Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g00478 AATATTCTTTAGGCTTATTCCACAAAAGTCAAAATCATATGGTCGTAAATCATTTAAAAAAATATGTGAACATAAAACATTAAATTGGAGCTTCTTCCATGGCAGAGTATTGAAAGTTAATTAACCAATGGGGATTGGCATTAGCATATTCTATTTTATCCCAAAACACTCAGATTTTTCTTCTACACTTACTTGGGATTTACTTAACTTTACTCTTTCTCGATTCCGCTGATATTCTCAAACCCCAAAATCTCTCTCTCCCTTCTTCTCTCTTTGATTCGATTCTGTTGAGCCCTCCACGGACTCAGTCCACTGTACACCGCTCTTCTTCAGCTTTCTCAGCCGCTCTTACCTTACCGGACTTCCTTTCTCTGCACAAATCATGGAGCTTCAACAACAATTCATGGAGCCCTTTGATTGACATCCTTTTTCTTCTTAAAAGGGTTTTTTTTCCTCTTTGAATTCTGAATCTGAGATTCGAAAATGGAGTTTCAGGAGGGTTTGATGAAGTTTATGGTTCATAGACATATTAAACCCAACTGGGTTTTGGAGAAGGATTCTCCATCTGTTGCAGTTTCGGAGATAACTAATAGTCCTCGACGGAAATGGCGGATTTTCAGTCGGTCTTCTTCTTCCCCATTTCCGTCCAAACCCCAATTGAAGGAAATACCCAAAGAATTGCTTTGTCCGATTACTGGGTCTTTAATGGCGGACCCTGTAATTGTCTCCTCTGGTCATACTTTTGAAGCTGCTTGTGTTCAGGTTTGTAAAGATTTAGGGTTGAATCCGACTTTGTTAGATGGTTCGAAACCGGATTTCTCCTCTGTTATCCCAAATCTGGCTCTTAAATCCGCCATTTTCAATTGGTGTAAAAATTCCTCTTCTGAACCTCCTAAACCGCTCGATTTCTCCTCTGCTGAAAAGCTCGTTCGAAAATTCATGGCGGCTCACAGTAAAAGCGATGAGGAATTGATTCAAGGGATTGCTGAGAATCCTGTGGTCCGATTCAACCATGCCGCCACTGAAGTCACTCGTCGGAGCTCTCATTTCCACTCGAGCTCCGATGAATCTGTAAGCGCCGCCGTTCCTACTCTGCCTCTTCCTCTTACGACTCGGCCGAGTTGCTGTTCTTCGTCTTCTTCCTCTGACGTCGAGATCATTGGTACTCTGAACTTGCCTGAAGAAGAAGAGATCATAGCGAAGCTTAAAAGTTCTCAGGTTATTGAGATTGAAGAGGCTGTGACTACGCTGAGAAAAATCACAAGAACTCGAGAGGACAGCAGGGTTCATCTCTGTTCTCCTTTGGTTCTCTCCGCTCTGCGATCTCTCATCGTCTCAAGGTACACTGGCGTTCAAGTGAATGCAGTTGCAGCGCTTGTAAATCTATCTTTAGAGAATGTGAACAAGGTCAAGATCGTACGGTCGGGGATTCTCCCTAATTTGATCGATGTTCTGAAAGGGGGATCGCCGGAGGTTCAGGAACATGCTGCCGGCGCCATTTTCAGCTTAGCTCTCGAGGACGACAACAAGACGGCAATCGGCGTATTGGGTGCTCTGCCACCATTGATACGGCTGTTGGTATCCGACTCGGAGCAAACTCGGCACGACTCAGCTCTTGCTCTTTACCACTTATCACACGTTCAGAGCAACCGTTCGAAGCTTGTGAAACTTGGGTCGGTGCCGGTTTTTCTCGGGATGGTGAAATCCCGCCACATGGCCGGCTGTATTTTGCTGATTTTGTGTAACATAGCAGCTTGTTTTGAGGGCCGGGCGGCGTTATTGGACTCTGGTGCGGTGGAGTGTTTGGTGGGGATGTTGAGGGAGAACGAGTTAGACTCTGAATCGACTCGGGAGAGTTGTGTGGCGGTTCTGTTTGGACTGAGTTACGGCGGTTTGAGGTTCAAAGGTCTGGCAAAAACCGCCGGAGCAATGGATGTTTTCATGGCGATCGAGAAAAATGGAACTGAGAGATCAAAAGAGAAGGTGAAGAGAATCATTGAGTATATGAAAGCCAGAGATGAGGAAGCTGAGGACGTGAATTGGGAGGAATTGCTCGACTCAGGTTGTTTCGGCAGCCGAACTCGGTGTCGACTGGGTGCTGGAATGGACAGATCCACCGCAAACTCGTCTGAGTTCTGAATAGAACTCATTTGAATCTGTAAACTTGGGATTTTTTTTTTCTTTTTCGTTTATCATTTGGGTTGTGAATATTAGTGAACAACAAACCCCTTTTGATTTGATTTGATTTTTAACTCTGTTTTTTTCCTTCATCTTCATCTTCATCTGTTTCCTTTTTTCTCTTTTCCTGGTGAAGATGCCAAATAAAAGCCTTCTAAAGAAGCGACCTCAAAATTTTGTATTGTGTAATTTCTGTAATTTGTGTATTGTGATTCATTACAATCTTCATCTTTACCA 