Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g00975 TAAAGGAGACCCCAAAAAAGAAAGCACGTACACATACACACTACTTTTCCTAAAAAAGTTATTATGCCTTTGGGATAGAACAAAAATAACCTTACAACCAAAAAAAAAAAAAAAAAAGCATAATGCAAATGATGGGTTATAAAGACCAACATCTCTTCTTCTTAATTTTATCAAACTTGTCCAATAGTTGTTCCTTTTTCTTCTTGTACTTTAAAGTGTCATCATATAATTGAGACAATGACAGGCCTTAACTCTTCTATTTCTTCTTCTTCTTCTTCATCTTCTTGTGGTGCTTGCAAGTTTCTTAGGAGAAAATGTAGTGATCAATGTGTTTTTGCTCCTTTCTTTAGCTATGAAGAAGCCACTTCCCATTTTGCAGCTGTTCATAAAGTGTTTGGTGCTAGTAATGTCTCCAAGCTTCTCTTACATCTCCCCGTCCATATCCGAAGCCACGCCGCCGTTACCGTTGCTTACGAAGCTCTCGAGCGCATGCGAGATCCCACTTATGGCTGCGTTGCACATATTTTCGCATTGCAGCAAGAGGTCGCGAGCTTGCAAGAAGAGATAGAAATTCTGGGGAGCCAAATAGCAAATTTCGCGGCTGCCGGTGGGAGCATTGCAGCGGTCGAGAATCCACTTATAGATCAGCTTCAAGTCTCACAGCAGCTGAATGATTTTGGGGTGATGAACACAAATGATTATCAAAATGAGCTGCTTTCTGAGTTGCCATACCAAAGTTTTGATAATGTCCAAAATGATAATGGTCAAATGATATCTCCATTGTTTTGTTTAGGGGAAGAAGATGGGGTTTTAGGGTTTTGCAACTCAAATAATGTTGTTGAGAGATCAGCCTTTGATGTTTCAGTTGAGGAGAATTTTATTGGATATCCATGGGTAGTTGGATGA 906 39.29 MTGLNSSISSSSSSSSCGACKFLRRKCSDQCVFAPFFSYEEATSHFAAVHKVFGASNVSKLLLHLPVHIRSHAAVTVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFAAAGGSIAAVENPLIDQLQVSQQLNDFGVMNTNDYQNELLSELPYQSFDNVQNDNGQMISPLFCLGEEDGVLGFCNSNNVVERSAFDVSVEENFIGYPWVVG 222
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 26788353 26789642 + XM_039033486.1 Bhi06g00975 37314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g00975 222 Coils Coil 96 116 - -
Bhi06g00975 222 Pfam Lateral organ boundaries (LOB) domain 16 112 IPR004883 -
Bhi06g00975 222 ProSiteProfiles LOB domain profile. 15 117 IPR004883 -
Bhi06g00975 222 PANTHER LOB DOMAIN-CONTAINING PROTEIN 33 13 170 - -
Bhi06g00975 222 PANTHER LOB DOMAIN CONTAINING PROTEIN 13 170 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g00975 Bhi-Chr6:26788353 Bhi11g02885 Bhi-Chr11:77595502 1.21E-43 dispersed
Bhi06g00975 Bhi-Chr6:26788353 Bhi06g00551 Bhi-Chr6:12401586 6.55E-36 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1363 PF03195 LOB 2.30E-33 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g00975 K13945 - csv:101204875 374.4