Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g00159 AAGAAAAATGAAAAAGAAAAAGAAAAAAAGAAGAAAGGGAAATGGAGAGAGAAATTGAGAAATAAATATCTCGAAAAAGGGATATGATTGCAAATTCGGCAGAGAAGAAAGAGAATAATGGAGAGTCGCTAAGAAAATATTCCAACCCGACCTTACAAAATGCAGAGTTCATCATCATCTTCTTTGGATTGTCCTAAGATGAACTACGACGTGTTCATAAGCTTTAGAGGTAGAGATGTTCGTCACACTTTTGCAGGATATTTGTATGATGCTTTGAATCGTTTGGGGATAAAAGCTTTCCTGGACGACAAGAGGTTTCTAATTGGAGATGATCTTCATGGCTTATTCCAAATAATCGATGAATCGAGATCTGCCATTGTCGTTCTTTCTGAAGATTATGCTTCTGCTAAATGGTGTTTGAGAGAGTTGACTAAGATAATGGATTCCATGGGAACTACGATGGATCGTGTTCTTCCTGTGTTTTATCATATTGATCCATCGGTTGTTAAGGATCAATCTGGAACTTTTAAGAAAAGTTTTGATGAACATGAAGCCAATGCTCTAAAGGAAATTGATGATCAAGAGAAGGAGAAGCGCTTGAAGGAACTCCAAAGTTGGAAAAGTGCAATGAAGAAAATTGGCAATCACACTGGAGTTGTCATCACTAAGAATAGTTCTGAGGTAGACATAGTAAATAAAATTGCAAATCAAATATTTGATGTATGGCGTCCTAAGTTGGAAGCATTGAATAAGAATCTAGTTGGAATGACATCTCGATTGCTCCATATGAACATGCATCTTGGTTTAGGATTAGATGACGTACGCTTTGTTGCGATAGTAGGAATGGGTGGTATTGGTAAAACAACTATTGCTCAAGTTGTTTTTGATTGTATTCTTTCAAAGTTTGATGATTGCTGCTTTCTAACATTACCTGGAGGTGATTCAAAGCAAAGTTTAGTGTCATTACAAAGGGAAATGCTTTCTCAAATTTTTCATAAAGAAGATTTTAGAATATGGCATGAGAATCATGGAGTAGAGATGATAAAAAATCGACTGAGTGGTAGAAAGGTTCTTATTGTTCTTGATGGTGTTGAAGAGAGAAGGCAGTTAGAAATGTTGGCTGGAAGCGCCGAGTGGTTTGGTCCTGGAAGCAGAATCATCATTACAACTAGAAATAAAGGAATATTGAACCATCATAATTATGATGAAATGAAAGAATACAACGTTGAGGAACTAGATCATGATAGTGCTCTTCAGCTCTTTTTGAAGCATGCCTTTGGTAGTAATCATCAAAACAATGACAGTTTCATGGATCTCAGTAACGAGATGATTGAGAAGGCTAAAAGACTTCCATTGGCTTTAAGAGTGATTGGATCCTTTTTGTATGGTAAAGAGATTACAATATGGAGAGAAACATTGAAGAGGCTCATCAAAGTGGATGAAAGAAGTTTTTTTCATGTATTGAAAATAAGTTATGATGGATTGGGAGTAGAAAGCCAACAAGTTTTTCTTGACATTACATGTTTCTTCAATGGAAAAAATGAAGATAGAGTAATTGAAATATTGGAGAGTTTTGGTTATAGCCCTAAGAGTGAAATACAATTATTGATGCAAAGATGTTTAATTGAAGTTTCACATAAGAAAATATTGGTGCATGATTTAATTCTTGAAATGGGTCGAGAAATAGTGCGTAAGGAGTCTCTCACTCAACCAGAAAAACAGAGTAGGATTTGGCTTCATGAAGATCTCTACTGCAAGTTTGCTGAAAAACATGACTTGATGCATATTCAAGGGATAGTTTTAAGTTTGGAAAAAGAAATGGAAGAATCCATAGAATTGGATGCCGAATCCTTTTCCGAGATGACCAAACTAAGAATATTGGAAATCAATAATGTGGAGCTCTCTGAAGACATTGAATATCTCTCTCAATTGTTGCGGATAATTAATTGGCCTGGTTATCCTTCAAAGAGTTTGCCTCCAATGTTTCAATCGCGATATTTGTTTGAACTACTCTTGCCTCATAGTCACATTTTACGACTTTGGGATGGAAAAAAGAGATTTCCAAAGCTGAAAGTAATTGATGTTAGTAACTCAGAACACTTGAGGGTGACACCTGATTTTTCTGGGGTTCCAAATCTTGAGAGATTGGTTCTAAGTAACTGTGTCAAATTGTGTGAGATTCATCCCTCCATCAATTCTCTCAGCAAACTCATTTTACTGGATTTAGAGGGTTGTGGTGATCTTAAACATTTTCCACCAAATATAAGATGCAAAAATCTCCAAACTTTGAAACTTTCTGGTACAGGTCTTGAAACTTCTCCAGAGATAGGGGGAAATATGGAACATTTGACTCATCTTCATCTTGATGAATCTAATATAACCCAACTTCATCCTTCAATTGGGCATCTAACTGGCTTAGTTTTGCTGGACCTATCCTCCTGTTTGGGCCTTTCTAGTCTTCCTTGTGAAATTGGTAACTTGAAGTCTTTGAAAACCCTCCTTTTGAAATATTGTGAAAAACTTGACCAAATCCCGAAAAGCTTAGCAAATGCAGAATCCTTGGAGACACTTTGTATTAGTGAAACTTCTATAACCCATTTACCATCAAGCATTATTCATTGTTTGAAGAATTTAGAAACATTAGAATGTGAAGGACTATCATGTGGAATTTGGAAGTCAATGCTCCCCCAATTCAACATTCATCAAACAGTATCTACTGGTTTGGGGTGCCTTAAAACTCTTAATTTGATGGGTTGCAAACTTATGGATGAGGACATTCCTGAAGATCTCCATTTCTTTTCCTCATTAGAAACACTAGATCTGAGCTATAATAACTTCACAACACTCCCTGTTAGTCTTAGCCACCTCAATAAGTTAAAAACATTGAACCTGAATTTTTGCACTGAGCTTAAAGACTTACCAAAGCTTCCAGACAGTTTGCAATATGTAGGAGGAATAGACTGCAGATCAATGTCAGAACAATATTATAACAAAATTTTGCTTATCCCTTCAAGTTCTGGACACCAACTTTACCTTAATTTTATCATTCGTTCCAAGGATGCAAATGTAGAATGTGCCATGAACGAGTTCCAACATTCGATATTTACTCGAAGATCGTTTGAGCTAAATATTATAGAAGAGAAACCATCCACTATCATCCATAAAGATGTCGACATGTTGGAGTGGTTTGGCCAGATAAATGAAGGGAATTGGATAAACATCCAGTATGAGCAAGAATTCTCAATCAGTAAACCACTCAATATCATGTATGAAGATGTTGATCTAAGCAATGTTTGTGGAGTTTTCCTCTCAACAAACATTGAATTTCCACAAAATTTAGATCATCTTGCACTTGGAAGATTCTCAGTTAGCTTTGAAATTGATGGGAAATGTTCTGGTGGGACAATGGGTTATGAGATGTCCCAATTTAAAGCTACAAGATTCTTTTGGGTAGCATACATACCGATTTGGATGTTTATACATCATAGTTTGATGGTTCAAAGATGTTGCTCTATCAAGGCTACAATTAGTTATTTTTGTGATCATATCGATGCAAGCAAGGTCAAAATCAAAGCATGTGGTGTTTCATCTTTACTCTCCTGGCCAAATGTATCAGAGTATTTGGCAAAGTTGTTCGCTAAACGTTATTGCTCTAAACGCAATTTCTGCACCATGATTCGACAACATAATGATCATAATAGTGAATGTAGGTGTGATGAACTTGAGGTTGCAAAGGATGACTTTTCATCCTATACATTTGAATCTGATGATTCAACATTTTTGCTAAGGATGAACCTCAGAGCAATACTGGGGATAATGTTCGAGGAAAAAAAGCGTTACTACATGAAATACTTCTTCCCACAAACAAAATTTTTTGGATGGTTCAAAAATCAGAACAAGAAAGACAAAGTAGCAGTGAAGATTCCTGTAAATATAGACAAAGACAAGAAGTGGATGGGGTTGGCAATGTTCGTCGTCTTCTCGATTTCCAAGAAAGCTTCTTGTTATTGCTTTGAGTATGAAATACAAACAAAGGAAAAGATTATATCCACCCAAAGGCACTCTATCCCTAAGGAGGTTGCAGAGTATTCAAATCAAATACTGTTTATTGTGTTTGAACCACGGTATAATTGGTATCCTTATGATGAACTAAAGTCTTCTTCATCCAACCATGTTTACATTAATTTCAATACTAATAGTGAAAGAATGCGAGTTGAGTTATGTGGAGCTCGTTTAGTTTATCAGCAAAATGTTGAAGGACTTATTCACACAATCGTGAATTGCATAGTGAAGAGTGGGGATGAGCTTTATGAATATTACAACCAACAAATTGTGGAATATCATTTGAAAATGATTAATACACATTGGTATACAATCTCATTGCCTCGAAATAACCCTGTGAAGAATCAAAAACCAACTACTGCTTCAACTTGTATTGCTTCAAGTCTTTCAGTTGAGCACCTTTTACATGGAAGTTTCCCACACCCATTCTTCCATAAGTCCATCCAGGAAAGATTTGGAAGTAAGTTTGATCTTCTTCTACGTGGTGATAAGATCCCAAAATTTTTCACCAGTCAAAGCAGAGGAAACATGACTGAAATAAAGTTACCACAATATTTGGAAAATTTTCGTGACAGTGTAGGTCTTGCTGTGTGTGCTCTTGTGGTTGTGGACAAGAAAAGAAGAAAACTAAATGACATTATTCCAGAACAAGAGAGGTATACAAAAGTTGTGGATCTCATATGCAAATTCAAAGTTGACTCATATCAAATTTTGCAAGAGCACTGTCACTTTGTATCTCAACAAAAACTCTTGAGTGAATATGCTTCACAGTTCATTTGGCTCTCTTACATTCCCCTTAATGGATTTGATATCAATTGGCATTATTGCACCCAGTTTCAAATTACACTTGAAACTAGTTGTTATGAGCTATTTGGAGTGAAGAATTGTAGTCTTCATCTGATACATAAACATGAAAGGATGATGATTGATAAGATGATAATGGAGTCAGCTGTTCCATCCTCCACTAGCCACAAAGGAAAGGGGCCTCAAATTCAATGATGACATTGGACAAAAGATGAACTGTGAACTTTATCTTTCAAGTGTTTGGTTTTGTATCAATAACCTTTTTTGTTTCTTTACTTAGTTGTGGTTTTGTGAGATGCTATCATCTTTAAAACAATTAATATTTATAAATGAAA 5201 35.7 MQSSSSSSLDCPKMNYDVFISFRGRDVRHTFAGYLYDALNRLGIKAFLDDKRFLIGDDLHGLFQIIDESRSAIVVLSEDYASAKWCLRELTKIMDSMGTTMDRVLPVFYHIDPSVVKDQSGTFKKSFDEHEANALKEIDDQEKEKRLKELQSWKSAMKKIGNHTGVVITKNSSEVDIVNKIANQIFDVWRPKLEALNKNLVGMTSRLLHMNMHLGLGLDDVRFVAIVGMGGIGKTTIAQVVFDCILSKFDDCCFLTLPGGDSKQSLVSLQREMLSQIFHKEDFRIWHENHGVEMIKNRLSGRKVLIVLDGVEERRQLEMLAGSAEWFGPGSRIIITTRNKGILNHHNYDEMKEYNVEELDHDSALQLFLKHAFGSNHQNNDSFMDLSNEMIEKAKRLPLALRVIGSFLYGKEITIWRETLKRLIKVDERSFFHVLKISYDGLGVESQQVFLDITCFFNGKNEDRVIEILESFGYSPKSEIQLLMQRCLIEVSHKKILVHDLILEMGREIVRKESLTQPEKQSRIWLHEDLYCKFAEKHDLMHIQGIVLSLEKEMEESIELDAESFSEMTKLRILEINNVELSEDIEYLSQLLRIINWPGYPSKSLPPMFQSRYLFELLLPHSHILRLWDGKKRFPKLKVIDVSNSEHLRVTPDFSGVPNLERLVLSNCVKLCEIHPSINSLSKLILLDLEGCGDLKHFPPNIRCKNLQTLKLSGTGLETSPEIGGNMEHLTHLHLDESNITQLHPSIGHLTGLVLLDLSSCLGLSSLPCEIGNLKSLKTLLLKYCEKLDQIPKSLANAESLETLCISETSITHLPSSIIHCLKNLETLECEGLSCGIWKSMLPQFNIHQTVSTGLGCLKTLNLMGCKLMDEDIPEDLHFFSSLETLDLSYNNFTTLPVSLSHLNKLKTLNLNFCTELKDLPKLPDSLQYVGGIDCRSMSEQYYNKILLIPSSSGHQLYLNFIIRSKDANVECAMNEFQHSIFTRRSFELNIIEEKPSTIIHKDVDMLEWFGQINEGNWINIQYEQEFSISKPLNIMYEDVDLSNVCGVFLSTNIEFPQNLDHLALGRFSVSFEIDGKCSGGTMGYEMSQFKATRFFWVAYIPIWMFIHHSLMVQRCCSIKATISYFCDHIDASKVKIKACGVSSLLSWPNVSEYLAKLFAKRYCSKRNFCTMIRQHNDHNSECRCDELEVAKDDFSSYTFESDDSTFLLRMNLRAILGIMFEEKKRYYMKYFFPQTKFFGWFKNQNKKDKVAVKIPVNIDKDKKWMGLAMFVVFSISKKASCYCFEYEIQTKEKIISTQRHSIPKEVAEYSNQILFIVFEPRYNWYPYDELKSSSSNHVYINFNTNSERMRVELCGARLVYQQNVEGLIHTIVNCIVKSGDELYEYYNQQIVEYHLKMINTHWYTISLPRNNPVKNQKPTTASTCIASSLSVEHLLHGSFPHPFFHKSIQERFGSKFDLLLRGDKIPKFFTSQSRGNMTEIKLPQYLENFRDSVGLAVCALVVVDKKRRKLNDIIPEQERYTKVVDLICKFKVDSYQILQEHCHFVSQQKLLSEYASQFIWLSYIPLNGFDINWHYCTQFQITLETSCYELFGVKNCSLHLIHKHERMMIDKMIMESAVPSSTSHKGKGPQIQ 1633
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3789033 3798954 - XM_039034602.1 Bhi06g00159 36498

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g00159 1633 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 198 716 - -
Bhi06g00159 1633 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 742 939 - -
