Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g00957 ACATTCACATTCAAAATTCTTTGCTTCACTTCCAATTCTCATTCCCCTAACAATGGCCGCCCTTCCTCTTACTCTTCTCCCCATTCTCCTCTCCCTTTTCGCCGTCGACGCTAGAATCCCTGGAGTTTACTCCGGCGGCCAGTGGCAGAGCGCTCATGCTACTTTTTACGGCGGCAGTGACGCCTCCGGAACCATGGGAGGTGCTTGCGGTTACGGAAACTTATACAGCCAAGGCTATGGCGTAAACACGGCGGCGCTAAGCACTGCTCTGTTCAACAACGGTTTGAGCTGTGGAGCCTGCTTCGAGCTTAAGTGCGCTAACGATCCGCAGTGGTGCCATTCCGGCAGTCCGTCGATTTTCATCACCGCCACGAACTTTTGCCCTCCAAACTACGCTCTTCCAAGTGACAATGGCGGCTGGTGCAACCCTCCCCGTCCTCATTTCGACCTCGCCATGCCTATGTTCCTCAAGATCGCCGAGTACAGAGCCGGAATCGTTCCTGTCTCTTACCGCAGGGTGCCATGCCGAAAACAAGGAGGAATAAGATTCACAATCAACGGCTTCCGGTACTTCAACTTGATACTAATCACCAACGTGGCAGGCGCAGGGGACATAGTGAAGGCAAGCGTGAAAGGCAGCAAAACAGAGTGGATGAGCATGAGCAGAAACTGGGGTCAAAACTGGCAATCAAACGCCATTTTGGTTGGTCAGTCACTCTCCTTTAGAGTCACAGCCAGTGACCGTCGCACGTCCACTTCCTGGAACATCGTCCCTTCCAATTGGCAATTTGGGCAGACTTTCACCGGCAAGAATTTCAGGGTCTAATTCCTCTTTTTTTTTTTTTAAATTTTTATTTAACTTTCCCGCTCTTTTTTCTTTCAGTAATTGAATATTCTAGTTTGCTTGTTCTTCTTAGAGGGACGAGAAAGAGGGAGAAAATGAGAGAAAAGTGAGCGGAGTTTTGGGGGGTTTAAATTTAGTGGGAAGGAAACTTTTTGACTTGGGGAAAATGGGAGTGTGTTAGTTAATGGGAGTGTTATTATGGAAAAAAACAAAAGAAAAGGTAAAAAAGGGGTTTTGTTTTGAAAGAAGGGGAAGGGAATGTGGGGGTGTGTTTTGTTGTACTGAGAAATGGCTGAAAGTGGCTGCTAAATTAGTATAGCCCGCAGCTTGCTTATTATTATAATTAT 1191 47.27 MAALPLTLLPILLSLFAVDARIPGVYSGGQWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCANDPQWCHSGSPSIFITATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLILITNVAGAGDIVKASVKGSKTEWMSMSRNWGQNWQSNAILVGQSLSFRVTASDRRTSTSWNIVPSNWQFGQTFTGKNFRV 257
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 26359497 26362371 - XM_039033599.1 Bhi06g00957 37296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g00957 257 SUPERFAMILY PHL pollen allergen 160 252 IPR036749 -
Bhi06g00957 257 PRINTS Expansin signature 61 75 IPR002963 GO:0009664
Bhi06g00957 257 PRINTS Expansin signature 88 99 IPR002963 GO:0009664
Bhi06g00957 257 PRINTS Expansin signature 102 112 IPR002963 GO:0009664
Bhi06g00957 257 PRINTS Expansin signature 121 138 IPR002963 GO:0009664
Bhi06g00957 257 PRINTS Expansin signature 138 151 IPR002963 GO:0009664
Bhi06g00957 257 PRINTS Expansin signature 162 174 IPR002963 GO:0009664
Bhi06g00957 257 PRINTS Expansin signature 174 195 IPR002963 GO:0009664
Bhi06g00957 257 PRINTS Expansin signature 209 230 IPR002963 GO:0009664
Bhi06g00957 257 PRINTS Expansin signature 238 254 IPR002963 GO:0009664
Bhi06g00957 257 SMART dpbb_1 66 153 IPR007112 -
Bhi06g00957 257 Gene3D - 163 255 IPR036749 -
Bhi06g00957 257 PRINTS Expansin/Lol pI family signature 30 45 IPR007118 GO:0005576
Bhi06g00957 257 PRINTS Expansin/Lol pI family signature 48 66 IPR007118 GO:0005576
Bhi06g00957 257 PRINTS Expansin/Lol pI family signature 70 88 IPR007118 GO:0005576
Bhi06g00957 257 PRINTS Expansin/Lol pI family signature 146 162 IPR007118 GO:0005576
Bhi06g00957 257 PRINTS Expansin/Lol pI family signature 200 214 IPR007118 GO:0005576
Bhi06g00957 257 PRINTS Expansin/Lol pI family signature 238 252 IPR007118 GO:0005576
Bhi06g00957 257 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 49 163 IPR007112 -
Bhi06g00957 257 SUPERFAMILY Barwin-like endoglucanases 30 181 IPR036908 -
Bhi06g00957 257 Pfam Lytic transglycolase 66 153 IPR009009 -
Bhi06g00957 257 PANTHER EXPANSIN-A4 11 256 - -
Bhi06g00957 257 Pfam Expansin C-terminal domain 164 241 IPR007117 -
Bhi06g00957 257 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 173 252 IPR007117 -
Bhi06g00957 257 Gene3D - 19 159 IPR036908 -
Bhi06g00957 257 PANTHER EXPANSIN-A15 11 256 IPR002963 GO:0009664
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g00614 Bhi-Chr6:13913187 Bhi06g00957 Bhi-Chr6:26359497 2.56E-153 dispersed
Bhi06g00957 Bhi-Chr6:26359497 Bhi08g00598 Bhi-Chr8:19742027 1.97E-168 dispersed
Bhi11g01337 Bhi-Chr11:39495196 Bhi06g00957 Bhi-Chr6:26359497 1.10E-85 transposed
Bhi12g00340 Bhi-Chr12:10448928 Bhi06g00957 Bhi-Chr6:26359497 4.02E-93 transposed
Bhi10g00718 Bhi-Chr10:15399062 Bhi06g00957 Bhi-Chr6:26359497 3.76E-168 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g00957 - - csv:101218950 524.628