Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g00597 TCTTCTTCTTCAAACTTTTTCTTCTTTTGAACTCTAATGGCGGCTTCTTCTTCTCTTTCCTTTCTCTTTCTTCTTTTATCTCTTTCTTTCTTCTTCACTATGTCTGTTTCAACAACAACTTCCAATTCCTCCTTGCATTCTGTTCATCAACATCCGCATCTTGTCGTTCAAGATGTTCAAAGGAGCATAAATGCATCAAGGAGAAACTTGGGATATTTCTCTTGCGGAACGGGAAACCCAATAGACGATTGCTGGAGATGCGATTCCAATTGGGCAACCAATCGTAAACGCTTAGCCGATTGCGCCATCGGCTTCGGCAAAAACGCCATCGGAGGAAAAAACGGCCGTTTCTACGTTGTCACGGACGCCGGCGACGACGACCCTGTCAACCCACGCCCCGGCACTCTCCGGCACGCCGTCATTCAAAACGAACCCTTGTGGATCATTTTCAAACGTGACATGGTAATCCAACTCACCCAAGAACTCGTAATGAACTCGTTCAAAACAATCGACGGACGTGGGGCCAGCGTCCATGTGGCAGGTGGGCCATGTATAAAAATCCATTACGCCACAAATATTATAATCCACGGCATTCATATTCACGATTGTAAGAGAGGGGGAAACGCTAATATACGGGACTCCCCACAGCATTCTGGGTGGTGGACTGCATCGGACGGTGATGGAGTGTCAATATTAGGAGGAAGAGAAATCTGGATCGATCATTGCTCTCTGTCTAATTGTAATGATGGGTTGATTGATGCGATTCATGGGTCCACTGCTATTACTATATCCAATAATTATATGACACATCATGATAAGGTGATGTTGTTGGGACATAGTGATTCTTATGCACAAGATAAAAATATGCAAGTTACTATTGCTTTTAACCATTTTGGTGAAGGACTTGTTCAGCGAATGCCAAGATGTAGACATGGTTATTTCCATGTCGTGAACAACGATTACACCCACTGGGAAATGTACGCCATCGGAGGGAGTGCTTCGCCAACGATATACAGCCAAGGGAACAGATTTGCAGCGCCCTACAATCGCTTCCGAAAGGAGGTAACAAAGCACGAGGACGCGCCGGAGAGCGAGTGGCGCCACTGGAATTGGCGCTCCGAGGGCGACATGATGTTGAACGGCGCTTATTTCCGCCAGTCCGGCGCCGGTGCCGCCTCCAGCTATGCACGAGCTAACAGCCTCAGCGCGAGACCCTCCTCTCTTGTTAGCTCTATCACCGTTACCGCCGGCGCCCTCAACTGCCGCAAGGGCTCTCGCTGCTAGTGCTAGTTCTACATTATTTAGTATATCTTTTAGTTAAATTATATTAAAAAAGGTATAATTAGTTCATGAATATCGGGAAATTTTTTCCTGTGTTAATTTATTTTCCTTCCAACATTTTGGGTTTTAGCAAAATGAAAGTGTAATATTTGGTTGAACTCGGATGTTTGTGAGTGTGAAAGCTAATGGGAGAAAATGAGGAATATAGTTATATATTTTGA 1502 45.07 MAASSSLSFLFLLLSLSFFFTMSVSTTTSNSSLHSVHQHPHLVVQDVQRSINASRRNLGYFSCGTGNPIDDCWRCDSNWATNRKRLADCAIGFGKNAIGGKNGRFYVVTDAGDDDPVNPRPGTLRHAVIQNEPLWIIFKRDMVIQLTQELVMNSFKTIDGRGASVHVAGGPCIKIHYATNIIIHGIHIHDCKRGGNANIRDSPQHSGWWTASDGDGVSILGGREIWIDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSYAQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFAAPYNRFRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFRQSGAGAASSYARANSLSARPSSLVSSITVTAGALNCRKGSRC 415
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 13374485 13378504 + XM_039034797.1 Bhi06g00597 36936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g00597 415 Pfam Pectate lyase 150 332 IPR002022 -
Bhi06g00597 415 PANTHER PECTATE LYASE 14 412 - -
Bhi06g00597 415 PRINTS Pollen allergen Amb family signature 89 106 IPR018082 -
Bhi06g00597 415 PRINTS Pollen allergen Amb family signature 113 138 IPR018082 -
Bhi06g00597 415 PRINTS Pollen allergen Amb family signature 149 165 IPR018082 -
Bhi06g00597 415 PRINTS Pollen allergen Amb family signature 213 234 IPR018082 -
Bhi06g00597 415 PRINTS Pollen allergen Amb family signature 293 312 IPR018082 -
Bhi06g00597 415 PRINTS Pollen allergen Amb family signature 315 334 IPR018082 -
Bhi06g00597 415 PRINTS Pollen allergen Amb family signature 357 381 IPR018082 -
Bhi06g00597 415 PRINTS Pollen allergen Amb family signature 386 409 IPR018082 -
Bhi06g00597 415 PANTHER PECTATE LYASE 18-RELATED 14 412 IPR045032 GO:0030570
Bhi06g00597 415 SMART amb_all 141 338 IPR002022 -
Bhi06g00597 415 Gene3D - 66 408 IPR012334 -
Bhi06g00597 415 SUPERFAMILY Pectin lyase-like 49 409 IPR011050 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g00597 Bhi-Chr6:13374485 Bhi08g01685 Bhi-Chr8:47635954 0 dispersed
Bhi06g00597 Bhi-Chr6:13374485 Bhi12g01516 Bhi-Chr12:49105909 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g00597 K01728 - csv:101217834 766.148