Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g00416 TTTTTTTTTCCCTCTCTTTACCTAAAATTCGCTGTCTTTCAGACTCTTCACCCATTTTCCCACACTTCTAGCCATGAGAGTGAGAGCCAATACACCACTCTCTAACCCATTTCCTTTTCTTCTTCTTCTTCTTCTTTAATCAAATTCTTCTTCTATTTCTTCTCATCTTTCTCTCTTTGAATCTCAATCCAAATCTTAACACACACCCACATAATATTGTGAGATCTAGCATGCATTGCCATTCCTATGGCTTCCCCTCACCATTCCCATAGCTTCATGTTCCAATCCCGCCCCGCCGATCACCATGAATACGTCCCCTCCGCCTCCTTTAACGCCATCCCTTCATGCCCTCCTCACCTCTACTTTCACGATGGGGTTGTTCCGGTGATGATGAAGAGATCGATGTCGTTTTCAGGAGTCGAGAATGGGTGTGAGGAAGTGAATGGCGACGAGGGGTTATCGGACGATGGATTGGCGTTGGGAGAGAAGAAGAAGCGATTAAATTTAGAGCAAGTGAAAGCATTGGAGAAAAGTTTTGAGTTAGGGAATAAGCTTGAGCCAGAGAGGAAAATGCAGCTAGCCAAAGCTTTGGGGTTGCAGCCAAGACAAATTGCTATTTGGTTTCAGAATAGAAGAGCCAGATGGAAAACCAAACAATTGGAGAGAGATTACGAGGTGTTGAAGAAACAGTTTGAAGCTCTAAAAGCTGACAATGATGTACTTCAAGCTCAAAATACCAAACTCCATGCAGAGTTATTAGCATTAAAGACCAAAGACTCCGGCGAGGTGGTGNNGGGCGGCGCCGCCACCATGAACTTAAAGAAAGAAAACGAAGAGTGTTGGAGCAGCGACAACAGTTGCGACATCAACCTCGACATCTCAAAGACACAAGCATCGATAGGTGGCGGCAGTGGTGGCGGCGGAAGAGGATGTTCTCAACCAGGAATAATCAAAGATCTTTTCCCATCCGCGGCATTCCGATCCGCCGCCATAACGCAGCTGCTTCAACACGGGTCGTCAAGATCAACGGTGGATCATCCTCAAGTGATCCAAGAAGAAAGCTTCTCTCAAATGTTCAATGGCATTGAAGAACAACAACAAACTGCAGCAGCAGCAGCAGCAGCAGCTGGGTTTTGGCCATGGAATTCAGATCAAAATTCCCATTTTCATTAATCCATCATTACACAGTTAATTTTTTTTCTCCCATATAAAACAGTTAAAATTTTAAATGAATTAGTTCAGTTGTAATATTATTATTGGGAATTTGGGATTATAATTAAATTAAATGATACGCATTTGT 1300 43.15 MASPHHSHSFMFQSRPADHHEYVPSASFNAIPSCPPHLYFHDGVVPVMMKRSMSFSGVENGCEEVNGDEGLSDDGLALGEKKKRLNLEQVKALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLERDYEVLKKQFEALKADNDVLQAQNTKLHAELLALKTKDSGEVVXGGAATMNLKKENEECWSSDNSCDINLDISKTQASIGGGSGGGGRGCSQPGIIKDLFPSAAFRSAAITQLLQHGSSRSTVDHPQVIQEESFSQMFNGIEEQQQTAAAAAAAAGFWPWNSDQNSHFH 308
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9406250 9409224 + XM_039034914.1 Bhi06g00416 36755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g00416 308 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT7 1 308 - -
Bhi06g00416 308 PRINTS Lambda-repressor HTH signature 107 116 IPR000047 GO:0003677
Bhi06g00416 308 PRINTS Lambda-repressor HTH signature 116 132 IPR000047 GO:0003677
Bhi06g00416 308 ProSitePatterns 'Homeobox' domain signature. 111 134 IPR017970 GO:0000981|GO:0006355
Bhi06g00416 308 Coils Coil 128 169 - -
Bhi06g00416 308 SUPERFAMILY Homeodomain-like 79 138 IPR009057 -
Bhi06g00416 308 CDD homeodomain 81 137 IPR001356 GO:0003677
Bhi06g00416 308 Pfam Homeobox associated leucine zipper 136 176 IPR003106 GO:0006355|GO:0043565
Bhi06g00416 308 ProSiteProfiles 'Homeobox' domain profile. 80 136 IPR001356 GO:0003677
Bhi06g00416 308 SMART HOX_1 79 140 IPR001356 GO:0003677
Bhi06g00416 308 Pfam Homeodomain 81 134 IPR001356 GO:0003677
Bhi06g00416 308 Gene3D - 77 144 - -
Bhi06g00416 308 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 308 IPR045224 GO:0003700
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g00416 Bhi-Chr6:9406250 Bhi11g00839 Bhi-Chr11:23449829 9.71E-40 dispersed
Bhi06g00416 Bhi-Chr6:9406250 Bhi07g01589 Bhi-Chr7:45297549 1.05E-80 wgd
Bhi06g00416 Bhi-Chr6:9406250 Bhi08g01417 Bhi-Chr8:41915462 1.41E-38 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1331 PF00046 Homeodomain 2.90E-15 CL0123 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g00416 K09338 - csv:101212093 544.658