Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g00287 TATTTTTAGGATATTTGTTTTGGACGTCATTCACTGGCTGCCACTGCAAATATTTTATTGGAGAGAGAGAGAGAATGGGATTAGCCTCCGCCGGAGCGCAGTTGATTTCCCTTCCACCAACGGGGAGCAGTAGCTGCCGCCGCCGCATCGGGACGCCATTTCAACTACCTTACTTCCGATTTACTTCTCCTCTCCCTTTTAGGAAATGCGGTAATAGGAGTGATTGGAAATGGAAGGGCAAGAGAGAGAAAAAGGGAGGTAAAGTGTGTTATAGCGTAGAGGGAGTGGAGGATGATGATGATGATGATGCTGCTTGTGAACTCGTTAATGGAATGGAGCTTTCAATTGGGGAACAACCTCATCATTCAATCCCTGCATATCTCTTTAAGGCAGTCAAGAACAATAATGGAACTGCCATTCTCCTCTTGTCCGATCTCTTTGCCTTTCAACATTCTTCCATTAGAGACTTTGCTTATCGTCTTGCTTGCAATGGCTTCAATGTCTTACTTCCAGATTTAATTCACGGAGATTCATGGAAGAAACAGTCTACAAAACGAGACATGCAGAGGATTGCAGAAGACATAGGAACAGTAACAAAATGGTTGGTCGACGAGTTTTCAGCAGCAGGCCTCTCGAGGAAGCTTGGGATCATGGGATTTGGGTATGGGGGAGGCCAAGTTATAGAAGTTCTAGCACGAGATGAGGGTGCCTGTTTCTGTATTGGAGCCTCCCTCTATGGTACTGAAGTAGATCCATCTCTTGCTACCAAAGTCAAGGTTCCTGTGTTACTCATCTCAGGGGACAATGATCCACTTTGTCCAGTGAGTGTCATGAAGGATTTGGAGAAAAGGATGGGAGAAGGTTCCAAGTTAGTGATATTTGGGGGAAGAGGCCATGACTTTGTTCACAACCCTAGATCTCCAGAAGAAGATGAAGATGCTGAGCAGGCTTTTCTAATGATAAGAAATTGGCTGCATCACGGATTGGTTGCAACTAATATTTAGCTAACTACCATAGCTAATTTGGTAATGAACGAAGTCAACCTGATTCTGATACCACTGCTACTAGGATTCCAAAATGCCCAAGACTGGGGCATGCCCACTTATACACAACTCAGCAATATGATGCAGTCATTGATAAACACATACTATCAGTTGGGATCCCTATGAGTACGTATTTTTCAGGCTAAAAATTGCTTTTCAATGATCCA 1210 43.88 MGLASAGAQLISLPPTGSSSCRRRIGTPFQLPYFRFTSPLPFRKCGNRSDWKWKGKREKKGGKVCYSVEGVEDDDDDDAACELVNGMELSIGEQPHHSIPAYLFKAVKNNNGTAILLLSDLFAFQHSSIRDFAYRLACNGFNVLLPDLIHGDSWKKQSTKRDMQRIAEDIGTVTKWLVDEFSAAGLSRKLGIMGFGYGGGQVIEVLARDEGACFCIGASLYGTEVDPSLATKVKVPVLLISGDNDPLCPVSVMKDLEKRMGEGSKLVIFGGRGHDFVHNPRSPEEDEDAEQAFLMIRNWLHHGLVATNI 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6357540 6359310 - XM_039034639.1 Bhi06g00287 36626

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g00287 309 PANTHER DIENELACTONE HYDROLASE 56 306 - -
Bhi06g00287 309 SUPERFAMILY alpha/beta-Hydrolases 96 302 IPR029058 -
Bhi06g00287 309 Pfam Dienelactone hydrolase family 100 302 IPR002925 GO:0016787
Bhi06g00287 309 PANTHER DIENELACTONE HYDROLASE FAMILY PROTEIN 56 306 - -
Bhi06g00287 309 Gene3D alpha/beta hydrolase 87 302 IPR029058 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g00287 K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] - csv:101210518 478.789
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g00287 Bhi-Chr6:6357540 Bhi12g00152 Bhi-Chr12:4611964 3.17E-06 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1541 . . . . . . . . . . . . . . . . . . . . . . . . Cla08g00018 Cam08g0012 Cec08g0248 Cco08g0059 Clacu08g0031 Cmu08g0027 Cre08g0012 . . . . . . . . . . . . . . . . . . . . . . . . . Bhi06g00287 . . . . . . . . . . . . . Lsi08g00012 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0012984 0 1 1 1 0 1 0 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 0 2 1 28
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi06g00287 Bhi_Chr06 FPKM 6.454708 5.862669 5.928148 5.298892 6.168212 7.634885 6.998698 2.966357 3.389345 3.128962