Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g00360 TCCTAAACCGCTACTTCACATACAAAATTTGATTCCATTTCATCTCCTTCTCCACTACTCTCATGACCCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTAATCCTCTCCCATGGTGGTTTCCCCTGCTTCTTTCTCCCCATGTCTTCTCTCCTCTCACCTTCTTCCATGTGGAGCGAGCTTTGCCTGAGACCAACAACGCCGACTCCACTCAATGGCACTGACGAAACCACCCCCGTCGAATGCTACGCCTGCACCCAAGTCGGCGTTCCGGCCTTCCATTCCACCAGCTGCGACCACGCGCACCAGCAACCAGAATGGGAAGCCTCCGCCGGTTCTTCCCTCGTTCCGATTCAACCCACAAAACCCTACCGGTCGGCGCCGCAACATCCTTCCGGTTGCTTCGGCACCGTTCTCGACCCTAGAACCAAACCGGTTCAAAGATGGAACCGGGTTCTGTTATTGGCCCGGGGAATGGCTCTGGCCGTTGATCCTCTTTACTTCTATGCTCTGTCTATCGGAAGAGGTGGCTCCCCTTGCCTGTACATGGATGGTGGGTTGGCCACCGTCGTCACCGTCCTTCGCACGTGCCTGGATTTCGTCCACTTGTGGCACGTGTGGCTTCAATTCCGTCTTGCCTACGTGTCTAAGGAGAGTATGGTGATTGGTTGTGGGAAACTCGTGTGGGATGCACGTGCTATTGCCTCTCATTACGTTCGTTCCTTCAGAGGCTTCTGGTTTGATGCCTTTGTTATCCTCCCTGTTCCTCAGATTGTTTATTGGTTGGTTTTACCAAAACTGATCAGAGAAGAGAAAATCAAACTCATAATGACAGTAATCTTATTGATGTTCTTGTTCCAATTCCTCCCAAAAGTTTACCACTCCATTATTTTAATGAGAAGAATGCAGAAGGTCACTGGATATATCTTTGGCACCATTTGGTGGGGTTTTGGCCTCAATCTCATTGCCTATTTCATTGCTTCTCATGTTGCTGGGGGTTGCTGGTATGTTCTTGCAATACAGCGAGTCGCTTCTTGCATCCAGCAACATTGTGAGAGAAACAAGTGCAACCTATCTCTGTCTTGCTCCGAGGAGGTGTGTTATCGGTTTCTCTCATCAGCAACAACGATCGGAAGTTCTTGTGGTCATAATTCGACTGCTACATTTAGGAAGCCACTTTGCTTAGATGTTAAAGGTCCATTCGCCTATGGCATCTACAAGTGGGCTCTTCCAGTCATTTCCAGCAATTCAGTTGCTGTCAAAATCCTTTATCCCATCTTTTGGGGATTAATGACTCTCAGCACCTTTGGCAATGATCTCGAGCCTACGAGTAATTGGTTGGAAGTATGCTTCAGTATTGGCACGGTCCTCAGTGGACTGCTGCTTTTCACTCTTTTGATTGGTAATATCCAGGTACTTCTGCACGCCGTCATGGCGAGGAGGCGGAAAATGCAGCTGAGATGTCGAGATTTGGAGTGGTGGATGAGGAGACGACAATTGCCATCTCGTTTGAGACAACGAGTACGACACTATGAACACCAGAGATGGGCAGCCATCGGCGGAGAAGATGAGATGGAACTAATTGACGATTTGCCCGAAGGTCTTCGAAGAGACATTAAACGTCATCTTTGTGTTGATCTAATCAGAAAGGTGCCTCTCTTCCAAAACCTGGAGGAGCTTATTCTCGACAACATATGTGATCGAGTCAAGCCACTTGTATTCTCCAAAGATGAAAAGATTATCAGAGAAGGTGATCCTGTTCCAAGGATGTTGTTCATAGTGTGTGGACGAGTAAAACGTAGCCAAAGCCTGAGCAAGGGCATGACAGCAACAAGTTTTATTGAACCAGGAGGATTTCTCGGTGATGAGCTGCTATCGTGGTGTCTTCGTCGTCCATTTCTGGAGAGACTTCCAGCTTCATCAGCTACATTTGTTTGCATTGAACCAACAGAAGCATTTGCCCTGAAAGCAGACCATCTGAAGTACATAACCGATCACTTCCGCTACAAATTTGCGAACGAGAGACTGAAGAGAACAGCAAGATTTTACTCTTCCAACTGGAGAACATGGGCTGCTGTGAACATTCAATTTGCTTGGCGTAGATACCGAAAGAGGATGAGACGTCCTGCGATAGCTGTAGTGGAAGATGGAAGCAGTGAACGTCGGCTTTTGCAGTATGCTGCAATGTTCATGTCATTCAGGCCACATGATCATCTTGAATAGTGAATAACTGCTATTGCCTCCAACAATTCTTGAATTCTTTCTTAAAAAAATCCATTGATTCATATCATTTTCCATATGATTCGATACCCATCTCCCAAGAAAGACCTGGAATTGGAAATTAACGTGGAAACTGTGTTTTCCCATTTGGTTGGAAAATATTTTAGTGTCAAGAGTGAGATGAAGTGTCTATTTTCTCTCTTTGATGCCAGATCATGTTTCTCAAGAAAGATATGGAATAGAAAATGAATGTAATCTCAAGAATAAGATGTATTTGTTTGAGTGTTTTTTAATTGGAAATGAGTGATGAAATTATGTA 