Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g00890 TTATCATCAAATTGAATTATTATTATTATTATTATTATTATTCTTTTTTCTTTTTTAAATAACCCACAAAATCCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTATTACCTAAACACCAACAAAAAAGACCATAATTATGCAGAATCATCAGCACATGAACTTGGTTTTGTCTACTGATGCAAAACCGAGGCTTAAATGGACTCCTGAGCTTCATGAAAGATTTGTTGAGGCTGTCAATCATCTTGGTGGAGCAGATAAGGCCACACCTAAGAGTTTGATGAGAGTGATGGGAATCACTGGCCTTAGTCTTTACCATCTCAAGAGCCATTTACAGAAATACAGGTTGGGTAAAAGCCAGCAATCTGAAACCAATGCCCATCTCAAGCTTCAAGAGATGCAGAGAAAAGGTGGGCATTTTGATGGGGAGGAAGAAAACAAGGATAGGATTCAAAATCATAACGAAACAGAGAACATGAAGATATCAGAAGCTCTACAAATGCAATTAGAAGTACAGAAGAAACTGCAAGAACAAATAGAGGTACAAAGGCATTTGCAGCTGAGAATCGAAGCACAAGGGAAGTATTTAAAGACAGTATTAAGAAAAGCACAAGAGACGATTGCAGGGTACGGATGTTGTTCTGAAGCACTTGAAGAGGCAAAAGCAGAGCTCTCTCAATTGGCTTCAATGGTGAGCTCTGGTTGTCAGAGCTCTTCTATATCAGAATTGACTGACTCAACAGAACTTAATTTCAAAGGTTTTGAAAGAGTGGGAAGAAGAATGTGTTCCATTGAAAGCTCTTTAACGTCTTCAGAGACATCAGAAGAGGCCCCAATCACGAGGAAGAGAAAAGGAAAAGAAAAGGAAAAAGAACAGAGTAGCTCTGTTTCTGAGGGAGATTGTAAGAGATTAACAATGCATAAAAGTGATGAGGAACACGACGAATTCAGAATGATCGACTTGAATGATTCACAATTTGACAATACTGCAATAGGAATTGCATCACTGTTGATCGAGTTTCTTTGAAAAGGGGGTCTTGAATGAATATGTGAAAGTATGGTGCTGAAAAGTTGGCATTTGCTTGTAAAATGTGTAAATGGGGGTATTGTACTATTGTATATAACGCATGTTTTTCATTTCGTAAGTAACATTTCAAGGTAAACCCAATGTTAAAATACATTATGTGTTAATTTGCTAGCTAAACCATGTAAACATCAATATCATATAAAAGCAATTATGGTTTCATTTTAGTCA 1258 36.41 MQNHQHMNLVLSTDAKPRLKWTPELHERFVEAVNHLGGADKATPKSLMRVMGITGLSLYHLKSHLQKYRLGKSQQSETNAHLKLQEMQRKGGHFDGEEENKDRIQNHNETENMKISEALQMQLEVQKKLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCCSEALEEAKAELSQLASMVSSGCQSSSISELTDSTELNFKGFERVGRRMCSIESSLTSSETSEEAPITRKRKGKEKEKEQSSSVSEGDCKRLTMHKSDEEHDEFRMIDLNDSQFDNTAIGIASLLIEFL 295
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 23276394 23278231 - XM_039033720.1 Bhi06g00890 37229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g00890 295 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 279 IPR044848 GO:0003700
Bhi06g00890 295 Pfam Myb-like DNA-binding domain 18 69 IPR001005 -
Bhi06g00890 295 MobiDBLite consensus disorder prediction 219 263 - -
Bhi06g00890 295 Pfam MYB-CC type transfactor, LHEQLE motif 113 160 IPR025756 -
Bhi06g00890 295 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 16 71 IPR006447 GO:0003677
Bhi06g00890 295 SUPERFAMILY Homeodomain-like 15 71 IPR009057 -
Bhi06g00890 295 MobiDBLite consensus disorder prediction 230 263 - -
Bhi06g00890 295 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL8 4 279 - -
Bhi06g00890 295 Gene3D - 15 73 - -
Bhi06g00890 295 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 73 IPR017930 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g00890 Bhi-Chr6:23276394 Bhi11g01505 Bhi-Chr11:43469731 2.22E-66 dispersed
Bhi06g00889 Bhi-Chr6:23276394 Bhi06g00890 Bhi-Chr6:23276394 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1361 PF00249 Myb_DNA-binding 1.40E-07 CL0123 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g00890 - - bhj:120079511 537.724