Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g00552 TTTTGCAGGCCCCCCCTCTTCTCTTATTTCATCTCTTCTAGGGTTTCTTCCTTTTGTTTTTTCATCTTTATATTTACCTTTTAAATTAATTCTTCCAATTAATTCCCTCTTGGAAATATTTTTTATATGTGTCCTTTTTTCCCCCTTCTCTTCTCCCTCTAATCTTAAGCTTCTTCAAACCATCTTGTGGAGAAAAAAGCATCTGATCAAGAAGGAAGAAAAAAGAAAAGAAAAGAAAAGAATATGGCGTCTTCAAGCTATTCAAACTCACCATGTGCAGCATGCAAATTCCTAAGAAGAAAATGCTTAGCAGATTGCATATTTGCACCCTACTTTCCCCCTGAAGAGCCAACCAAATTTGCCAATGTTCACAAGATCTTTGGAGCCAGCAATGTGAGCAAGCTTCTGAATGAGGTCCAGCCCCATCAGCGCGAGGATGCCGTAAATTCTCTAGCTTATGAGGCCGAGGCTCGCATGAAAGACCCTGTCTACGGTTGCGTCGGGGCCATCTCCGTTCTCCAGCGACAAGTCATTCGCTTGCAGAAGGAGCTCGATGCTACAAATGCTGATTTAGTCCGATACGCTAGCGGGGGCGCCCGTCCGCCCTCCCAATTTGGAAGGAGGGCAGCAACCGCCTCCATCACTCGCCATCATTCTGGTCTGTCTTTTCTTTCTCCCTTGAGTAGTAATGATCATGATGCTTCTTATTGCCATGATAAAGAGGAAGGCAATTGAAAATTTTGTATGCCTTTGTGAGTCAGATGGGGTTTTCCATTAATTCTGCCTATCCCATGTTCCTCTTCTGTTCTAAGCCTCTTTATATATATATATATATATATATTTTCTCTCTTGATCTATCATAGAGGTGATTTTTTTGGGTGCATCATTAGTCTTTGCATCTAAAATTAGATTGTTTATATATTATGTTTAAGAGTTCTTTAATATAATGAGATATGAAGTG 961 40.48 MASSSYSNSPCAACKFLRRKCLADCIFAPYFPPEEPTKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISVLQRQVIRLQKELDATNADLVRYASGGARPPSQFGRRAATASITRHHSGLSFLSPLSSNDHDASYCHDKEEGN 163
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 12401588 12405066 - XM_039034771.1 Bhi06g00552 36891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g00552 163 Coils Coil 89 109 - -
Bhi06g00552 163 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
Bhi06g00552 163 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Bhi06g00552 163 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 125 - -
Bhi06g00552 163 PANTHER LOB DOMAIN-CONTAINING PROTEIN 25 1 125 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g00552 Bhi-Chr6:12401588 Bhi11g01604 Bhi-Chr11:46239538 6.12E-78 dispersed
Bhi06g00551 Bhi-Chr6:12401586 Bhi06g00552 Bhi-Chr6:12401588 1.16E-121 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1338 PF03195 LOB 9.30E-42 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g00552 - - csv:101216489 316.235