2539 45.57 MSSLLSPSSMWSELCLRPTTPTPLNGTDETTPVECYACTQVGVPAFHSTSCDHAHQQPEWEASAGSSLVPIQPTKPYRSAPQHPSGCFGTVLDPRTKPVQRWNRVLLLARGMALAVDPLYFYALSIGRGGSPCLYMDGGLATVVTVLRTCLDFVHLWHVWLQFRLAYVSKESMVIGCGKLVWDARAIASHYVRSFRGFWFDAFVILPVPQIVYWLVLPKLIREEKIKLIMTVILLMFLFQFLPKVYHSIILMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCIQQHCERNKCNLSLSCSEEVCYRFLSSATTIGSSCGHNSTATFRKPLCLDVKGPFAYGIYKWALPVISSNSVAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVCFSIGTVLSGLLLFTLLIGNIQVLLHAVMARRRKMQLRCRDLEWWMRRRQLPSRLRQRVRHYEHQRWAAIGGEDEMELIDDLPEGLRRDIKRHLCVDLIRKVPLFQNLEELILDNICDRVKPLVFSKDEKIIREGDPVPRMLFIVCGRVKRSQSLSKGMTATSFIEPGGFLGDELLSWCLRRPFLERLPASSATFVCIEPTEAFALKADHLKYITDHFRYKFANERLKRTARFYSSNWRTWAAVNIQFAWRRYRKRMRRPAIAVVEDGSSERRLLQYAAMFMSFRPHDHLE 693
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7880339 7886259 + XM_039034135.1 Bhi06g00360 36699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g00360 693 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 2-LIKE 39 693 - -
Bhi06g00360 693 SUPERFAMILY cAMP-binding domain-like 433 620 IPR018490 -
Bhi06g00360 693 CDD CAP_ED 506 616 IPR000595 -
Bhi06g00360 693 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 39 693 - -
Bhi06g00360 693 Gene3D Jelly Rolls 504 622 IPR014710 -
Bhi06g00360 693 SMART cnmp_10 506 631 IPR000595 -
Bhi06g00360 693 Pfam Ion transport protein 102 425 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bhi06g00360 693 Pfam Cyclic nucleotide-binding domain 526 614 IPR000595 -
Bhi06g00360 693 Gene3D Helix hairpin bin 432 497 - -
Bhi06g00360 693 ProSiteProfiles cAMP/cGMP binding motif profile. 506 585 IPR000595 -
Bhi06g00360 693 SUPERFAMILY Voltage-gated potassium channels 94 428 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02574 Bhi-Chr1:63232429 Bhi06g00360 Bhi-Chr6:7880339 0 dispersed
Bhi06g00360 Bhi-Chr6:7880339 Bhi02g00814 Bhi-Chr2:16679236 4.73E-131 dispersed
Bhi06g00360 Bhi-Chr6:7880339 Bhi12g00625 Bhi-Chr12:19116777 1.89E-129 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g00360 K05391 - csv:101203560 1308.89