Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi06g01050 CACACACACATTTCCAATTTTCTAAAGCTACCTCTCACCATGGCCACTCTTTCTTGCCGACCTTCCGATTTGGCGCCACTCCTCGGCTCCACAGCCACCACAAATTCCACCGCCATAGCCGAGTTCCTATGCTCAAGATTCACCACCATAGCCACAACTTTCAACTCCACCACCTACGCCGTCGACAACACCTACCTCCTCTTCTCCGCCTACCTCGTCTTCGCCATGCAGCTCGGCTTCGCCATGCTTTGCGCTGGCTCGGTCCGTGCCAAAAACACCATGAACATCATGCTCACCAACGTCCTCGATGCCGCCGCCGGTGGCCTCTCATACTACCTCTTTGGCTTTGCCTTTGCCTTTGGTGCCCCCTCCAACTCCTTCATCGGCCGCCACTTTTTTGACCTCTCCGATATCCCCAACCCCTCCACTGATTATAGCTTCTTTCTCTATCAATGGGCCTTTGCTATTGCTGCTGCAGGCATAACCAGTGGCTCCATAGCTGAGCGAACTCAATTCGTCGCCTACCTCATCTACTCCACTATTCTAACCGGCTTTATCTACCCTATAGTCTCTCACTGGTTCTGGTCTGCTGACGGTTGGGCCAGCCCAACCCGACCCAGTAACCTCCTATTCAACTCAGGTGCAATCGACTTCGCCGGGTCAGGTGTGGTCCACATGGTTGGTGGCATAGCTGGTCTCTGGGGAGCTTTAATCGAAGGCCCACGAATCGGTCGGTTTGACCGATCGGGTCGATCCGTCGCCCTACGTGGTCATAGTGCATCACTCGTAGTCCTTGGCTCCTTCCTCCTTTGGTTTGGCTGGTACGGATTTAACCCCGGCTCATTCCTAACAATCTCCAAATCCTACAATGACGGTCGTCCTTACTACGGACAATGGAGTGCCATAGGTCGAACTGGAGTCACCACAACACTAGCTGGATGCACAGCTGCCTTAACAACCCTCTTTGCAAAGCGCTTATTAGTTGGGCACTGGAATGTAATTGATGTGTGCAACGGTCTCTTAGGCGGGTTTGCCGCCATCACATCCGGTTGCGCCGTTGTGGAGCCATGGGCCGCAGTGATATGTGGATTCGTAGCATCGTGGGTGTTAATTGGGTTAAACAAGCTAGCCGAGAGGGTTAGCTATGACGACCCATTAGAGGCAGCACAATTGCACGGTGGGTGTGGGGCGTGGGGTTTGATATTCACTGGACTATTTGCGACAAAGAAATATGTGGGGGAAGTATATCAAGCTGGGCGACCGTACGGATTGTTGATGGGTGGCGGACGGAAGCTACTGGCAGCACAGGTGGTGGAGATAGTTGCGATTGTCGGGTGGGTGTCTGTGACAATGGGGGGCTTGTTTTATGGGCTAAACAAAGCGAAACTATTGAGAATATCAAGGGAAGATGAAATGGCAGGGATGGATTTAACGAGACATGGGGGGTTTGCTTATGTATATAATGACGAGGAAGATCTATCAGAGAAGCCGTCTGGCTTCATGATGAGAAGGATTGAGCCTACGGATGCTAGTTCTCCTGAGGAGCATACTTCTTCTGGGATGGGGGCTGTTTGATAAAGATTTCAAATCTAGAGTTAATGTGTTTGTCGTAGTTTAGTTGAAACCTCAAGTGTTAACTATTTGTCTCATACTTGTTAGTTGATGTAGAAGTATTCAAAAGAACAATATTAGATTATAAATATACGTTTTGATTCCTTTCTGAAGTTAAA 1730 50.0 MATLSCRPSDLAPLLGSTATTNSTAIAEFLCSRFTTIATTFNSTTYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGAPSNSFIGRHFFDLSDIPNPSTDYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSTILTGFIYPIVSHWFWSADGWASPTRPSNLLFNSGAIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDRSGRSVALRGHSASLVVLGSFLLWFGWYGFNPGSFLTISKSYNDGRPYYGQWSAIGRTGVTTTLAGCTAALTTLFAKRLLVGHWNVIDVCNGLLGGFAAITSGCAVVEPWAAVICGFVASWVLIGLNKLAERVSYDDPLEAAQLHGGCGAWGLIFTGLFATKKYVGEVYQAGRPYGLLMGGGRKLLAAQVVEIVAIVGWVSVTMGGLFYGLNKAKLLRISREDEMAGMDLTRHGGFAYVYNDEEDLSEKPSGFMMRRIEPTDASSPEEHTSSGMGAV 511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 29000896 29003424 + XM_039034761.1 Bhi06g01050 37389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi06g01050 511 ProSitePatterns Ammonium transporters signature. 204 229 IPR018047 GO:0008519|GO:0016020|GO:0072488
Bhi06g01050 511 Gene3D Ammonium transporter AmtB like domains 30 487 IPR029020 -
Bhi06g01050 511 Pfam Ammonium Transporter Family 52 472 IPR024041 GO:0008519|GO:0016020|GO:0072488
Bhi06g01050 511 PANTHER AMMONIUM TRANSPORTER 5 501 - -
Bhi06g01050 511 PANTHER AMMONIUM TRANSPORTER 5 501 - -
Bhi06g01050 511 SUPERFAMILY Ammonium transporter 46 453 - -
Bhi06g01050 511 TIGRFAM amt: ammonium transporter 49 472 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00039 Bhi-Chr1:740159 Bhi06g01050 Bhi-Chr6:29000896 0 dispersed
Bhi05g00153 Bhi-Chr5:3188354 Bhi06g01050 Bhi-Chr6:29000896 0 dispersed
Bhi06g01050 Bhi-Chr6:29000896 Bhi12g01550 Bhi-Chr12:50387940 0 dispersed
Bhi06g01049 Bhi-Chr6:28929135 Bhi06g01050 Bhi-Chr6:29000896 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi06g01050 K03320 K07573 csv:101217871 939.873