAAA 808 46.53 MEQEPNYRGVRKRKWGKWVSEIREPGKKTRIWLGSYHLPEMAAAAYDVAALHLRGPEARLNFPELAESFPRPASSSPDHIQAAAHMAALQFANTKPPEPPAPVRVGLSPSQIQAINESPLDSPTMWMQMAAEALSLQPHDLDEEYYNMHHHSIWDYSSL 159
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 488390 489197 - XM_039035006.1 Bhi06g00024 36363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g00024 159 SUPERFAMILY DNA-binding domain 6 64 IPR016177 GO:0003677
Bhi06g00024 159 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF022 5 155 - -
Bhi06g00024 159 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Bhi06g00024 159 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Bhi06g00024 159 PRINTS Ethylene responsive element binding protein signature 45 65 IPR001471 GO:0003700|GO:0006355
Bhi06g00024 159 Pfam AP2 domain 5 55 IPR001471 GO:0003700|GO:0006355
Bhi06g00024 159 Gene3D AP2/ERF domain 6 64 IPR036955 GO:0003700|GO:0006355
Bhi06g00024 159 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 5 155 - -
Bhi06g00024 159 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Bhi06g00024 159 CDD AP2 5 65 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g00024 Bhi-Chr6:488390 Bhi06g02000 Bhi-Chr6:54954420 3.52E-35 dispersed
Bhi06g00024 Bhi-Chr6:488390 Bhi06g00027 Bhi-Chr6:622670 1.51E-63 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1288 PF00847 AP2 3.30E-13 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g00024 - - csv:101207003 263.462