Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g00669 TTATAATATAAATAGGGAGAGACCCCACCGTGAAAGATATACAATCTAATTGTGCTTCACTCAACACAAGTCCAATTGATATTGTCTTAACCATTAGAATGTATGAGATATGTTTTGTAGGTGAATTCAAAGTGGATAATCCGAATCACCTAATCCGAATAACAATGTTTATCCAACTAAATTCACACATCAACATCCATCTTCACATTGTTTTGGTTGAAAATCAATGTAACCAACTCACATCCCTATTGCAATGTAGCCTCATCATTAAAAAAAGGGGAAAAAAAGTGAAGCAAGCATGTTAATTATTTCTTAAATGAGACGCTAGATAGGGCAAGATAGCTAGGAAGTGACAAAAGCATCATTTTCTAGAATTGGTTTTTTTATTATTTAAATAAAGACATCACATAATTACCTCTCTATCCCAATTCCAATTTACCCTTTTCTGTGAGCTATGGGTCTAAGTCTAAGGCCATAATTTCAACGTTAAAAAGCAATAAAACTTTTTGGTAATTTTCAGAAACCGATAACAAAAGGCATCGTGGCAACTCACGATTGGTCAGATCCTGTAATAAAAAGACACCAAAAGGCCAAAACTACTTCTACTTGGTGTACACGTTAAGAAGAGTCCACATCATGATTTTTAACAGACTTCCCACTTTTTCCCCTAAAGGTTTCACCGGACGACGGCGGAGCCGACGGCGCCGATAGCGACGGCGGCAGCAACTTGGGGGGTTTTGTTTTGTTTTGCCTTGCCGCTGATGCTGTTAAAATAATAATAAGAGTCACACAGAGCTTGAGCCCACTCGGTCTACTACTAACTTTTATTTTCCCAATGCCCTCTCTGTCCTCTATTCTTTGCCCATTTGTTCTTTCAAGTCTCTTCGTTACTTTTGTTTTCACTCTCTCTCTCTCTCTCTCTCTCTAAAAGCTCAAGATCTGGCCTCTCTCTCTCTCATGGTAGTTGTTGCTTTCGTTGCCAATCAATTTCTTTAGGATCTAAAAGAGAAAGCTGCTGAGATTCAGAGAAGAAATGGAGATTTTGTGCTGAGGTCAGATGATTGAATAGGAAATGGGGAAGAGGGGGGGCTGGTTTTCTGCTGTGAAGAAAGCATTTGCTCCTGAATCTAAGGAAAAGAAAGATCAGAAAACCAACAAATCAAAGAAAAGATGGTTTGGGAAGCCAAAGAAATTGGAGACAGTGGCATCTGCAGAGCCAGCTTCATTGGATGTGTCTGTTCTACCAATTGAAGAGGTGAAACTAGCAGATGCAGAGAATGAACAGAGCAAACATGCTTACTCTGTTGCCATTGCCACTGCAGTCGCTGCCGAGGCAGCTGTTGCAGCCGCCCAGGCTGCGGCGGAGGTCGTTCGGCTCACTACCATCCCTCGTTACTCCGGGAAATCAAAGGAAGAAATAGCAGCCATCAAGATCCAGACTGCATTCCGTGGCTATATGGCAAGGAGGGCCCTGCGGGCATTAAGAGGGCTGGTGAGGCTAAAGTCATTGATACAAGGCCAATCTGTTAAAAGACAAGCAACAACCACATTAAGATGCATGCAGACTCTTGCTCGTGTGCAGTCACAGATTCGTGCAAGAAGAATTAGAATGTCAGAGGAGAATCAGGCTCTTCAGAGGCAGCTCCAACAAAAACATGAAAGAGAGCTTGAGAGATTAACTTCTTCTGCAAACAATGAATGGAATGACAGTACCAAATCGAAGGAGCAAATTGAAGCTAGATTAGTTAATAGGCAAGAAGCAGCAACAAGAAGAGAAAGGGCATTGGCGTATGCTTACTCTCATCAGAATTCATGGAAGAATTCTTCAAAATCTGCAAACCCTACATTCATGGACCCGAACAACCCCCGCTGGGGATGGAGTTGGTTAGAACGATGGATGGCCGCTCGTCCATGGGAGACTAAGAGCACCGTCGATTATCACGAGCGTGGCTCCGTCAAGAGCGTGATCAGCCATACAACTTCGATCGGAGACATCGCCAAAGCTTACGCCCGTCGCGATCTCAATCTCGACATCAAGCCTTTTCCAAGGACTCCTACGAGCCAAAAAACGAGCCGAGCTCCGAGTCACCAATCGCCGGCGACTCCCACGAAGGCGCATTCATCTCTATCTGCAGGGAGAAAATTGAAGCCGGATAGTCCAAGAGGAATCAACTGGGGCGGAGACGCCGATTCCAGAAGCGCATTGAGCGTCAAATCCGAGCGGTATCGGCGACACAGCATCGCCGGATCATCGGTGAGAGATGATGAAAGCTTCACGAGTTCGCCATCGGTTCCAAGCTACATGGCGTCCACAGAAGCAGCCAGGGCTAGATCCCGGTTGTCGAGTCCAAGGGGAACGGAGAAAACGGCGGCGATTCTAGAGAAGGGACCGGCGATTATCGGCGCAAAGAAACGGCTGTCGTTCCCCGGCTCGCCGGCGAACTCGAGGAGGCACTCTGATCCAGCGAAAATAGACGCTAGTCCGATCAAGAATGTGGCAGAGAGAGATTTTACCGGCGAGAGCAGATAGTTGAAGAAGATGATGGATTTAGTAGTGATTTTTATTTTTAATCATCGTTTTTATTCTATTTTATTTTATTTTTAATTTTTTAGCTACGGTCGTTTTTTTTTTTTTTTTGGTTTGAAGGCAGGAAAATGGTGAATAAAAAGTAGATTTTCTGTTTTTATGTAAATGGAATTGGGGTTTGTTTGGGTGTGATTTTTTTTAGGTATATAATTTGACAACATTGTTGTTTTCAAATA 2763 43.61 MGKRGGWFSAVKKAFAPESKEKKDQKTNKSKKRWFGKPKKLETVASAEPASLDVSVLPIEEVKLADAENEQSKHAYSVAIATAVAAEAAVAAAQAAAEVVRLTTIPRYSGKSKEEIAAIKIQTAFRGYMARRALRALRGLVRLKSLIQGQSVKRQATTTLRCMQTLARVQSQIRARRIRMSEENQALQRQLQQKHERELERLTSSANNEWNDSTKSKEQIEARLVNRQEAATRRERALAYAYSHQNSWKNSSKSANPTFMDPNNPRWGWSWLERWMAARPWETKSTVDYHERGSVKSVISHTTSIGDIAKAYARRDLNLDIKPFPRTPTSQKTSRAPSHQSPATPTKAHSSLSAGRKLKPDSPRGINWGGDADSRSALSVKSERYRRHSIAGSSVRDDESFTSSPSVPSYMASTEAARARSRLSSPRGTEKTAAILEKGPAIIGAKKRLSFPGSPANSRRHSDPAKIDASPIKNVAERDFTGESR 485
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 15674752 15679753 + XM_039034534.1 Bhi06g00669 37008

