Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g00128 CCATTGCCACCTATTACTTTTTTTTAAAGATAAAGCTACCAAACTTTTTTGGTTTACTATTATTTTGAAATTCTAGGACACAAGAGAAAAATTATATTACTCAAAAAGAAAAAGAAAAAGAAAAAAATGTCTTCTTCCATTTCTGCTTGTGAAATTTCAAGCTCCAAACTTCCATGGAAGTACCGTTTATTACTCCGACTAGGTACTATAATCACCGACGCTTGTTGCCGATCCAATTTCACCGTCAACCGTTGGCTCACCGGAATCCTCGACTGGAAAATCCCTCCTTCTACCAAACCAATCGACGGCGTCTCCTCTTTCGATCTCACCATCGACACTTCCCGCAACCTCTGGGTTCGAATCTTCAATCCCATTATCGACGGTGAACATCCAAATCTTCAATCTGTGCCGGTGATTTTCTATTTCCACGGCGGTGGCTTTGTCTTCTCTTACGCCGATTCAGCCCTCTTCCACATGGCTGCTCACCGATTGGCCAAACAGTTACACGCCGTTGTAATCTCCGTCAACTACCGCCTCGCTCCGGAGTTCCGGTGTCCATGCCAATACGACGATGGATTCGACGCCGTGAAATTCATCGACGAAACGGATGAGGGAATCCTTCCGGAAAAGGCGGATCTGAGCCGTTGCTTCATTTTGGGGGAAAGCGCCGGAGGAAATCTAGGGCACCACGTGGCAGTGAGAGCGAGCGAGTACACGTTCAAGAAACTGAAGTTGATTGGTTTTATAGCGTCGCAGCCATTTTTCGGCGGGGAGGAGAGAACAGAGTCGGAGATGCGGCTGCGGAATCAGCCGCCGTTGAGTCTGAGACTTTGTGATTGGTTCTGGAAGGCGTTTTTGCCGGAGGGGGAAAATCGAGACCACGCGGCGGCGAATGTGTTTGGGCCGAATGGAAGAGATGTTTCGGAGGTGGTGAAGTTTCCGGCGACGGTGGTTTTCGTCGGAGAGTTGGATCTGTTGCAGGATGGGCAGAGGAAGTACTATGAAGGGTTGAAGAGAATGGGGAAGAATGTGAAAATGGTGGAATTTCCAAACGCCATTCATGGATTCTTTGCGTTTTGGGATCTGCCACAATATTCTTCCATGATTAAAGAGATGAAGGATTTCATTGCCACCGAATTCCATAACTCTCCTCCATTAATTGTTCATGGTTCTTCCTAACAAAGTCATAGGTTCATGGTTGAATTATAAACTACTTTCGAGGACATAGTTAGTTGTGTTTGGGTTGACTTTTTAAGTATCTAATAAGTCTTTTAGAGTGTTTGGATTGACTTTTTAAGTATCTAAATAAGTCTTTATATATGTATAGAAAAAATATTTATAAACCATTAGAAAGTCAATCTAAATGGATCTTTAGTTACTCCAAACTAGAGTTTTT 1396 43.91 MSSSISACEISSSKLPWKYRLLLRLGTIITDACCRSNFTVNRWLTGILDWKIPPSTKPIDGVSSFDLTIDTSRNLWVRIFNPIIDGEHPNLQSVPVIFYFHGGGFVFSYADSALFHMAAHRLAKQLHAVVISVNYRLAPEFRCPCQYDDGFDAVKFIDETDEGILPEKADLSRCFILGESAGGNLGHHVAVRASEYTFKKLKLIGFIASQPFFGGEERTESEMRLRNQPPLSLRLCDWFWKAFLPEGENRDHAAANVFGPNGRDVSEVVKFPATVVFVGELDLLQDGQRKYYEGLKRMGKNVKMVEFPNAIHGFFAFWDLPQYSSMIKEMKDFIATEFHNSPPLIVHGSS 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3321554 3322949 + XM_039034434.1 Bhi06g00128 36467

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g00128 350 Gene3D alpha/beta hydrolase 2 336 IPR029058 -
Bhi06g00128 350 PANTHER ACETYL ESTERASE 12 337 - -
Bhi06g00128 350 Pfam alpha/beta hydrolase fold 97 315 IPR013094 GO:0016787
Bhi06g00128 350 PANTHER ARYLACETAMIDE DEACETYLASE 12 337 - -
Bhi06g00128 350 SUPERFAMILY alpha/beta-Hydrolases 50 335 IPR029058 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g00128 - - - cmo:103498754 611.683
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g00128 Bhi-Chr6:3321554 Bhi08g02130 Bhi-Chr8:61259535 2.45E-116 dispersed
Bhi12g02614 Bhi-Chr12:80756801 Bhi06g00128 Bhi-Chr6:3321554 6.97E-44 dispersed
Bhi06g00124 Bhi-Chr6:3243558 Bhi06g00128 Bhi-Chr6:3321554 8.90E-117 proximal
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1718 . . . Bda03g00361 . Bpe04g00321 Bma04g00338 . . . . Cma09g01288 . . . Cpe06g00972 . . . . . . . . Cla08g00161 . Cec08g0097 Cco08g0221 . Cmu08g0153 Cre08g0140 . . . . . . . Cme09g00112 . . . . . . . . Sed10g1646 . Cmo09g01246 . . . Car09g01103 . . Bhi06g00128 Tan10g1852 Cmetu11g1682 . . . . Cla11g00796 Cam11g0832 Cec11g0818 Cco11g0820 Clacu11g1028 Cmu11g0889 . Lsi08g00162 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000161 3 6 3 2 2 10 7 9 9 7 8 9 7 7 10 8 9 1 6 8 8 5 7 8 9 11 7 4 7 3 200
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi06g00128 Bhi_Chr06 FPKM 7.253002 8.835984 10.047697 10.658216 23.685556 23.633385 24.610184 7.219764 7.610186 7.292134