Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g00400 ATACTCTGATTTTTATTATCAACAACACCCTTTAGTTTTCTCTCATTTCTCTTTCCTTTCTTCTTCTTCCTTCTTCTTCTTCTTCATCATTTGTTATGGGTAAGGATCTTAATTTTTTTACACAGAGGTTAATGTTATGCTCAATTTTATTTGTAGTTCTGCTTGTTTAATTGTTAATGTTTAGAGAGGGGTTCTTTTTTTTGTGTGGTTTGAGAGATAGATAGATAGCCATGGATTTAGCCCCAGCTCCCATCACTACTAGTAGTAATAACAACACCAAATCTCCCGACGCCGACTCCGATACTCCGACAAACATTCCGCCCTCCTCCGTCAAATCTCTCCCCTTCACCAACGGCGTTCTCAAGCGCCACCACCACCGGCAACCGACGGTGGCTGTTTCTTATAAAGAATGTCTTAAAAATCACGCCGCCAGTTTAGGAGCTCACGCTTTGGATGGATGTGGCGAATTTATGCCTTCCCCTTCTGCTACCCCCACTGATCCCACTTCCCTTAAATGCGCCGCATGCGGTTGTCACCGGAATTTCCACCGCCGTGACCCCGAAGATCCAATTTCAACTTTAGCTATAAATACCGCGCCGACTCATGTCATCGAGTATCAGCCTCACCACCGTCATCACCCTCCACCGCCACCGGGGAATCGAAGCCCGAATTCTGCATCTCCTCCGCCGATCTCGTCGTCGTATTACCCATCTGCGCCGCATATGCTACTGGCGCTTTCGGCTGGGTTGTCGGGTCGTCCGCCGGAAAATAATATACAGGGGAATAATTCTGTTCTGACGGTGAGTCCGAATGCCCGCAAACGGTTTCGGACGAAATTCAGTAACGAACAGAAGGAAAAAATGCTGGATTTCGCAGAACGAGTTGGATGGAAAATGCAGAAAAGAGATGAAGATTTGGTTCGAGATTTTTGTAATCAAGTAGGAGTTGAAAGAGGAGTTCTCAAAGTATGGATGCATAACAACAAGAACACCATGGGAAAAAAGCCCGACTCCAATGGCATCACCGCCACCACCGCCGCCGTCAATGAACCAGATGGGGGCTTACATATGCATATTGGCTCAAATGGGTCATCTTCTTCTTCTTGATCTACCACTCCCCAAGTAATTAATTAATAAAAACTCCATGATCATCCCCTGATACGGAAATCCAAGCTAGGTAGTTCTGTTTTTTTTTTTTTTTTTGAAACTTTTAATTTTTAGTTTAGTGTTGAATTAAGAGATGACCAGTGAGAAGATCATAACCCTCTTTGGAGGTTTCTATAACATGAAATTATTAATTAAGAACAGAGGAGAGAGGAGAAAGGAAAGCATTAATCATTAATCCTTATTGATTACTTCTCTTAATTTCTTTCCTCATCTCTATTAATTACTTTATGAATTTTGGGTTAAATGGATTAAGATTAAGATTACGCGGGTTGATGTTATTCTTTGGAGATTTGGAATAAATAAATCTAATTTAATCTAA 1485 41.95 MDLAPAPITTSSNNNTKSPDADSDTPTNIPPSSVKSLPFTNGVLKRHHHRQPTVAVSYKECLKNHAASLGAHALDGCGEFMPSPSATPTDPTSLKCAACGCHRNFHRRDPEDPISTLAINTAPTHVIEYQPHHRHHPPPPPGNRSPNSASPPPISSSYYPSAPHMLLALSAGLSGRPPENNIQGNNSVLTVSPNARKRFRTKFSNEQKEKMLDFAERVGWKMQKRDEDLVRDFCNQVGVERGVLKVWMHNNKNTMGKKPDSNGITATTAAVNEPDGGLHMHIGSNGSSSSS 291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8781289 8782773 + XM_039035248.1 Bhi06g00400 36739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g00400 291 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 9 269 - -
Bhi06g00400 291 PANTHER HOMEOBOX DOMAIN, ZF-HD CLASS PROTEIN 9 269 - -
Bhi06g00400 291 MobiDBLite consensus disorder prediction 130 157 - -
Bhi06g00400 291 Gene3D - 184 257 - -
Bhi06g00400 291 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 58 109 IPR006456 -
Bhi06g00400 291 SUPERFAMILY Homeodomain-like 185 257 IPR009057 -
Bhi06g00400 291 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 196 253 IPR006455 -
Bhi06g00400 291 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 58 109 IPR006456 -
Bhi06g00400 291 MobiDBLite consensus disorder prediction 1 39 - -
Bhi06g00400 291 Pfam ZF-HD protein dimerisation region 56 110 IPR006456 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00810 Bhi-Chr4:20322896 Bhi06g00400 Bhi-Chr6:8781289 1.64E-50 dispersed
Bhi06g00400 Bhi-Chr6:8781289 Bhi11g00836 Bhi-Chr11:23129785 7.69E-45 dispersed
Bhi11g03003 Bhi-Chr11:81564559 Bhi06g00400 Bhi-Chr6:8781289 3.23E-98 wgd
Bhi06g00400 Bhi-Chr6:8781289 Bhi07g01569 Bhi-Chr7:44900340 1.56E-57 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1327 PF04770 ZF-HD_dimer 1.10E-28 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g00400 - - csv:101213548 440.654