Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g01004 ACGGATAAACTAACTTACCAGAAATTGTGTCATCCCTTAAAATTCGAATTTCCCTCCCCACTCCATTTTCCCACTATTCACCAAAATACTGTTTATGGTTTGCGATCATCGTACCCATTTCATTTTCTTCAATTTTCTGTTTGTTTTTCTGTTCTAATTCCCCACCCAATCCAGATTTCTCTTTCTTTTTTACGTTTCCAATGTGTTTTCCTTCGTTTTTCTGTTGAATTTCCCCCCAAATCAACGCAAATTCAATCTTCCCCTGCTTGTATTCTCTGTATTTTGAGAACCCATTTGGTTTTTCGTTTTGCCTGATGGAACAAAGGTCTGTTGTAATGAACCCTAATGCGACCTGTAAGCATTTCGCACCCTTGTTTGTTAATCTGCATTGCAGAGAAGAAGCTCAGAGATGATTTGTATTTATCTTGGGATCAATCTGTCGGAATTTTCATAGGTGTATTTGAAGAGTTGAGATTGTTCACATGAGTTTGGATTCATTTTTTCCAGAGATGTCACTCAAGTTACACCATATTGATCTAAAGGGTGGTTCAGGTACCCAGAAAAGGCTGAAGGATCTCTCGGCTCAGTCTGCCAATAAGTACTGTGCAGATTGTGGATCTCCAGATCCAAAATGGGTATCTGTGAGTTTTGGGGCATTTATTTGCATCAAGTGCTCTGGAGTACACCGAAGCCTTGGAGTGCATATATCTAAGGTTCTTTCAGTGAAGTTGGATGATTGGACAGATGAACAAGTTGATGCTTTGACGAGTGTTGGTGGAAATACTGCTGTAAACAAAAAGTATGAAGTTTGCATCCCAGATGGCAATAAAAAGCCAAAACCAGACTCCTCCATAGAGGAGCGTTTTGATTTTATAAGGAAAAAATATGAGCTGCTGCAATTCGCAAGTCTGGACGATCAGTTTTTCTGTCCTTTTCCACCCCCGCAGAAGAGAAATTCATCACTCTCGCACAGCGCTTCCGGTACTGATGCAAACCAAGAAAGGAGGAATTATGAAAAACTACCAACAAAAACTCGCATTGGAAGTGCATTCCGTAATAGTTGGGGAAGAAAAGATTCTGAACATAAGAACTGCAAGAAGGGAAATGCAAATGCATTGGTATTAAGCAGCTCAATGGCAGGTATGATTGAATTTGTTGGTTTGATTAAGGTCAACGTGGTTAGAGGAACCAATTTAGCCGTCAGGGATGTTGTGACGAGCGATCCATATGTAATTCTCTCGTTAGGCCAGCAATCAGTGAAGACACGAGTTATAAAGAGCAGTTTGAATCCAGTCTGGAATGAGAGTCTAATGCTTTCTATTCCAGATTACATTCCTCCACTAAAAGTGCTTGTGTATGACAAAGATACATTTTCAACCGATGACTTCATGGGTGAAGCAGAAATCGATATCAATCCACTGCTCACCGCGGCCCGGGCCTGTGAGAGGTCCACAATGAATGAACCAATGCAGCTAGGAAAATGGGTTGCAAGCAAGGAGAACACTCTTGCAAAGGATGGCATCATCAGTCTTGTAGATGGGAAGATCCGACAAGACATCTCTTTGAAACTGCAAAACGTCGAGCGAGGCATGCTGGAGATGGAGCTTGAATGTGTTCCTCTTTCTCAGTAGGATGAGCATTCACCCCATCCAAAGCTAGTGCAAATACCAAATCAACTGAGCCTTTCAAACCAATTTGTTTATAATATTAGGGAACCATAGATAGAGCTGTTTTTTAGAGATTACTGCGAATCATTGTCTCTGAAGATGGAGACAGCTTACCTTTTAGGAATATCAATGGAAGAAATACCTGCATTGAAGAATTCTTGTATTCATAGTTGAAGTATGGCAGAGCAGACATGTCTGTGGATAAGATGAAGCATTTTTGCCACAATATTCTTAGCTTGTATTTAACATTAACCCCTTTTATGTTTCTGTAAACTTTATGGTCTTGAGGAACTTTCTACAGTTTGTTTATATGTTGGAAAGGAGAAAGAACTTGGCATTTTCTTGTACTTTGGGAAATTGAGATTAATTTGAATTGTGCTTTTACTC 2054 39.97 MSLDSFFPEMSLKLHHIDLKGGSGTQKRLKDLSAQSANKYCADCGSPDPKWVSVSFGAFICIKCSGVHRSLGVHISKVLSVKLDDWTDEQVDALTSVGGNTAVNKKYEVCIPDGNKKPKPDSSIEERFDFIRKKYELLQFASLDDQFFCPFPPPQKRNSSLSHSASGTDANQERRNYEKLPTKTRIGSAFRNSWGRKDSEHKNCKKGNANALVLSSSMAGMIEFVGLIKVNVVRGTNLAVRDVVTSDPYVILSLGQQSVKTRVIKSSLNPVWNESLMLSIPDYIPPLKVLVYDKDTFSTDDFMGEAEIDINPLLTAARACERSTMNEPMQLGKWVASKENTLAKDGIISLVDGKIRQDISLKLQNVERGMLEMELECVPLSQ 382
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 27535333 27541140 - XM_039034737.1 Bhi06g01004 37343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g01004 382 MobiDBLite consensus disorder prediction 154 171 - -
Bhi06g01004 382 SMART C2_3c 227 322 IPR000008 -
Bhi06g01004 382 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD11-RELATED 16 382 - -
Bhi06g01004 382 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 16 382 IPR044518 GO:0005096|GO:0005543
Bhi06g01004 382 Gene3D C2 domain 225 381 IPR035892 -
Bhi06g01004 382 CDD C2_ArfGAP 225 369 - -
Bhi06g01004 382 PRINTS HIV Rev interacting protein signature 38 57 IPR001164 GO:0005096
Bhi06g01004 382 PRINTS HIV Rev interacting protein signature 57 74 IPR001164 GO:0005096
Bhi06g01004 382 PRINTS HIV Rev interacting protein signature 78 99 IPR001164 GO:0005096
Bhi06g01004 382 SUPERFAMILY ArfGap/RecO-like zinc finger 26 141 IPR037278 -
Bhi06g01004 382 CDD ArfGap 29 135 - -
Bhi06g01004 382 ProSiteProfiles C2 domain profile. 208 324 IPR000008 -
Bhi06g01004 382 Gene3D Arf GTPase activating protein 14 147 IPR038508 -
Bhi06g01004 382 MobiDBLite consensus disorder prediction 154 175 - -
Bhi06g01004 382 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 225 319 IPR035892 -
Bhi06g01004 382 Pfam C2 domain 227 317 IPR000008 -
Bhi06g01004 382 Pfam Putative GTPase activating protein for Arf 27 141 IPR001164 GO:0005096
Bhi06g01004 382 ProSiteProfiles ARF GTPase-activating proteins domain profile. 26 140 IPR001164 GO:0005096
Bhi06g01004 382 SMART arf_gap_3 26 147 IPR001164 GO:0005096
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g01004 Bhi-Chr6:27535333 Bhi12g01088 Bhi-Chr12:33042113 1.54E-178 dispersed
Bhi06g01004 Bhi-Chr6:27535333 Bhi08g01295 Bhi-Chr8:39537215 1.19E-38 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g01004 K12486 - csv:101221541 721.079