Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g00114 TTTGGCAAGACCCTGAAAAAGATATTCAACAATATCTCATATTATTATTTTTTATTTTGTATTCAAAGGAGAAAGAAATGATGTTTATCTTCTATTGCTTTGCTTTCATTTTAATATTATATGAAGAGACGAGGAAAATCGTATACTTAAAGACTCGTTTCCTTCTCCTTCTCCATTCCAATTTCTTTTCGCTCTTTCCCACCTAACTTCCTTTCCTTCTTTGTTTTGCCCTTTCGCCGCATTTTAATTTCTTGTTTCTTTGTTTTTCTCACTCTCATTGCTACTTCTTCTACTGATTTTGTTCTTATTTTTGTTGAGTTCGATTGATTTCATCTAATCTGCAGACCCCATTTATTGAAATCCGTGAATTCGTCCAGATTTGCACTGTTAATGCCTCCATTTTTATTTTCTTTGGTATATTAATTTTGCTTATTGGGGTTGTTAAGCACATTGTACACTATTTCCTCTTTGTTTTTCTGGATCTGGGTATTGTTGGTTTGTGTTAATTTAGGTGAAATTTTCTGTTCTGGCTTCTGGGTTTTTACCAAAACTTCAAATTACTTCTGGGTTTGTAAGATCTATTACATTAGTGGGTTTTTTTTTTGGGTCAAAATGGCTTATGATCATTTGGATCCATCTAAAAGCTATTCAGTTGCTTCAGGGCCAGGGTCAGTTTCAAGGCCTGCACCAGAATTGAAGCTGTATCAGTTTTTTGTTTTCTGTATTCCAATTCTTTTCACTTTCATTCTTCTTTTCCTTTTCTATCTCCTTTATCTTCGTCGACGACGGGCTGATTGGACTTCCATTCGAATGCGAACTTCTGCTGCAGTCAATAACAATAACATCTCTACATCTGAAGTTGGGTTGAAGAAGGAATTCAGGGAGATGCTTCCTATTATTGTATACAATGAGACATTCTTTGTCACTGACACGCTTTGTTCAGTCTGTTTAGGAGAATACAAAACAGAAGATAAACTTCAGAAAATACCATCATGTGGGCATGTATTTCACATGGACTGCATTGATCATTGGCTATCCAACCACAACACTTGCCCTCTCTGCCGTCTCTCCGTCCTCTCTCCATCGTCTCAACCACCGCATGTTCAAATCGACGTGGGACTCGAATCGTCGAATGAACCACAATGCGACGAAGCACCTCCTCCACACAGTAATCAAGCTTGTCAACATACAACACCTCCAGTGTAAAGGTCATAATCTGAGTTCTCAAGGGGGAAGAATCGTTCATTGCTGCAGCAAGTAAAAGGGATGCGACATTGGACAATTCATCAAGAGAAGACGAGATTCCGAGGGAGAAATCAGGACGTAAATAGCTGTTCAATTGCGAACGACTGACACCCAGCCCGGTTTTTAGAACAGAAATCTGTAGTTTGTGTAATTGTTTTACCCAAGTGCTGTAACATTTCAAGACTGATTTGATGAGGACCATGAAATTTCCAAAGTAGTTTGTTTCATCTCCAAACAGGTCAGGAGGCATTTCCTGTTTTTGGGGGCAACAGCATTTAGAAACATGGCTTCACCATTTTTTTTTGTCAAAAATTATGGTACCAAGACTTTGTTACTGGGGCCATCCTGGCATAATAGACCCTACAAGGCCAGACATGTAATCTATGAATTCATAATATATAATAATAATAATAATGATATCTAAATTGTGATAA 1679 37.64 MAYDHLDPSKSYSVASGPGSVSRPAPELKLYQFFVFCIPILFTFILLFLFYLLYLRRRRADWTSIRMRTSAAVNNNNISTSEVGLKKEFREMLPIIVYNETFFVTDTLCSVCLGEYKTEDKLQKIPSCGHVFHMDCIDHWLSNHNTCPLCRLSVLSPSSQPPHVQIDVGLESSNEPQCDEAPPPHSNQACQHTTPPV 197
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3158732 3161562 - XM_039033647.1 Bhi06g00114 36453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g00114 197 CDD RING-H2_EL5_like 109 151 - -
Bhi06g00114 197 MobiDBLite consensus disorder prediction 1 20 - -
Bhi06g00114 197 MobiDBLite consensus disorder prediction 179 197 - -
Bhi06g00114 197 PANTHER RING-H2 FINGER PROTEIN ATL7-LIKE 12 160 - -
Bhi06g00114 197 Pfam Ring finger domain 109 151 IPR001841 -
Bhi06g00114 197 SUPERFAMILY RING/U-box 93 161 - -
Bhi06g00114 197 ProSiteProfiles Zinc finger RING-type profile. 109 151 IPR001841 -
Bhi06g00114 197 SMART ring_2 109 150 IPR001841 -
Bhi06g00114 197 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 156 IPR013083 -
Bhi06g00114 197 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 12 160 - -
Bhi06g00114 197 MobiDBLite consensus disorder prediction 171 197 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g00114 Bhi-Chr6:3158732 Bhi12g00125 Bhi-Chr12:3928377 4.87E-28 dispersed
Bhi06g00114 Bhi-Chr6:3158732 Bhi02g00818 Bhi-Chr2:16747519 1.60E-16 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g00114 K19039 - csv:101219324 363.999