2415 43.85 MEFQEGLMKFMVHRHIKPNWVLEKDSPSVAVSEITNSPRRKWRIFSRSSSSPFPSKPQLKEIPKELLCPITGSLMADPVIVSSGHTFEAACVQVCKDLGLNPTLLDGSKPDFSSVIPNLALKSAIFNWCKNSSSEPPKPLDFSSAEKLVRKFMAAHSKSDEELIQGIAENPVVRFNHAATEVTRRSSHFHSSSDESVSAAVPTLPLPLTTRPSCCSSSSSSDVEIIGTLNLPEEEEIIAKLKSSQVIEIEEAVTTLRKITRTREDSRVHLCSPLVLSALRSLIVSRYTGVQVNAVAALVNLSLENVNKVKIVRSGILPNLIDVLKGGSPEVQEHAAGAIFSLALEDDNKTAIGVLGALPPLIRLLVSDSEQTRHDSALALYHLSHVQSNRSKLVKLGSVPVFLGMVKSRHMAGCILLILCNIAACFEGRAALLDSGAVECLVGMLRENELDSESTRESCVAVLFGLSYGGLRFKGLAKTAGAMDVFMAIEKNGTERSKEKVKRIIEYMKARDEEAEDVNWEELLDSGCFGSRTRCRLGAGMDRSTANSSEF 551
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 10899300 10901714 + XM_039033227.1 Bhi06g00478 36817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g00478 551 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 356 398 IPR000225 GO:0005515
Bhi06g00478 551 Gene3D - 232 507 IPR011989 -
Bhi06g00478 551 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 315 352 IPR000225 GO:0005515
Bhi06g00478 551 ProSiteProfiles U-box domain profile. 61 135 IPR003613 GO:0004842|GO:0016567
Bhi06g00478 551 SUPERFAMILY RING/U-box 56 136 - -
Bhi06g00478 551 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 61 134 IPR013083 -
Bhi06g00478 551 SUPERFAMILY ARM repeat 237 488 IPR016024 -
Bhi06g00478 551 Pfam Armadillo/beta-catenin-like repeat 305 343 IPR000225 GO:0005515
Bhi06g00478 551 Pfam Armadillo/beta-catenin-like repeat 346 384 IPR000225 GO:0005515
Bhi06g00478 551 SMART Ubox_2 65 128 IPR003613 GO:0004842|GO:0016567
Bhi06g00478 551 SMART arm_5 263 303 IPR000225 GO:0005515
Bhi06g00478 551 SMART arm_5 304 344 IPR000225 GO:0005515
Bhi06g00478 551 SMART arm_5 345 385 IPR000225 GO:0005515
Bhi06g00478 551 SMART arm_5 425 468 IPR000225 GO:0005515
Bhi06g00478 551 Pfam U-box domain 62 132 IPR003613 GO:0004842|GO:0016567
Bhi06g00478 551 CDD RING-Ubox 67 102 - -
Bhi06g00478 551 PANTHER U BOX DOMAIN-CONTAINING 39 539 - -
Bhi06g00478 551 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 38 39 539 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00395 Bhi-Chr2:7520726 Bhi06g00478 Bhi-Chr6:10899300 3.76E-171 dispersed
Bhi06g00478 Bhi-Chr6:10899300 Bhi10g02116 Bhi-Chr10:53247366 2.71E-10 dispersed
Bhi06g00478 Bhi-Chr6:10899300 Bhi08g01455 Bhi-Chr8:42703895 3.96E-150 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g00478 - - cmax:111489531 926.776