Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g00889 ACCAAACACAGGCTTCCTTAATCATCAGCACATGAACTTGGTTTTGTCTACTGATGCAAAACCGAGGCTTAAATGGACTCCTGAGCTTCATGAAAGATTTGTTGAGGCTGTCAATCATCTTGGTGGAGCAGATAAGGCCACACCTAAGAGTTTGATGAGAGTGATGGGAATCACTGGCCTTAGTCTTTACCATCTCAAGAGCCATTTACAGAAATACAGGTTGGGTAAAAGCCAGCAATCTGAAACCAATGCCCATCTCAAGCTTCAAGAGATGCAGAGAAAAGGTGGGCATTTTGATGGGGAGGAAGAAAACAAGGATAGGATTCAAAATCATAACGAAACAGAGAACATGAAGATATCAGAAGCTCTACAAATGCAATTAGAAGTACAGAAGAAACTGCAAGAACAAATAGAGGTACAAAGGCATTTGCAGCTGAGAATCGAAGCACAAGGGAAGTATTTAAAGACAGTATTAAGAAAAGCACAAGAGACGATTGCAGGGTACGGATGTTGTTCTGAAGCACTTGAAGAGGCAAAAGCAGAGCTCTCTCAATTGGCTTCAATGGTGAGCTCTGGTTGTCAGAGCTCTTCTATATCAGAATTGACTGACTCAACAGAACTTAATTTCAAAGGTTTTGAAAGAGTGGGAAGAAGAATGTGTTCCATTGAAAGCTCTTTAACGTCTTCAGAGACATCAGAAGAGGCCCCAATCACGAGGAAGAGAAAAGGAAAAGAAAAGGAAAAAGAACAGAGTAGCTCTGTTTCTGAGGGAGATTGTAAGAGATTAACAATGCATAAAAGTGATGAGGAACACGACGAATTCAGAATGATCGACTTGAATGATTCACAATTTGACAATACTGCAATAGGAATTGCATCACTGTTGATCGAGTTTCTTTGAAAAGGGGGTCTTGAATGAATATGTGAAAGTATGGTGCTGAAAAGTTGGCATTTGCTTGTAAAATGTGTAAATGGGGGTATTGTACTATTGTATATAACGCATGTTTTTCATTTCGTAAGTAACATTTCAAGGTAAACCCAATGTTAAAATACATTATGTGTTAATTTGCTAGCTAAACCATGTAAACATCAATATCATATAAAAGCAATTATGGTTTCATTTTAGTCA 1129 38.35 MNLVLSTDAKPRLKWTPELHERFVEAVNHLGGADKATPKSLMRVMGITGLSLYHLKSHLQKYRLGKSQQSETNAHLKLQEMQRKGGHFDGEEENKDRIQNHNETENMKISEALQMQLEVQKKLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCCSEALEEAKAELSQLASMVSSGCQSSSISELTDSTELNFKGFERVGRRMCSIESSLTSSETSEEAPITRKRKGKEKEKEQSSSVSEGDCKRLTMHKSDEEHDEFRMIDLNDSQFDNTAIGIASLLIEFL 289
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 23276394 23278269 - XM_039033721.1 Bhi06g00889 37228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g00889 289 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL8 1 273 - -
Bhi06g00889 289 MobiDBLite consensus disorder prediction 213 257 - -
Bhi06g00889 289 Gene3D - 9 67 - -
Bhi06g00889 289 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 1 273 IPR044848 GO:0003700
Bhi06g00889 289 Pfam MYB-CC type transfactor, LHEQLE motif 107 154 IPR025756 -
Bhi06g00889 289 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 67 IPR017930 -
Bhi06g00889 289 Pfam Myb-like DNA-binding domain 12 63 IPR001005 -
Bhi06g00889 289 SUPERFAMILY Homeodomain-like 9 65 IPR009057 -
Bhi06g00889 289 MobiDBLite consensus disorder prediction 224 257 - -
Bhi06g00889 289 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 10 65 IPR006447 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g00889 Bhi-Chr6:23276394 Bhi11g01505 Bhi-Chr11:43469731 1.61E-66 dispersed
Bhi06g00889 Bhi-Chr6:23276394 Bhi06g00890 Bhi-Chr6:23276394 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1360 PF00249 Myb_DNA-binding 1.40E-07 CL0123 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g00889 - - bhj:120079511 523.472