Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g00891 TTCTTCATCAAAAATGAATTTTCATTTTCTCTTTTTATTGCCATTTCTCTCACTCCTCTCCTCCGCCGCGGCATGGATTCATGCTCACGCCACCTTCTACGGCGGCAGCGATGCTTCCGGCACAATGGGTGGAGCTTGTGGGTATGGGAATCTTTACAGTGAAGGGTACGGGACCAACACTGCGGCAATTAGCACTGCGCTTTTCAACAATGGGTTGAGCTGTGGGTCTTGTTATGAGATCAAGTGTGTGGATGACCCCCAATGGTGCCTCCCTGGCTCCATTTTGGTCACTGCTACCAACTTCTGTCCGCCTAATAACGCTCTTCCTAATGACGCCGGCGGCTGGTGCAACCCTCCCCTCCACCACTTTGACCTCTCCCAGTCTGTCTTCCTCCATATTGCTCAATACCGCGCCGGCATCGTCCCTGTCGCCTATCGGAGAGCTCCATGTAAGAGGAATGGAGGAGTAAGGTTCACAATAAACGGCCATTCCTACTTCAACTTAGTACTGATAACAAACGTGGGGGGCGCCGGGGATGTGCATGCTGTGTCGGTGAAAGGCTCCAAAACTGGAGGGTGGCAATCAATGTCAAGAAACTGGGGACAGAACTGGCAAAGCCACAACTATTTGGATGCTCAAACCCTCTCTTTCAAGCTCACTACTAGCGACGGCCGTACGCTTGTTTCCAACAATGTCGTTCCTGCTGGTTGGTCCTTTGGCCAGACCTTCACCGGCGCCCAATTCCGGTGAACAACCACCGCCACCGCCTCCCTTTCTCTCTCTCTCTCTCTCTTTCGGAATGCCCATGTTTTAATTTCAAAGGGCTTTTTCGTCATTTCGGTGGTTATTTATTTTTTTGTATGTGGTGGGGAATGAGACAAGTGGGGCCGAGGTGGACTCTTCTTACCACCCGCCTTTCAGTGTTTGAACGTGCGTTTTGGTTGGATCTTGGAGGGAAAACCCTTTTTTCCCTCTCTTTTTGCTTTTTTGGTTGAGTTGTAACCGTGAAATTTAGGCTTATT 1023 50.15 MNFHFLFLLPFLSLLSSAAAWIHAHATFYGGSDASGTMGGACGYGNLYSEGYGTNTAAISTALFNNGLSCGSCYEIKCVDDPQWCLPGSILVTATNFCPPNNALPNDAGGWCNPPLHHFDLSQSVFLHIAQYRAGIVPVAYRRAPCKRNGGVRFTINGHSYFNLVLITNVGGAGDVHAVSVKGSKTGGWQSMSRNWGQNWQSHNYLDAQTLSFKLTTSDGRTLVSNNVVPAGWSFGQTFTGAQFR 245
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 23389068 23391113 - XM_039033802.1 Bhi06g00891 37230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g00891 245 PRINTS Expansin signature 51 65 IPR002963 GO:0009664
Bhi06g00891 245 PRINTS Expansin signature 78 89 IPR002963 GO:0009664
Bhi06g00891 245 PRINTS Expansin signature 90 100 IPR002963 GO:0009664
Bhi06g00891 245 PRINTS Expansin signature 109 126 IPR002963 GO:0009664
Bhi06g00891 245 PRINTS Expansin signature 126 139 IPR002963 GO:0009664
Bhi06g00891 245 PRINTS Expansin signature 150 162 IPR002963 GO:0009664
Bhi06g00891 245 PRINTS Expansin signature 162 183 IPR002963 GO:0009664
Bhi06g00891 245 PRINTS Expansin signature 198 219 IPR002963 GO:0009664
Bhi06g00891 245 PRINTS Expansin signature 227 243 IPR002963 GO:0009664
Bhi06g00891 245 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 161 241 IPR007117 -
Bhi06g00891 245 PANTHER EXPANSIN-A15 6 244 IPR002963 GO:0009664
Bhi06g00891 245 Gene3D - 148 244 IPR036749 -
Bhi06g00891 245 Gene3D - 13 147 IPR036908 -
Bhi06g00891 245 SMART dpbb_1 56 141 IPR007112 -
Bhi06g00891 245 Pfam Expansin C-terminal domain 152 230 IPR007117 -
Bhi06g00891 245 SUPERFAMILY PHL pollen allergen 148 241 IPR036749 -
Bhi06g00891 245 PRINTS Expansin/Lol pI family signature 20 35 IPR007118 GO:0005576
Bhi06g00891 245 PRINTS Expansin/Lol pI family signature 38 56 IPR007118 GO:0005576
Bhi06g00891 245 PRINTS Expansin/Lol pI family signature 60 78 IPR007118 GO:0005576
Bhi06g00891 245 PRINTS Expansin/Lol pI family signature 134 150 IPR007118 GO:0005576
Bhi06g00891 245 PRINTS Expansin/Lol pI family signature 189 203 IPR007118 GO:0005576
Bhi06g00891 245 PRINTS Expansin/Lol pI family signature 227 241 IPR007118 GO:0005576
Bhi06g00891 245 PANTHER EXPANSIN 6 244 - -
Bhi06g00891 245 SUPERFAMILY Barwin-like endoglucanases 11 169 IPR036908 -
Bhi06g00891 245 Pfam Lytic transglycolase 56 141 IPR009009 -
Bhi06g00891 245 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 39 151 IPR007112 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00307 Bhi-Chr2:5816495 Bhi06g00891 Bhi-Chr6:23389068 7.62E-138 dispersed
Bhi06g00385 Bhi-Chr6:8321065 Bhi06g00891 Bhi-Chr6:23389068 9.30E-131 dispersed
Bhi06g00891 Bhi-Chr6:23389068 Bhi07g00459 Bhi-Chr7:20231745 4.08E-132 dispersed
Bhi08g00598 Bhi-Chr8:19742027 Bhi06g00891 Bhi-Chr6:23389068 2.95E-119 dispersed
Bhi06g00891 Bhi-Chr6:23389068 Bhi07g01546 Bhi-Chr7:44523309 2.32E-149 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g00891 - - csv:101202833 444.506