Bhi06g00159 1633 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 198 716 IPR044974 GO:0006952
Bhi06g00159 1633 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 742 939 IPR044974 GO:0006952
Bhi06g00159 1633 Pfam NB-ARC domain 220 422 IPR002182 GO:0043531
Bhi06g00159 1633 ProSiteProfiles Leucine-rich repeat profile. 882 904 IPR001611 GO:0005515
Bhi06g00159 1633 SMART till_3 15 163 IPR000157 GO:0007165
Bhi06g00159 1633 Pfam C-JID domain 1462 1606 IPR045344 -
Bhi06g00159 1633 Gene3D - 11 188 IPR035897 -
Bhi06g00159 1633 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 165 IPR035897 -
Bhi06g00159 1633 Coils Coil 131 151 - -
Bhi06g00159 1633 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 197 453 IPR027417 -
Bhi06g00159 1633 Gene3D - 189 352 IPR027417 -
Bhi06g00159 1633 PRINTS Disease resistance protein signature 223 238 - -
Bhi06g00159 1633 PRINTS Disease resistance protein signature 298 312 - -
Bhi06g00159 1633 PRINTS Disease resistance protein signature 394 408 - -
Bhi06g00159 1633 PRINTS Disease resistance protein signature 679 695 - -
Bhi06g00159 1633 SUPERFAMILY L domain-like 498 924 - -
Bhi06g00159 1633 Gene3D Ribonuclease Inhibitor 546 702 IPR032675 -
Bhi06g00159 1633 Gene3D Ribonuclease Inhibitor 703 941 IPR032675 -
Bhi06g00159 1633 Pfam TIR domain 15 193 IPR000157 GO:0007165
Bhi06g00159 1633 Gene3D - 358 443 IPR042197 -
Bhi06g00159 1633 SMART LRR_typ_2 880 903 IPR003591 -
Bhi06g00159 1633 SMART LRR_typ_2 727 750 IPR003591 -
Bhi06g00159 1633 ProSiteProfiles TIR domain profile. 14 189 IPR000157 GO:0007165
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g00159 - - - csv:105435618 2967.18
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g00157 Bhi-Chr6:3789033 Bhi06g00159 Bhi-Chr6:3789033 0 dispersed
Bhi06g00159 Bhi-Chr6:3789033 Bhi06g00161 Bhi-Chr6:3789033 0 dispersed
Bhi06g00158 Bhi-Chr6:3789033 Bhi06g00159 Bhi-Chr6:3789033 0 tandem
Bhi06g00159 Bhi-Chr6:3789033 Bhi06g00160 Bhi-Chr6:3789033 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1698 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bhi06g00159 . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002302 0 14 0 0 0 1 0 2 2 1 2 2 0 1 1 0 2 0 0 1 1 0 5 3 7 2 2 6 5 0 60
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi06g00159 Bhi_Chr06 FPKM 5.99263 6.454787 2.968831 3.164604 5.542304 5.677074 6.598517 0.99084 1.26814 0.883019