Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g00290 ATGACAGCTGGCGAAGGGCTCTGACAGTCTGTTCTTTGTTATCATTACAACGGCAAACAACACACATACCCCTCGCATCCTTTCTTCTTCTTCTTCTTCTTCTTTCCACTTCGCCTCTCCTCTTCACTATTAAGCCCTTCTTTCTTCTTTTCTCTGTTTCACTCACAAACAATACTCCTTTCTTCTTCTTCTTCTTCTTCTTCTAGTCATGGCTGAGGAAACCCAGAAGCCTGCTGCTGCCGAACCCCAGCCTTCTTCTCAACCTGTCCCGGAGGACCCTGCCCCTGCCCCGGCCCCTGCCCCGGAGAAGGAACTACCTGACCCTGCTCCTGCCAACCCTGATTCCGTGGAGGAAGTTGCAGAGGCGGAGAAGCCAAAAGCCGCCGAGGACTTTGAGAAGATCTCTCAGTCTGTTTCTTTCAAGGAGGAGACCAACGTCGTTGCTGAGCTTCCGGAGTCCCAGAGGAAGGCGCTGGCCGATCTTAAGCTTCTGATTCAGGAGGCTCTCAATAACCATGACTTCACTGCTCCTCTACCCCCTCCTCCGCTTAAGGAAGAAGACAAGCCGTCCGAGGAAAAGAAGGAAGACCCTGACAAGCCTGCTGAAGAGACTAAAATCGAAGACAAATCCGATGCTCCCAAAGAAGCTGTACCCGAGGAACAACCTCCCAAAGAAGTTGTGATCGAAGAGCCTCCCAAAACCGAACCACAACCAGAGACTGTGACGGTGACGGTGAAGGTGGAAGACACAATCACTCCTAGTCCCGCGCCCGAGACTTCGTTGGCTCCAAAACCGGAAGAGAAGGCGGCAGAGCCATCGACGGTGGTGGAGAAAGTGGCAGTTATCGACGAGGATGGTGCCAAGACGGTGGAAGCGATCGAGGAAACTGTAGTTGCCGTCTCGGCCCCGCAGCCGGAGGAACCAGCCCTGCCCAAGGAAGAGGCGAAGGCTGAGCCCGAAGCAGAAGCGGCAGAGCCTGTGCCGCCACCTCCACCAGAGGAGGTGTTCATCTGGGGAATTCCTCTCCTCGGTGACGAAAGGAGCGATGTGATTTTGTTGAAATTCCTCCGCGCCAGAGACTTCAAGGTGAAAGATGCTTTTACGATGATCAAGAACACGGTTCGTTGGCGAAAACAATTCGGCATCGAGGCTCTTCTGGACGAGGACTTGGGGAACCAGTGGGACAAAGTGGTGTTCTCCCATGGCGTCGACAGGGAAGGCCACCCAGTCTGCTACAACGTGTTCGGTGAGTTCGAGAACAAGGACTTGTATCAGATCACCTTCTCCGACGACGAAAAGAGCCTCAAATTCCTCCGATGGAGGATTCAGTTTCTGGAGAAGAGCATCAGAAAGCTCGACTTCAGCCCCAATGGCATCTCCACCATTGTTCAAGTCAACGACCTCAAAAACTCGCCTGGACTCACCAAGTGGGAGCTCAGAAACGCCACCAGGCGAGCTCTGCAACTCTTCCAAGACAATTATCCTGAATTCGCTGCCAAACAGGTGTTCATCAACGTGTCATGGTGGTACTTGGCCGTGAACAGGATGATCAGCCCCTTTTTCACTCAGAGAACAAAGAGCAAGTTTGTGTTCGCCGGACCATCCAAGACTGCCGAGACCCTATTCAAATACGTTGCTCCTGAACAAGTACCAATTCAGTATGGTGGATTAAGCAGGGAGGGCGAGCAAGAATTCTCCATTGAAGACCCTGTTACTGAAGTTTCCATAAAGGCAGGAACCAAACATACTGTTGAATTCCCAGTTTCTGAGCCAAGCCTTCTGGTTTGGGAATTGAGAGTTGTAGGATGGGATGTTAGCTATGGGGCAGAGTTCTCGCCGAGTGCTGAAGGTGGCTACACTGTGATTGTACAAAAGACAACGAAGCTTGGGCCAAGTGATGAACCAGTGATCTCCAACAGCTACAGGGTTGGTGAAGCTGGTAAAATTGTGCTCACCATTGACAATTTGAGCTCCAAGAAGAAGAAGATCTTGTTGTACAGATCCAAGACCAAACCCGTCTCTGATTAATGGAGCTGCAAAAACTTGATCAAATCTCCCATTTCAAATTGATGAACACAAAACTGCAGACACAATAATCAGGGTTCTTTATTTATGAATGATACAATGTTTTCTTCTTTTTCTCCTTGTTTCATTTGTTGAAAAATTAAAATCATATTTCTCCAATTTGGATAGTCTTATAAACAGGATTGGTGGGTGAGAGTTGGATTTCTTTTGTATGCCTTCTTTCTTTCCATGTTTGCTTGGGTGTTGTGATCTTTTGACGTTGGTGCTAAATTGGCAGGAGAGCTGTCTGAAATTGTCTGGACTCCCAGGAACGAGAGAGGGCTTTTGTTTGTTCTCTTGATAGTATTCTGTAAAATTTGTGTAAATTTGTTGTATTATTTAGTGTTACTCTCTTTCCTTCAATTTGTGTATTGGTTTATTTTTCGAAAGATTTGTTGCGTGGTATCTTTTTGATCATTCATGGTTGTTAATACAGTTGTATTTTCTCGGCA 2517 48.15 