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g00669 485 Gene3D iswi atpase 111 149 - -
Bhi06g00669 485 MobiDBLite consensus disorder prediction 1 35 - -
Bhi06g00669 485 MobiDBLite consensus disorder prediction 324 351 - -
Bhi06g00669 485 Pfam IQ calmodulin-binding motif 117 135 IPR000048 GO:0005515
Bhi06g00669 485 Pfam Protein of unknown function (DUF4005) 384 461 IPR025064 -
Bhi06g00669 485 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 471 - -
Bhi06g00669 485 SMART iq_5 113 135 IPR000048 GO:0005515
Bhi06g00669 485 MobiDBLite consensus disorder prediction 319 485 - -
Bhi06g00669 485 ProSiteProfiles IQ motif profile. 114 142 IPR000048 GO:0005515
Bhi06g00669 485 MobiDBLite consensus disorder prediction 395 411 - -
Bhi06g00669 485 Coils Coil 177 197 - -
Bhi06g00669 485 PANTHER IQ-DOMAIN 5-RELATED 1 471 - -
Bhi06g00669 485 MobiDBLite consensus disorder prediction 377 394 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g00669 - - - csv:101209731 832.787
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g00669 Bhi-Chr6:15674752 Bhi07g00879 Bhi-Chr7:29860504 6.92E-150 dispersed
Bhi06g00668 Bhi-Chr6:15674751 Bhi06g00669 Bhi-Chr6:15674752 0 tandem
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi06g00669 . 1 479 IQD Protein Family AT3G52290 54.2 5.3e-102 369.0
Bhi06g00668 . 1 479 IQD Protein Family AT3G52290 54.2 5.3e-102 369.0
Bhi02g01384 . 1 408 IQD Protein Family AT3G22190 57.5 1.5e-96 350.9
Bhi02g01383 . 1 408 IQD Protein Family AT3G22190 57.5 1.5e-96 350.9
Bhi02g01385 . 1 408 IQD Protein Family AT3G22190 57.5 1.5e-96 350.9
Bhi09g03139 . 1 438 IQD Protein Family AT2G26180 61.6 9.3e-120 427.9
Bhi03g00330 . 1 274 IQD Protein Family AT2G33990 53.6 1.2e-61 234.2
Bhi03g00327 . 1 274 IQD Protein Family AT2G33990 53.6 1.2e-61 234.2
Bhi03g00326 . 1 274 IQD Protein Family AT2G33990 53.6 1.2e-61 234.2
Bhi03g00329 . 1 274 IQD Protein Family AT2G33990 53.6 1.2e-61 234.2
Bhi03g00328 . 1 274 IQD Protein Family AT2G33990 53.6 1.2e-61 234.2
Bhi03g00324 . 4 223 IQD Protein Family AT2G33990 57.6 5.8e-59 225.3
Bhi03g00323 . 4 223 IQD Protein Family AT2G33990 57.6 5.8e-59 225.3
Bhi03g00325 . 4 223 IQD Protein Family AT2G33990 57.6 5.8e-59 225.3
Bhi01g03276 . 83 266 IQD Protein Family AT2G33990 53.5 1.6e-48 190.7
Bhi01g03276 . 86 259 IQD Protein Family AT3G15050 62.7 8.5e-55 211.5
Bhi03g00330 . 56 232 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00327 . 56 232 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00326 . 56 232 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00329 . 56 232 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00328 . 56 232 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00324 . 5 181 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00323 . 5 181 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00325 . 5 181 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi12g01121 . 124 476 IQD Protein Family AT5G13460 52.1 9.4e-78 288.5
Bhi12g02233 . 1 508 IQD Protein Family AT4G00820 51.3 2.8e-113 406.8
Bhi12g02232 . 1 509 IQD Protein Family AT4G00820 51.2 3.7e-113 406.4
Bhi01g00618 . 1 466 IQD Protein Family AT4G00820 50.5 1.1e-104 378.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005280 2 2 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 6 1 0 40
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi06g00669 Bhi_Chr06 FPKM 9.757428 12.163276 12.635254 13.05522 12.92331 12.740699 15.939747 21.003069 22.587843 22.157331