Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g00145 TATGGTAATAAGTTTTATATTTTGTTTTTCTTTCTAAATGATCTTTGAAAACAGATTGAGAAATCAGAAGCTTGAAGGCTCCGAAAAAGGAAGAACAGTTTCAAGTTTGATCCAAGGAAGCAAACTTTCAGAGTGGCATCATTTTCTAGTTGATCAATCAGCAGTTTGAATTGATGTGCAATGCGGAGACCTGTTGGAGCTCTTCTGCGTGATAGAAGAGCTGTTCAAGTGCCTATTAGTGGAAGAAATCTTTTGTATAAAATTTCTGTGTCTTTGGTTTTTATTCTGTGGGGAGTTATCTTGCTCTTTAGCTTATGGTTCAGCCGTGGCGATGGCTGCCAAGAAGGATCAGTTTTACTTCCTGATGGTGTATCTACTTCAAATGAATCTAAATTGGAAAAGAACAAGGACTCTGACGTTTTATATGAACCTCCAATGGGAGAAACTGAATGTACCATTCATTTAAAAGATTCATGCTCAATTGATACTGCAAGCCCTGGTTCTGACAATGAAATACTTTCAAGTGAAGAAAGTAGCAGTCATATACAAGCTCCTACGAGGTTGCCTGAGGCTGAGAGCTCTAGCACTGGAGTAAAATCTGAAAGCAAACCTCTCAAGGGAGATATCTCGTCGGACACTGTTCTACTCAGCCTTGAAGAATTCAAAAGCAGAGCCTTTATATCCCGGAGTAAGTCTGAAACTGGCCAGGCTGGGAATCCTATCCATAGAGTAGAACCTGGTGGTGCAGAGTACAATTACGCTTCAGCTTCAAAGGGAGCAAAGGTTTTGGCTTTCAACAAGGAAGCAAAGGGAGCTTCAAACATTTTAGGCAGGGACAAAGATAAGTACCTCAGAAATCCATGTTCTGCTGAAGAGAAATTTGTTATCATAGAACTTTCAGAAGAAACCTTAGTAGTAACAATTAAAATTGCTAATTTTGAGCACCATTCTTCTAACTTAAAAGAATTTGAGGTACATGGGAGTTTGGTTTATCCAACAGATGTTTGGTTCAAGCTCGGTAATTTCACTGCTCCAAATGCAAAGCAAGCACATAGATTCGTTCTCAAGGACCCAAAATGGGTGAGATATTTAAAGTTAAATTTTCTTACCCATTATGGTTCAGAATTCTATTGCACACTCAGCACTGTGGAAGTTTACGGAATGGATGCTGTTGAGATGATGCTAGAGGATTTAATATCTGCTCAACATAAACCTTCTATATCAGATGAAGCTACTACTGATAAGAGAGTAATTCCCTCCCAGCCTGGACCCAATGATGAAGAACAACATGGTAGAGAGTTGCATTCTCTTGCTACTGAGGAAAGTGATGATGATGTTGTTTTAGAACTCACAAAGAGCAAGACACCTGATCCAGTCGAAGAATCACACCATCAACAGCCTGGCAGAATGCCTGGTGACACTGTTCTCAAAATTTTGACACAGAAAGTTCGTTCACTAGACCTAAGTTTATCTATTTTGGAGCGGTATCTGGAGGATTTAACTTCCAAATATGGCAATATATTCAAAGATTTCGACAAAGATATAGCAAATAATGATCTACTCATTGAGAAGACCCGAGAGGATATAAGAAATATTCGTAAAACCCAGGACATCACAGACAAAGAACTTCGTGATCTCATTTCTTGGAAGTCCATTGTTTCCTTACAGTTGGATGGTCTGCAAAGACATAATTCTATCCTCAGATCTGAGATTGAAAGGGTCCAGAAGAATCAGACTTCACTGGAAAACAAAGGAATAGTTGTTTTTCTTGTGTGCCTCATTTTTTCATCATTTGCTATTTTTAGGTTATTTTTGCACATTGTTCTTAGAGTATATGAAAGAACAAATAATTCCAGGAAATTTTGTTGTGTAAGCCCTTCCTGGTATCTATTGCTTTTGAGCTGTTGTATTATTCTTTTCATACAGTCACTGTAATCAAGGATTGCCCCCTTATTTCTCCA 1961 38.4 MRRPVGALLRDRRAVQVPISGRNLLYKISVSLVFILWGVILLFSLWFSRGDGCQEGSVLLPDGVSTSNESKLEKNKDSDVLYEPPMGETECTIHLKDSCSIDTASPGSDNEILSSEESSSHIQAPTRLPEAESSSTGVKSESKPLKGDISSDTVLLSLEEFKSRAFISRSKSETGQAGNPIHRVEPGGAEYNYASASKGAKVLAFNKEAKGASNILGRDKDKYLRNPCSAEEKFVIIELSEETLVVTIKIANFEHHSSNLKEFEVHGSLVYPTDVWFKLGNFTAPNAKQAHRFVLKDPKWVRYLKLNFLTHYGSEFYCTLSTVEVYGMDAVEMMLEDLISAQHKPSISDEATTDKRVIPSQPGPNDEEQHGRELHSLATEESDDDVVLELTKSKTPDPVEESHHQQPGRMPGDTVLKILTQKVRSLDLSLSILERYLEDLTSKYGNIFKDFDKDIANNDLLIEKTREDIRNIRKTQDITDKELRDLISWKSIVSLQLDGLQRHNSILRSEIERVQKNQTSLENKGIVVFLVCLIFSSFAIFRLFLHIVLRVYERTNNSRKFCCVSPSWYLLLLSCCIILFIQSL 584
