Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g00500 TACCCGCTGATAACAACCTCCACAGAGGTTCATAACAGCATCGTCGAATCCATTCCGCCGGGGACTCTGATTTTCCGATCTCCGGAGAGGTTTTCGAGACTGACGAAGAGCTGGGTAATAACAGAGCTGGTGGTGTGATGGGGTTTTGTATTTCTCCATTGGGAACACCGGCTAGGTTACTTTGGAGCACCAGCTTCTTCCGCCACAAGCTTATGATTTTCTAATTTTCAGCCGTAGACGCTGAAAATACCAAACCCCATCTATTTCCTTTCTTGTTTTAATAAAGATCTCCCACGATTTCGTGCGCCGCCGCCGTAAATCGCCGGTGATCCCTTGCTAACGATTCCCGTTTCAGATTTAAGAGAATAATTAATGATGTCGGACGGTTGGATCTTTAACCGGTCTCCAGGTCATGCCAACATGTTGTTTTTTGGAAGTAGTGATTCCATCCTTCGAGGACCAAGTTTCACGATGGGGATGGAGGAAACTTCAAAGAGGCAGCCCTTTTTCAGCTCTCCGGATGACCTGTTCGACGATGACTACTACGATGACCAGCCACCTGAGAAGAAGCGCCGGTTAACTCAAGAGCAGGTGCATCTGCTGGAGATTAGCTTTGAGTCAGAAAACAAACTGGAGCCAGAGCGCAAGACTGAGCTGGCAAAGAAGCTGGGTCTGCAGCCAAGGCAAGTGGCTGTGTGGTTTCAAAACCGCCGAGCTCGATGGAAGACAAAGCAGCTTGAAAGGGACTATGATCTTCTCAAATCTTCATATGATTCCTTTCGTTCTAGCTACGACTTTATTGCTAAGGAGAATGAAAGGCTCAAAGCCGAGGTAGCTTCTTTAACTGAGAAACTTCAAGCTAAAGAAGTGGTTGAATCATCGTTTCACGCTAAGAATCCCGAGCCATTTCTGGAGGATCAACTCCTTGTTCCTGTTGTGCAACAGAGCATTAAGATTGAAGACCACCATAGTTGCAGGAGCAATGGAAGCGCTGTGCTGGACGAGGACGGTCCTCAACTCTTAGACAGTGGGGATTCTTACCTCCTGAGCAATGACTATGATGGCTGTGTTTTGCCAGTTTTTGGAGTGAACTCAGAGGAGGAAGATGGGAGTGACGACGGTCAGGGTTACTTCTCGGATGTTTATACAACAGCTGATCAGCAGAGTCACGAGGGAGAGCCTTTGACCTGGTGGGACTGGACGTCGTAAATGCATGTTCGAATCATCTCGATATTTAGTAGTGGAACTATAATATGAAGTTTAATGTATGATACAAATGAATAAATATAGTAGTGTGAACATTACTTGGTTTGGAATGAATGTTTGTGTATGGATGTAACTTATATCTTGTACTGTTATATTA 1363 45.56 MMSDGWIFNRSPGHANMLFFGSSDSILRGPSFTMGMEETSKRQPFFSSPDDLFDDDYYDDQPPEKKRRLTQEQVHLLEISFESENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSSYDSFRSSYDFIAKENERLKAEVASLTEKLQAKEVVESSFHAKNPEPFLEDQLLVPVVQQSIKIEDHHSCRSNGSAVLDEDGPQLLDSGDSYLLSNDYDGCVLPVFGVNSEEEDGSDDGQGYFSDVYTTADQQSHEGEPLTWWDWTS 278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 11282328 11284996 - XM_039035069.1 Bhi06g00500 36839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g00500 278 SUPERFAMILY Homeodomain-like 48 122 IPR009057 -
Bhi06g00500 278 ProSitePatterns 'Homeobox' domain signature. 95 118 IPR017970 GO:0000981|GO:0006355
Bhi06g00500 278 Gene3D - 58 126 - -
Bhi06g00500 278 PRINTS Lambda-repressor HTH signature 91 100 IPR000047 GO:0003677
Bhi06g00500 278 PRINTS Lambda-repressor HTH signature 100 116 IPR000047 GO:0003677
Bhi06g00500 278 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 3 261 IPR045224 GO:0003700
Bhi06g00500 278 Coils Coil 140 167 - -
Bhi06g00500 278 CDD homeodomain 65 121 IPR001356 GO:0003677
Bhi06g00500 278 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT5 3 261 - -
Bhi06g00500 278 ProSiteProfiles 'Homeobox' domain profile. 60 120 IPR001356 GO:0003677
Bhi06g00500 278 Pfam Homeobox associated leucine zipper 120 162 IPR003106 GO:0006355|GO:0043565
Bhi06g00500 278 Pfam Homeodomain 65 118 IPR001356 GO:0003677
Bhi06g00500 278 SMART HOX_1 63 124 IPR001356 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01269 Bhi-Chr3:26265318 Bhi06g00500 Bhi-Chr6:11282328 2.80E-23 dispersed
Bhi06g00500 Bhi-Chr6:11282328 Bhi11g01661 Bhi-Chr11:47828121 4.26E-81 dispersed
Bhi06g00499 Bhi-Chr6:11282328 Bhi06g00500 Bhi-Chr6:11282328 0 tandem
Bhi06g00500 Bhi-Chr6:11282328 Bhi06g00501 Bhi-Chr6:11282328 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1334 PF00046 Homeodomain 3.40E-17 CL0123 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g00500 K09338 - csv:101210106 508.449