MAEETQKPAAAEPQPSSQPVPEDPAPAPAPAPEKELPDPAPANPDSVEEVAEAEKPKAAEDFEKISQSVSFKEETNVVAELPESQRKALADLKLLIQEALNNHDFTAPLPPPPLKEEDKPSEEKKEDPDKPAEETKIEDKSDAPKEAVPEEQPPKEVVIEEPPKTEPQPETVTVTVKVEDTITPSPAPETSLAPKPEEKAAEPSTVVEKVAVIDEDGAKTVEAIEETVVAVSAPQPEEPALPKEEAKAEPEAEAAEPVPPPPPEEVFIWGIPLLGDERSDVILLKFLRARDFKVKDAFTMIKNTVRWRKQFGIEALLDEDLGNQWDKVVFSHGVDREGHPVCYNVFGEFENKDLYQITFSDDEKSLKFLRWRIQFLEKSIRKLDFSPNGISTIVQVNDLKNSPGLTKWELRNATRRALQLFQDNYPEFAAKQVFINVSWWYLAVNRMISPFFTQRTKSKFVFAGPSKTAETLFKYVAPEQVPIQYGGLSREGEQEFSIEDPVTEVSIKAGTKHTVEFPVSEPSLLVWELRVVGWDVSYGAEFSPSAEGGYTVIVQKTTKLGPSDEPVISNSYRVGEAGKIVLTIDNLSSKKKKILLYRSKTKPVSD 606
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6433430 6436313 - XM_039034020.1 Bhi06g00290 36629

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g00290 606 CDD SEC14 323 488 IPR001251 -
Bhi06g00290 606 PANTHER PATELLIN-LIKE PROTEIN 1 606 - -
Bhi06g00290 606 Pfam CRAL/TRIO domain 327 487 IPR001251 -
Bhi06g00290 606 SMART CRAL_TRIO_N_2 279 304 IPR011074 -
Bhi06g00290 606 Pfam CRAL/TRIO, N-terminal domain 269 303 IPR011074 -
Bhi06g00290 606 SUPERFAMILY CRAL/TRIO domain 328 489 IPR036865 -
Bhi06g00290 606 MobiDBLite consensus disorder prediction 103 205 - -
Bhi06g00290 606 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 501 598 IPR036598 -
Bhi06g00290 606 SUPERFAMILY CRAL/TRIO N-terminal domain 69 320 IPR036273 -
Bhi06g00290 606 Gene3D GOLD domain 507 601 - -
Bhi06g00290 606 Gene3D - 271 506 IPR036865 -
Bhi06g00290 606 MobiDBLite consensus disorder prediction 115 163 - -
Bhi06g00290 606 MobiDBLite consensus disorder prediction 14 39 - -
Bhi06g00290 606 PANTHER PATELLIN-1 1 606 IPR044834 GO:0008289
Bhi06g00290 606 MobiDBLite consensus disorder prediction 1 83 - -
Bhi06g00290 606 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 318 493 IPR001251 -
Bhi06g00290 606 ProSiteProfiles GOLD domain profile. 495 601 IPR009038 -
Bhi06g00290 606 MobiDBLite consensus disorder prediction 233 262 - -
Bhi06g00290 606 MobiDBLite consensus disorder prediction 168 188 - -
Bhi06g00290 606 MobiDBLite consensus disorder prediction 48 68 - -
Bhi06g00290 606 SMART sec14_4 322 490 IPR001251 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g00290 - - K19996 csv:101210020 924.85
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g02773 Bhi-Chr3:71189307 Bhi06g00290 Bhi-Chr6:6433430 0 dispersed
Bhi04g02565 Bhi-Chr4:68905779 Bhi06g00290 Bhi-Chr6:6433430 4.60E-160 dispersed
Bhi06g00290 Bhi-Chr6:6433430 Bhi08g00971 Bhi-Chr8:31887017 2.64E-134 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1546 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Sed11g1710 . . . . . . . . Bhi06g00290 Tan10g2120 Cmetu03g2111 . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000709 2 3 3 2 2 3 4 3 3 3 3 3 4 2 3 4 3 7 4 3 3 3 4 3 3 3 3 3 3 4 96
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi06g00290 Bhi_Chr06 FPKM 2.826087 3.424579 4.411626 3.65036 2.986619 2.765481 3.232605 5.29557 4.875821 4.511324