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3517037 3521139 - XM_039034813.1 Bhi06g00145 36484

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g00145 584 PANTHER MEMBRANE PROTEIN CH1 RELATED 12 583 IPR045120 GO:0016020
Bhi06g00145 584 Coils Coil 497 524 - -
Bhi06g00145 584 Pfam Sad1 / UNC-like C-terminal 206 328 IPR012919 -
Bhi06g00145 584 MobiDBLite consensus disorder prediction 104 148 - -
Bhi06g00145 584 MobiDBLite consensus disorder prediction 393 407 - -
Bhi06g00145 584 PANTHER GALACTOSE-BINDING PROTEIN 12 583 - -
Bhi06g00145 584 MobiDBLite consensus disorder prediction 393 412 - -
Bhi06g00145 584 MobiDBLite consensus disorder prediction 344 373 - -
Bhi06g00145 584 MobiDBLite consensus disorder prediction 104 141 - -
Bhi06g00145 584 ProSiteProfiles SUN domain profile. 163 330 IPR012919 -
Bhi06g00145 584 SUPERFAMILY Galactose-binding domain-like 212 326 IPR008979 -
Bhi06g00145 584 Gene3D - 210 338 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g00145 - - - csv:101220988 989.178
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bhi04g02551 Bhi06g00145 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g02555 Bhi-Chr4:68670485 Bhi06g00145 Bhi-Chr6:3517037 0 dispersed
Bhi04g02556 Bhi-Chr4:68670485 Bhi06g00145 Bhi-Chr6:3517037 0 dispersed
Bhi06g00145 Bhi-Chr6:3517037 Bhi12g00120 Bhi-Chr12:3849743 1.02E-123 dispersed
Bhi06g00145 Bhi-Chr6:3517037 Bhi06g00146 Bhi-Chr6:3517037 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1715 Blo01g01681 Blo12g00813 . Bda03g00359 . Bpe04g00319 Bma04g00336 . . . Cma01g00876 Cma09g01292 Car01g00801 . . Cpe06g00977 . Bhi04g02551 . . . . . . Cla08g00151 Cam08g0147 Cec08g0104 Cco08g0212 . Cmu08g0148 Cre08g0131 Cone4ag1155 . . . . . . Cme09g00106 . . Bda11g00923 . . . . . Sed01g3805 Cmo01g00919 Cmo09g01250 . . . Car09g01108 . Cpe02g00987 Bhi06g00145 Tan10g1859 Cmetu09g0015 . . . . Cla11g00801 Cam11g0837 Cec11g0822 Cco11g0824 Clacu11g1021 Cmu11g0883 Cre11g1281 Lsi08g00153 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005606 0 3 0 0 0 1 3 1 1 1 1 1 2 1 2 2 1 0 3 1 1 2 3 1 1 1 2 2 1 2 40
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi06g00145 Bhi_Chr06 FPKM 12.726714 13.477246 10.018907 10.922119 10.428309 9.320278 10.584894 15.477575 14.467903 15.022836