Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g00270 GTAAATTTTTAAAAAATGTCAGCAGCCTGTCTTGCGTCTTCCTCCCTCTCGGTAATCTCTCTCCTCGACGTCTCTCTTCCTCCTCCAATCGCCGGCCACCGCTTTGCTGCCGTCGACTACCGGTGAGACTTTCTCTCTCCTGAACTCTTTTTCTCTCGTTCTGTCTTCAGTTCCAGCCGCCGCCGCCGCCTCCTCTGCCGTAACCCGCCGCACGCCACTGCTGCTGTCAATTTTCGCCGGATTTGAGGTTGTGGACCCTCTTCCATCCATTATCACCCGTAGAGCAAAGGAAGAGGATGCAAAGATGAACCCCTCCCCTATGTGAAATTAAGGGCAACGTTTGACCAAAGATGTCGCGAAGATCAACTAGGTTAGTGGAAAAGGCGAATGAATATTTAGAAAAAATCACAAGTAGTGAAACTGCAAAATCATCTAGAACTAAGAGACGTGGTGTACCTTGGGGAAATCTTAAATCTTCTAGGAGTCAGAAGTGGACACGAAATAATGAGATTAAGCTAAATGAAGTTACTTCATCTTTCGAGCAATTAGAAGGGAAGAAGAGAAAGAGATATAGTAAGAGGTCAATGGTCACAAGAGCAACGGCTTCAAAGAATTTTAGGTCTGAGGAGGGGATCAACAAAAAAGGGAGTGGGAGATTAGGGAAGAGGGTGTATTATCAAAAAGTGGTGTTTGATGGTGGTGACTTTGAGGTTGGGGATGATGTTTATGTGAGGAGGAGAGAAGATGCAAGCTCTGACGATGAAGACCCTGAAGTTGAGGAGTGTAGAGTGTGCTTTAAGTCTGGAAAGGCTACAATGATCGAGTGTGATGATTGTCTTGGTGGTTTTCATTTGAAGTGTTTGAAGCCGCCAATGAAGGTAATCCCTGAGGGGGATTGGATTTGTGAGTTTTGTGAGGCTGCTAAAATGGGCAAAGAGGTTCAGTTGCCAAAGCCTCTGGAGGGTAAAAAACGGGTTAGGACAATGAGGGAGAAGCTTTTGGCAGGCGATTTGTGGGCTGCTCACATTGAAAGTTTATGGAAAGAAGTAAATGGTAACCATCAGTGTAAGGTTAGATGGTATATAATCCCAGAAGAGACTGCAACTGGAAGGCAACCACATAACTTGAAGAGAGAGCTTTATTTAACTAATGATTATGCAGATATTGAGATGGAATCACTTCTTAGACTGTGTGAAGTCATGAATCCTAAAGACTACTATAATGCCAAGGAAGGGGATGATATATTTTTATGTGAGTATGAATATGACGTTCGTTGGCATAGTTTCAAGAGGTTAGCTGAAATTGATAAAGAAGAGGATAGCGAAGGAGTTGATAGTGACAAAGAGTGGAAGTTGGATCAGAGTGCAGACCCTGATTCAGATGGTGATGTGGAATATGAAGAAGAGAGAGCACAAATTTTACAATCTCGGAACTACTCAAGCTCAACCCATGAATTGGCTGCAAATTCAAGGAAAGGACGATTTTGTGGACTACAAAAGATAGGAGCTAAGAAGATCCCAGCGCATATAAGATGCCACAAACAGACTGAATTGGAAAGAGCAAAGGCAACCCTCATGTTGGCGTCACTACCCAAGTCTCTACCGTGTAGAAATAAAGAAATTGAGGAGATAACTACATTTATAGAAAGTGCTTTACGTGATGATCAATGCTTGGGGCGATGCTTGTACATCCATGGTGTTCCAGGAACAGGCAAGACAATGAGTGTGCTGTCAGTAATGAGGAACTTGCAGGCTAAAGTTGATGCAGGAAATATAAGGCCTCATTGCTTTGTGGAGGTTAATGGTCTAAAGCTGGCAGCACCAGAAAATATATACAGGGTTATACATGAAGCATTAACTGGGCACAGGGTTAATTGGAAAAAGGCACTTCAGTTGTTGACCAAACGGTTTTCAGATGTAAATAATTGCAGGGAGGATGAGCGACCTTGCATTCTGCTCATTGATGAACTTGATCTTCTTGTAACAAGAAATCAGTCAGTTCTATACAATATTCTTGATTGGCCTACAAAGCCACAAGCAAAGTTGATTGTGATAGGAATTGCAAATACCATGGACCTACCTGAGAAGTTGCTTCCTCGAATTTCAAGCCGAATGGGTATTGAAAGGCTTTGTTTTGGCCCCTATAATTATCAGCAACTTCAAGAAATCATTTCAAGCCGCCTCGAAGGAATCAATGCATTTGAGAAACAAGCTATTGAATTTGCATCGAGAAAGGTAGCTGCTATTTCAGGAGATGCGCGTCGTGCTCTAGAGATATGTAGGCGTGCAGCTGAAATTACGGATTATCATTTAAAGAAGCATCTTATGAAGAAACCGAGTTTTACTTCCGACACTGTTATTATTGTGAAAACACATGTTGGAATAGCTGAAGTGGAAGCAGCGATTCAAGAAATGTTTCAAGCACCTCATATTCAAGTGATGAGGAATTGTTCTAAGCAGAGTAAGATTTTCTTGACAGCTATGGTGCACGAACTTTATAAAACTGGAATGGGTGAAGCAACCTTTGAAAAGCTTGCCATGACTGTCTCGTATCTTTGTACAAGCAATGGAGAGGAATTTCCTGGATATGATGCTCTCCTGAAAGTTGGCTGTAGGCTTGGTGAGTGCAGAGTCATTTTATGTGAATCAGGGGCTAAACACCGGTTGCAAAAGTTACAGCTTAATTTTCCAAGTGATGACGTCTCATTTGCACTGAAAGACAGTAAGGATATACCTTGGTTGGCTAAGTATCTATAAATCTATTTTAGCTGCTAATATCTGTTGGGAACAATTTTGATCATATAATATACCAGTTTCAATTTTGCCCATATGAGACATTTAGACCCTCCTTTCGGAATTGAGCGAAGCAATACAGGTTGAAGTTACTGTTTTTTTTACTTCTCTTAATTTGATCCCATGGGAGTCTTGTTTTTAGAATCCTTGAGGTTGTCCGTTGAAAATTATGTAGTTTCTATTGTGTACTAGCTTTGAGCAACGTTCAATAGGATTCTACGTGTAGGTGGAGTTTAACCAAACCACTATAAAAATTATGGTATTTTCTTTTCTTACTCTA 