Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g00295 GAGCAGAGGATAATGGGATTGATTGGGTTTCCTTTGGCTTTCATTCTCCAAAGTCCAAAAGAGCCCAGAGGAACAATCTGGTCCCTCGTCCCCTACGCTGTTGTTGTGAGTGACTGACTGACCCTTCGCATTTCCAAAGATAGAATTCGGGCGGAGTTTTCCTTTTCCTTTTCCTTTTCTTTTCCCTTTCCTTTCACTTCCAACAAATAAACCAACAAAAATATTATAAAAAACACAGCAGAAATCTCCTGCGCCACTCACTCCCAAGCAGATGCAATCGACAACTGGTGCTGGTGCTACTGGTAGTCGTAGCTCCGGCGGCGGCGGCGGCGCCGGCCTTGCACGGTTCCGCTCTGCCCCTGCCGCCTGGTTGGAAGCTCTTTTAGAGGACGACGAGGAGGACCCCCTCAAGCCCAGTCACTGCTTGACTCAGCTTCTCGCCGCCAACTCCTCTGACCTCGACTCCCCCGCAGATCAACCCTTGTTCGACCCCAATCCCTCCCCCGCCTTCCACAGGCAGAATAGCTCTCCCGCCGAGTTTCTCGCCGCCTCTGGAATTGGGGAAGGATTTTACACTGCCTATGCTCTCAATTCCTCTCCCACTCTCGACGTCTCTCCCACCTCCAAACGAGCTAGAGAAGTCGACGCCCAAAACTTCTCCCCCAAATTTTCACCTCAACTGAAAAGGGAAGGAAGTGGAGTTTCGAGTTTGATAGACATGGAAATGGAGAAATTATTGGAGGACTCTGTGCCCTGCCGGGTGAGAGCCAAGCGTGGCTGTGCCACGCATCCTCGGAGCATTGCTGAGAGGGTCCGTAGGACTAGAATTAGTGACAGAATAAGGAAGCTTCAGGAGGTTGTCCCCAACATGGATAAGCAAACAAACACCGCAGATATGTTAGAAGAAGCAGTAGAGTATGTCAAATTCCTTCAAAAGCAAATTCAGGAACTCACGGAGCATCAGCGCAGGTGCAAATGCATGGTCAAGGAATAACAGGTTGAAGGAAGAACACTACTCCAGCCTGCAGAAATCGCCCTTCCACGATTAGTGTAAATTAGTAGGTTTCTGGGGACTTGAAAGGTAGTAAAAAAGTAAGTGTTTTGGCTATAATATATTGTATTCTCTTTGGTTCTAAAGAAAATATCAACCTTGTAATGCATGCATTCATATATATTGCATTCGTACGCAATAAGCAGGTGTAACAAAATGTTGGGGGACTGCTCCTTTTTTTTTTTTTTTTTTTTAAATTTTATAATTAAATTTCCTTTTTGGGTTTTTTTGGGGGAAAAAAAACTTGTTGAATAGTACATTAGAACATTAGGTCTCTAGTTTAAGATACTTGTCCTGTGCAATTGTATTTCCAACATCCATCCAATATTATCAGGAGAAAGCTTTGGAATCGAAA 1406 46.02 MQSTTGAGATGSRSSGGGGGAGLARFRSAPAAWLEALLEDDEEDPLKPSHCLTQLLAANSSDLDSPADQPLFDPNPSPAFHRQNSSPAEFLAASGIGEGFYTAYALNSSPTLDVSPTSKRAREVDAQNFSPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE 240
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6532391 6537343 + XM_039035338.1 Bhi06g00295 36634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g00295 240 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 170 220 IPR011598 GO:0046983
Bhi06g00295 240 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 16 238 - -
Bhi06g00295 240 Coils Coil 210 230 - -
Bhi06g00295 240 SMART finulus 176 226 IPR011598 GO:0046983
Bhi06g00295 240 Pfam Helix-loop-helix DNA-binding domain 175 221 IPR011598 GO:0046983
Bhi06g00295 240 PANTHER TRANSCRIPTION FACTOR BHLH80 16 238 - -
Bhi06g00295 240 CDD bHLH_AtbHLH_like 175 227 IPR045239 -
Bhi06g00295 240 Gene3D - 171 240 IPR036638 GO:0046983
Bhi06g00295 240 MobiDBLite consensus disorder prediction 1 23 - -
Bhi06g00295 240 MobiDBLite consensus disorder prediction 112 136 - -
Bhi06g00295 240 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 173 237 IPR036638 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g00295 Bhi-Chr6:6532391 Bhi11g02664 Bhi-Chr11:71748448 4.36E-39 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1319 PF00010 HLH 2.90E-10 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g00295 - - csv:101209773 384.8