Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi06g00551 | TTTTGCAGGCCCCCCCTCTTCTCTTATTTCATCTCTTCTAGGGTTTCTTCCTTTTGTTTTTTCATCTTTATATTTACCTTTTAAATTAATTCTTCCAATTAATTCCCTCTTGGAAATATTTTTTATATGTGTCCTTTTTTCCCCCTTCTCTTCTCCCTCTAATCTTAAGCTTCTTCAAACCATCTTGTGGAGAAAAAAGCATCTGATCAAGGAAGAAAAAAGAAAAGAAAAGAAAAGAATATGGCGTCTTCAAGCTATTCAAACTCACCATGTGCAGCATGCAAATTCCTAAGAAGAAAATGCTTAGCAGATTGCATATTTGCACCCTACTTTCCCCCTGAAGAGCCAACCAAATTTGCCAATGTTCACAAGATCTTTGGAGCCAGCAATGTGAGCAAGCTTCTGAATGAGGTCCAGCCCCATCAGCGCGAGGATGCCGTAAATTCTCTAGCTTATGAGGCCGAGGCTCGCATGAAAGACCCTGTCTACGGTTGCGTCGGGGCCATCTCCGTTCTCCAGCGACAAGTCATTCGCTTGCAGAAGGAGCTCGATGCTACAAATGCTGATTTAGTCCGATACGCTAGCGGGGGCGCCCGTCCGCCCTCCCAATTTGGAAGGAGGGCAGCAACCGCCTCCATCACTCGCCATCATTCTGGTCTGTCTTTTCTTTCTCCCTTGAGTAGTAATGATCATGATGCTTCTTATTGCCATGATAAAGAGGAAGGCAATTGAAAATTTTGTATGCCTTTGTGAGTCAGATGGGGTTTTCCATTAATTCTGCCTATCCCATGTTCCTCTTCTGTTCTAAGCCTCTTTATATATATATATATATATATATTTTCTCTCTTGATCTATCATAGAGGTGATTTTTTTGGGTGCATCATTAGTCTTTGCATCTAAAATTAGATTGTTTATATATTATGTTTAAGAGTTCTTTAATATAATGAGATATGAAGTGTA | 960 | 40.42 | MASSSYSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGGARPPSQFGRRAATASITRHHSGLSFLSPLSSNDHDASYCHDKEEGN | 163 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 12401586 | 12405066 | - | XM_039034772.1 | Bhi06g00551 | 36890 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi06g00551 | 163 | Coils | Coil | 89 | 109 | - | - | |
| Bhi06g00551 | 163 | Pfam | Lateral organ boundaries (LOB) domain | 10 | 106 | IPR004883 | - | |
| Bhi06g00551 | 163 | ProSiteProfiles | LOB domain profile. | 9 | 110 | IPR004883 | - | |
| Bhi06g00551 | 163 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 1 | 125 | - | - | |
| Bhi06g00551 | 163 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 25 | 1 | 125 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Bhi06g00551 | Bhi11g01604 | CCT | |
| Bhi06g00551 | Bhi11g01604 | ECH |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi06g00551 | Bhi-Chr6:12401586 | Bhi06g01185 | Bhi-Chr6:34030228 | 1.11E-57 | dispersed | |
| Bhi06g00551 | Bhi-Chr6:12401586 | Bhi06g00552 | Bhi-Chr6:12401588 | 1.16E-121 | tandem | |
| Bhi04g02291 | Bhi-Chr4:62921926 | Bhi06g00551 | Bhi-Chr6:12401586 | 3.02E-49 | transposed | |
| Bhi06g00975 | Bhi-Chr6:26788353 | Bhi06g00551 | Bhi-Chr6:12401586 | 6.55E-36 | transposed | |
| Bhi10g02237 | Bhi-Chr10:58152963 | Bhi06g00551 | Bhi-Chr6:12401586 | 1.76E-51 | transposed | |
| Bhi11g01604 | Bhi-Chr11:46239538 | Bhi06g00551 | Bhi-Chr6:12401586 | 7.46E-82 | transposed | |
| Bhi06g00551 | Bhi-Chr6:12401586 | Bhi08g01650 | Bhi-Chr8:46580059 | 1.88E-61 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 1337 | PF03195 | LOB | 9.30E-42 | No_clan | Bhi | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi06g00551 | - | - | csv:101216489 | 316.235 |