3072 41.41 MSRRSTRLVEKANEYLEKITSSETAKSSRTKRRGVPWGNLKSSRSQKWTRNNEIKLNEVTSSFEQLEGKKRKRYSKRSMVTRATASKNFRSEEGINKKGSGRLGKRVYYQKVVFDGGDFEVGDDVYVRRREDASSDDEDPEVEECRVCFKSGKATMIECDDCLGGFHLKCLKPPMKVIPEGDWICEFCEAAKMGKEVQLPKPLEGKKRVRTMREKLLAGDLWAAHIESLWKEVNGNHQCKVRWYIIPEETATGRQPHNLKRELYLTNDYADIEMESLLRLCEVMNPKDYYNAKEGDDIFLCEYEYDVRWHSFKRLAEIDKEEDSEGVDSDKEWKLDQSADPDSDGDVEYEEERAQILQSRNYSSSTHELAANSRKGRFCGLQKIGAKKIPAHIRCHKQTELERAKATLMLASLPKSLPCRNKEIEEITTFIESALRDDQCLGRCLYIHGVPGTGKTMSVLSVMRNLQAKVDAGNIRPHCFVEVNGLKLAAPENIYRVIHEALTGHRVNWKKALQLLTKRFSDVNNCREDERPCILLIDELDLLVTRNQSVLYNILDWPTKPQAKLIVIGIANTMDLPEKLLPRISSRMGIERLCFGPYNYQQLQEIISSRLEGINAFEKQAIEFASRKVAAISGDARRALEICRRAAEITDYHLKKHLMKKPSFTSDTVIIVKTHVGIAEVEAAIQEMFQAPHIQVMRNCSKQSKIFLTAMVHELYKTGMGEATFEKLAMTVSYLCTSNGEEFPGYDALLKVGCRLGECRVILCESGAKHRLQKLQLNFPSDDVSFALKDSKDIPWLAKYL 801
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6250007 6344250 + XM_039034300.1 Bhi06g00270 36609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g00270 801 Pfam PHD-finger 145 190 IPR019787 -
Bhi06g00270 801 SUPERFAMILY FYVE/PHD zinc finger 131 195 IPR011011 -
Bhi06g00270 801 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 68 797 - -
Bhi06g00270 801 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 124 200 IPR013083 -
Bhi06g00270 801 ProSiteProfiles Zinc finger PHD-type profile. 142 191 IPR019787 -
Bhi06g00270 801 Pfam AAA lid domain 618 667 IPR041083 -
Bhi06g00270 801 Gene3D - 214 392 IPR043151 -
Bhi06g00270 801 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 411 653 IPR027417 -
Bhi06g00270 801 MobiDBLite consensus disorder prediction 21 48 - -
Bhi06g00270 801 ProSitePatterns Zinc finger PHD-type signature. 145 188 IPR019786 -
Bhi06g00270 801 Pfam ATPase family associated with various cellular activities (AAA) 446 591 IPR003959 GO:0005524|GO:0016887
Bhi06g00270 801 Gene3D - 397 591 IPR027417 -
Bhi06g00270 801 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 1 68 797 IPR020793 -
Bhi06g00270 801 MobiDBLite consensus disorder prediction 320 348 - -
Bhi06g00270 801 MobiDBLite consensus disorder prediction 320 341 - -
Bhi06g00270 801 SMART BAH_4 176 316 IPR001025 GO:0003682
Bhi06g00270 801 SMART AAA_5 441 594 IPR003593 -
Bhi06g00270 801 SMART PHD_3 144 189 IPR001965 -
Bhi06g00270 801 ProSiteProfiles BAH domain profile. 201 316 IPR001025 GO:0003682
Bhi06g00270 801 Pfam BAH domain 225 313 IPR001025 GO:0003682
Bhi06g00270 801 Gene3D - 592 686 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g00268 Bhi-Chr6:6250005 Bhi06g00270 Bhi-Chr6:6250007 0 dispersed
Bhi06g00270 Bhi-Chr6:6250007 Bhi06g00272 Bhi-Chr6:6250007 0 dispersed
Bhi06g00269 Bhi-Chr6:6250007 Bhi06g00270 Bhi-Chr6:6250007 0 tandem
Bhi06g00270 Bhi-Chr6:6250007 Bhi06g00271 Bhi-Chr6:6250007 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1304 PF00004 AAA 1.80E-19 CL0023 Bhi TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g00270 K02603 - csv:101214082 1427.92