Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g00949 AAAAGCTGCCATCTTTGAATTGTGGAATAGTGAAGCGGCAACCTGGAATATTTGGTCAAGGAGTAATCTTAGTGAAGTAAAAATTGGCAATGGGCTATGCTTTTCAATGCCCTTTCCCAGTGATGGTATCAGCTCATGAAGACTCATGGCAAAACTATGTAATCTTGGCCGAGGCAGATATACAGCAGCGACAGGAGGAAGACATCATGAGAGTATCCACTGTTCTTTCTATTTCAAAAGTAGCCGCGAGCATCTTGCTCCGATATTACAACTGGAGTGTCAGTAAGGTGCATGATGAATGGTTTGCAGATGAAGAAAAGGTCCGTAGATCTGTTGGCTTACTAGAAAAACCAATTTTGCGACATTCCAATGAAGCAGAACTACCTTGTGGTATATGTTTTGAAATCTATTCACGTGATAAGATCCAGTCTGCTGCTTGTGGTCATCCATTTTGCAATGCGTGTTGGACAGGTTATATTAGCACATCTATCAATGATGGTCCAGGATGTCTAATGTTGCGATGTCCAGATCCATCTTGTGGTGCTGCTGTTGGTCAAGATATGATAAATTTATTAGCTTCTGATGATGACAAAAAGAAGTACTTCCGTTATTTTGTTCGATCCTATGTTGAAGACAATAGGAAGACCAAATGGTGCCCCGCTCCAGGATGTGATTATGCTGTAGATTTTATAGTTGGAAGTGGAAGCTATGATGTAACTTGCAGATGCTCCTATAGCTTTTGCTGGAATTGTACTGAGGAAGCTCATCGTCCTGTTGATTGTGTCACTGTAGCTAGATGGATATTGAAGAATAGTGCTGAGTCAGAAAATATGAACTGGATATTGGCAAATTCCAAACCTTGTCCGAAATGCAAACGACCTATTGAGAAAAATCAAGGGTGCATGCATATTACTTGCACACCACCTTGTAAATTTGAGTTCTGCTGGCTTTGCCTTGGTCCGTGGTCTGATCATGGAGAGAGGACAGGAGGATTCTATTCATGTAATCGCTATGAAACTGCAAAGCAGGAGGGAGTGTATGATGATGCCGAGAAGCGCAGAGAGATGGCCAAGAATTCTTTGGAGAGGTACACTCATTATTATGAAAGATGGGCTACCAACCAATCGGTATGCTTTTTATTTCCTGAGACTTTTGAACTTCTGTTCGTTTATTAGGTGCTGGTTATTCCC 1190 41.51 MGYAFQCPFPVMVSAHEDSWQNYVILAEADIQQRQEEDIMRVSTVLSISKVAASILLRYYNWSVSKVHDEWFADEEKVRRSVGLLEKPILRHSNEAELPCGICFEIYSRDKIQSAACGHPFCNACWTGYISTSINDGPGCLMLRCPDPSCGAAVGQDMINLLASDDDKKKYFRYFVRSYVEDNRKTKWCPAPGCDYAVDFIVGSGSYDVTCRCSYSFCWNCTEEAHRPVDCVTVARWILKNSAESENMNWILANSKPCPKCKRPIEKNQGCMHITCTPPCKFEFCWLCLGPWSDHGERTGGFYSCNRYETAKQEGVYDDAEKRREMAKNSLERYTHYYERWATNQSVCFLFPETFELLFVY 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 26088382 26130172 + XM_039034150.1 Bhi06g00949 37288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g00949 361 Pfam Zinc finger, C3HC4 type (RING finger) 100 135 IPR018957 GO:0046872
Bhi06g00949 361 Pfam IBR domain, a half RING-finger domain 248 296 IPR002867 -
Bhi06g00949 361 Pfam IBR domain, a half RING-finger domain 169 231 IPR002867 -
Bhi06g00949 361 ProSiteProfiles TRIAD supradomain profile. 96 309 IPR044066 -
Bhi06g00949 361 SMART ibrneu5 235 305 IPR002867 -
Bhi06g00949 361 SMART ibrneu5 169 231 IPR002867 -
Bhi06g00949 361 SUPERFAMILY RING/U-box 170 238 - -
Bhi06g00949 361 Gene3D - 227 348 - -
Bhi06g00949 361 ProSiteProfiles Zinc finger RING-type profile. 100 144 IPR001841 -
Bhi06g00949 361 SUPERFAMILY RING/U-box 250 298 - -
Bhi06g00949 361 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 20 346 IPR031127 GO:0004842|GO:0016567
Bhi06g00949 361 SUPERFAMILY RING/U-box 95 178 - -
Bhi06g00949 361 CDD RING-HC_RBR_TRIAD1_like 100 150 - -
Bhi06g00949 361 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 20 346 - -
Bhi06g00949 361 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 94 181 IPR013083 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g00947 Bhi-Chr6:26084715 Bhi06g00949 Bhi-Chr6:26088382 0 dispersed
Bhi06g00949 Bhi-Chr6:26088382 Bhi10g02043 Bhi-Chr10:51121725 4.17E-50 dispersed
Bhi06g00948 Bhi-Chr6:26085170 Bhi06g00949 Bhi-Chr6:26088382 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g00949 K11968 - csv:101218052 690.263