Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g00488 GTAACAATGAATTTGCACAATCATCTTTTATAAATAGACTTAAAATATAAAGCCATTGAAGTTAGCAAGGAAGTTTTCAGTTTTGAGAAAGATGGCGGTAAGCTTAATGGAAGGAATTCTTCCATTTCCGGCGATGATGGCGATGGAGTGTATCAACGTCGGTCTAAACACTCTTTTCAAAGCCGCCACCGCCGCCGGCATGAGCCACCACGTGTTCGTCGTTTATTCTTACTCTTTCGCCGCCCTTCTCCTCCTCCCTTCCCCGTTCATCTCTCGCCGATCTACTCGTCTTCCGCCGCTCAATTACTCTGTAATTTCAAAGATTGCTCTGCTTGGACTCATCGGTTCTTGTTCGCAGATTATGGGATACACAGGAATCAATTACAGTTCTCCAACGCTTGCTTCCGCCATCAGCAACCTTGTTCCTGCTTTCACTTTCATCCTTGCCATCATTTTCAGGATGGAGAAAGTGGTATTGAAGAGCAATAGCAGTCAAGCAAAAGTGGTGGGCACCATAATATCAATATCAGGGGCATTTGTGGTAACTTTTTACAAGGGTCCAAGAATCATATTATCTTCAGCACCCATTTCTCTTTCACTTCATCACCATCCACAACTGTCCTCTTTAGATTCTAATTGGGTCATTGGTAGCCTTCTCTTGACTGCTGAATATATCTTGGTTCCACTTTGGTACATTGTTCAGACAAAAATAATGAAGGAATACCCAGAAGAGGCAACAGTGGTCTTCTTCTACAACTTAACTGTGGCCATTATAGCTGCAGTTGTAGGTGCGATTTTAGAGACAGATCCAAGTGCTTGGATTTTGAGGCAAAATACAGCATTGGCCTCTGTTTTATGCTCTGGACTTTTTGGATCATGTTTAAACAATACAGTTCATACATGGGCACTCCGCTTGAAAGGGCCGGTGTTCGTAGCAATGTTTAAGCCGCTGTCGATCGTCGTCGCAATCGTAATGGGTGTTCTGTTTCTTGGTGATTCTCTACATCTTGGAAGTCTTATTGGAGCATCCATAATATCCATAGGGTTTTATACTGTAATGTGGGGAAAAGCAAAAGAAGAAATGGGTGTTGATGAAGAAAAAGAAGAAGGCCATAGCCATAATCTTAACAAGGAATCACATGAAGATCAGAGAGTACCTCTTCTTGGAACCTACAACACACAAAGATACAATGCAGATCATGTATAAGCAAAGCCAAGAAAATGATTGATGATCCAACTTTTATTTACCTTCAATCTATGGCCATGGCTATGAATATTTCTAAGGATGGGAAGGAAATTGTACAATTTGTTTGTGGTTAGAGCATGCCATAGGGTAGTAAAGATTTTTAACACTTTTCATTTCCCAATGTATCAATGGAAAGGTTAATTTGTATGTACTCTAAATTTCAAATGGCTTCAAATTATCTATGGACAGGATTGATACAACTTTTATTTGCCTTCAAGCTATGGCTATGGCCAAGCATGGGAGGATGAATTGTAAAATTTGTTTGTGGTCAGAACATGTCTTAGGGTTGTAAACATTTTTTTTACACTTTTGACCATGTAACAATGAAACATTAGTTTTCTATGTA 1592 39.95 MAVSLMEGILPFPAMMAMECINVGLNTLFKAATAAGMSHHVFVVYSYSFAALLLLPSPFISRRSTRLPPLNYSVISKIALLGLIGSCSQIMGYTGINYSSPTLASAISNLVPAFTFILAIIFRMEKVVLKSNSSQAKVVGTIISISGAFVVTFYKGPRIILSSAPISLSLHHHPQLSSLDSNWVIGSLLLTAEYILVPLWYIVQTKIMKEYPEEATVVFFYNLTVAIIAAVVGAILETDPSAWILRQNTALASVLCSGLFGSCLNNTVHTWALRLKGPVFVAMFKPLSIVVAIVMGVLFLGDSLHLGSLIGASIISIGFYTVMWGKAKEEMGVDEEKEEGHSHNLNKESHEDQRVPLLGTYNTQRYNADHV 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 11046239 11051760 - XM_039034207.1 Bhi06g00488 36827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g00488 371 PANTHER WAT1-RELATED PROTEIN 9 345 IPR030184 GO:0016021|GO:0022857
Bhi06g00488 371 PANTHER WAT1-RELATED PROTEIN 9 345 - -
Bhi06g00488 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 155 - -
Bhi06g00488 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 225 327 - -
Bhi06g00488 371 Pfam EamA-like transporter family 23 152 IPR000620 GO:0016020|GO:0016021
Bhi06g00488 371 Pfam EamA-like transporter family 196 323 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g00488 Bhi-Chr6:11046239 Bhi11g03090 Bhi-Chr11:83789991 4.17E-98 dispersed
Bhi06g00488 Bhi-Chr6:11046239 Bhi06g00489 Bhi-Chr6:11061510 7.40E-79 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g00488 - - csv:101208880 620.157